| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898551
Identifier: 159898551
GI number: 159898551
Start: 2519603
End: 2520895
Strand: Reverse
Name: 159898551
Synonym: Haur_2027
Alternate gene names: NA
Gene position: 2520895-2519603 (Counterclockwise)
Preceding gene: 159898552
Following gene: 159898550
Centisome position: 39.72
GC content: 50.19
Gene sequence:
>1293_bases ATGCAACAGCTAAGCAAACGCTTGAATATTCCAATTGCAGGGTTATGGTTATTAGCAGCAACCTTTATCACAACCATTGG CAATGGAATGCAAACTTTTACGATCGGGCTTTTACTCTATGATCGAACTGGCTCTGCCGCAGCTTTTGGTGGAGTGATTA TTCTCGAACAGGGCTTAACCTTCTTAATGCAGTTTATTGCAGGACCATGGGTTGACCGCGGTAGTCCCAAACGCACATGT ATTCAGGTTGAAATTATTCGCGGTCTATTTGTCTGTTTTGCCAGCCTGATGCTTGGTGGCGATCAAGTGGTGCTCTGGAT TATGTTGATGACGCTGGTGATTCGGGTGGCCCATCCATTTTATCGGGCGGCTACCTTTGCCCTCGCCCCAGCCGCCATTC CCCGCGATTCGCTTGGGCGCTACAACGGCTATACCAATATTAGCTTGCAAGCCGGTCAATTATTGGGCGTAATTGTTGCC AGCCCAGTGTTCTATTACCTTGGGCCTGCTGTTGCCTTTTTTATCAATGGTTTAACCTTTCTCTTTTCGGCACTTGCGGT TAGTTTTATCCAATTAACTGATCATGAAGTAGTTGCCGAAGCCAAAGCCCAGGTTCAGAATGCTTGGCAACAGATTATTG GCGGTTGGGGTGAGGTGATCGGCTTGCTGCGCCGCGAAGTCGGCTTTATTTGGCATTTGTTGCTCAATACGATTGATGCA GTCGCCGTGCACCTGTTTAATTTGATCGCCGTGCCACTGATTGCTGCCCGCTACAATGGCAGTGTCTATTGGCTCTCAGT AATCGAATGTGCTTATGCAATCGGAGCGATGATCTCTGGTGGCGTGGTGGAGCCACTTTCCAAACGCTGGGGATCGCGTA CCTCAACTATGGTCGGGATTGGCGGGCAAGCCCTGTGTTTTATGCTGCTTGGGTTCTTCAGCAACCAATGGCTCACCATT CTGCTGTGCTTCGGCTTAGGCGCATTCAACACGATCTCGTGGACGGTTTTGATGACCACGCTGCAATTACGGATTCGCGG AGCGATCAAAGGGCGGATTGGAATCACGCGCAATTTGCTAACGTCACTAATCACGGCGATCAGCATTCCATTGATTGCCA GTGCTACCAATAGTTCGCTCAATTGGGCCTTGCTGCTCAGTGGGGCAATTTGTTTCGGCTTTGCTGTACTGGCGTTGGTG CTTGGCAGTCCGCGATTTTTGGGCTGGCGCTTACTTGGCGAAGAACCTGTCGCCGCAACCACCCCAGCTGCTTTAGCGGA AACAAGCTCATGA
Upstream 100 bases:
>100_bases GGCCTGCATGATCGTTGGCGCATTAATCCATTGGCTTGCGCCAAATTCAGCATTGGCCTAACGAATACACAAAAGCGTCT GGAACCCTATTGAGGAACGC
Downstream 100 bases:
>100_bases ACTTAACCACAACAGTGCTCAGCCTGCAACTTGAGCAACCGTTTGTCAGCAATAAGGGCTCGACGACTACGGTGCACCAA GTTGTAATCAAATTAACTTG
Product: major facilitator transporter
Products: NA
Alternate protein names: Macrolide-Efflux Protein
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MQQLSKRLNIPIAGLWLLAATFITTIGNGMQTFTIGLLLYDRTGSAAAFGGVIILEQGLTFLMQFIAGPWVDRGSPKRTC IQVEIIRGLFVCFASLMLGGDQVVLWIMLMTLVIRVAHPFYRAATFALAPAAIPRDSLGRYNGYTNISLQAGQLLGVIVA SPVFYYLGPAVAFFINGLTFLFSALAVSFIQLTDHEVVAEAKAQVQNAWQQIIGGWGEVIGLLRREVGFIWHLLLNTIDA VAVHLFNLIAVPLIAARYNGSVYWLSVIECAYAIGAMISGGVVEPLSKRWGSRTSTMVGIGGQALCFMLLGFFSNQWLTI LLCFGLGAFNTISWTVLMTTLQLRIRGAIKGRIGITRNLLTSLITAISIPLIASATNSSLNWALLLSGAICFGFAVLALV LGSPRFLGWRLLGEEPVAATTPAALAETSS
Sequences:
>Translated_430_residues MQQLSKRLNIPIAGLWLLAATFITTIGNGMQTFTIGLLLYDRTGSAAAFGGVIILEQGLTFLMQFIAGPWVDRGSPKRTC IQVEIIRGLFVCFASLMLGGDQVVLWIMLMTLVIRVAHPFYRAATFALAPAAIPRDSLGRYNGYTNISLQAGQLLGVIVA SPVFYYLGPAVAFFINGLTFLFSALAVSFIQLTDHEVVAEAKAQVQNAWQQIIGGWGEVIGLLRREVGFIWHLLLNTIDA VAVHLFNLIAVPLIAARYNGSVYWLSVIECAYAIGAMISGGVVEPLSKRWGSRTSTMVGIGGQALCFMLLGFFSNQWLTI LLCFGLGAFNTISWTVLMTTLQLRIRGAIKGRIGITRNLLTSLITAISIPLIASATNSSLNWALLLSGAICFGFAVLALV LGSPRFLGWRLLGEEPVAATTPAALAETSS >Mature_430_residues MQQLSKRLNIPIAGLWLLAATFITTIGNGMQTFTIGLLLYDRTGSAAAFGGVIILEQGLTFLMQFIAGPWVDRGSPKRTC IQVEIIRGLFVCFASLMLGGDQVVLWIMLMTLVIRVAHPFYRAATFALAPAAIPRDSLGRYNGYTNISLQAGQLLGVIVA SPVFYYLGPAVAFFINGLTFLFSALAVSFIQLTDHEVVAEAKAQVQNAWQQIIGGWGEVIGLLRREVGFIWHLLLNTIDA VAVHLFNLIAVPLIAARYNGSVYWLSVIECAYAIGAMISGGVVEPLSKRWGSRTSTMVGIGGQALCFMLLGFFSNQWLTI LLCFGLGAFNTISWTVLMTTLQLRIRGAIKGRIGITRNLLTSLITAISIPLIASATNSSLNWALLLSGAICFGFAVLALV LGSPRFLGWRLLGEEPVAATTPAALAETSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46368; Mature: 46368
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLSKRLNIPIAGLWLLAATFITTIGNGMQTFTIGLLLYDRTGSAAAFGGVIILEQGLT CCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCHHHCCHHHHHHHHH FLMQFIAGPWVDRGSPKRTCIQVEIIRGLFVCFASLMLGGDQVVLWIMLMTLVIRVAHPF HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YRAATFALAPAAIPRDSLGRYNGYTNISLQAGQLLGVIVASPVFYYLGPAVAFFINGLTF HHHHHHHHCCCCCCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSALAVSFIQLTDHEVVAEAKAQVQNAWQQIIGGWGEVIGLLRREVGFIWHLLLNTIDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAVHLFNLIAVPLIAARYNGSVYWLSVIECAYAIGAMISGGVVEPLSKRWGSRTSTMVGI HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEC GGQALCFMLLGFFSNQWLTILLCFGLGAFNTISWTVLMTTLQLRIRGAIKGRIGITRNLL CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TSLITAISIPLIASATNSSLNWALLLSGAICFGFAVLALVLGSPRFLGWRLLGEEPVAAT HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC TPAALAETSS CCHHHHCCCC >Mature Secondary Structure MQQLSKRLNIPIAGLWLLAATFITTIGNGMQTFTIGLLLYDRTGSAAAFGGVIILEQGLT CCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCHHHCCHHHHHHHHH FLMQFIAGPWVDRGSPKRTCIQVEIIRGLFVCFASLMLGGDQVVLWIMLMTLVIRVAHPF HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH YRAATFALAPAAIPRDSLGRYNGYTNISLQAGQLLGVIVASPVFYYLGPAVAFFINGLTF HHHHHHHHCCCCCCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFSALAVSFIQLTDHEVVAEAKAQVQNAWQQIIGGWGEVIGLLRREVGFIWHLLLNTIDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VAVHLFNLIAVPLIAARYNGSVYWLSVIECAYAIGAMISGGVVEPLSKRWGSRTSTMVGI HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEC GGQALCFMLLGFFSNQWLTILLCFGLGAFNTISWTVLMTTLQLRIRGAIKGRIGITRNLL CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TSLITAISIPLIASATNSSLNWALLLSGAICFGFAVLALVLGSPRFLGWRLLGEEPVAAT HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC TPAALAETSS CCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA