| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898515
Identifier: 159898515
GI number: 159898515
Start: 2453499
End: 2454674
Strand: Direct
Name: 159898515
Synonym: Haur_1991
Alternate gene names: NA
Gene position: 2453499-2454674 (Clockwise)
Preceding gene: 159898514
Following gene: 159898516
Centisome position: 38.66
GC content: 39.12
Gene sequence:
>1176_bases ATGCCCCAAGAAAAATTTGATCTGTACTTTTTGGCAATGGGTCAGGGTGATTGCACCTTGGTTAAATGCCCCGACGATAA AGTTGTGATGATCGATTGCGGCAGTGATCGTGGCTTTGATGATGATTTAATTACTAGTGGTAGAGCCTTGCTCCGCAATT TGATCGGAGTGACTAACTTAATTGATACAGTGATCCTCACCCATCATGATGGCGATCATTGCAATCAGTTGGGGACCTTC TTGTTTAACGATCCATCTCCGCATGTGCAAATTAACCGTATCTATTACAGTAACCCTTATTCCTATAAAAATGAAACGTT GCGAAATAGATGTCTCCAACGTTATGCGATCAAAGATTTTGTGTTAAAAAAGAAATTTGGCAAACCTTTGATTAACGAGG TGGTCATTAATGAAACAAATTCGTTTGTAAATACATGGAATAATGTTTTAGGGTATGGTAAAAATGACGCAATTAAGAAA AATATTGTGAATAATCGATTAACCATCCTTAGTGGTACGAGTACTGTTGGTAATAAAAATTGGAGTATTAGCATTATTGC TGCTAGTGTTCCGCATGAATCTGGCTCACCAAGTAATGCGATTAATTCGGGATCAATTGTAACCTTACTCGAATTTGATG GCCATAAAGCCTTGATTTGTGGTGACGCAACGATTGATACCGAGCAATTTCTGCTTGATAACCATGATGCAGCCATTGCG AATCTAAAACTTATTCAAGTTCCACATCATGGGTCGGATACGTCTTCATCTCAAGCCTTTGTTAATAAAACTGATCCGAA TGCTGCGGTTATTAGTGTACAGTTTTTGGAACATCATCATCGGCTTCCAAAACGCCAAATTATGCGTCGTTGGACTAATA TTGTGACGGGTGGCAAACCTCAACATGCATTAGATTCGTGGCGCTCGGATGCTCCAGCCTTTAATACATTATCCAACACA ATGCAACAAACGATTAAGAATGAAGAAGATTTTGATGAGGATGATAAAACAATCTTTGTTGGTAGTAATTTCTGGCATTA CCTTGATGATACTGAGGGCGATTATGGAGTTAGTTACCCGAATTGGATGCTTAATCGCGAGGTTTATACCGATAATCTTT GGCAAACCTCGATGCTTGATGGCACGCTCTACTATACTTTTACATTGCCTCTCTAA
Upstream 100 bases:
>100_bases TGATGATTGGTGAGGTTGGTGGTAGCCAAGCCCACGAAAATCGCCCGCCATTCTATGCGCTCGCCTTCATTATGAAAGTT TAATTGAGGAGTTGCCAACT
Downstream 100 bases:
>100_bases ACGCTTATTCTTTCAAGGAGGTAATTTATGGATTTTGCGCAACTAGAGGCAATGTTACAGGCAAGTTTGAGTAATCAGGT GTTTAAATTTGCTCTCAATC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPQEKFDLYFLAMGQGDCTLVKCPDDKVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNLIDTVILTHHDGDHCNQLGTF LFNDPSPHVQINRIYYSNPYSYKNETLRNRCLQRYAIKDFVLKKKFGKPLINEVVINETNSFVNTWNNVLGYGKNDAIKK NIVNNRLTILSGTSTVGNKNWSISIIAASVPHESGSPSNAINSGSIVTLLEFDGHKALICGDATIDTEQFLLDNHDAAIA NLKLIQVPHHGSDTSSSQAFVNKTDPNAAVISVQFLEHHHRLPKRQIMRRWTNIVTGGKPQHALDSWRSDAPAFNTLSNT MQQTIKNEEDFDEDDKTIFVGSNFWHYLDDTEGDYGVSYPNWMLNREVYTDNLWQTSMLDGTLYYTFTLPL
Sequences:
>Translated_391_residues MPQEKFDLYFLAMGQGDCTLVKCPDDKVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNLIDTVILTHHDGDHCNQLGTF LFNDPSPHVQINRIYYSNPYSYKNETLRNRCLQRYAIKDFVLKKKFGKPLINEVVINETNSFVNTWNNVLGYGKNDAIKK NIVNNRLTILSGTSTVGNKNWSISIIAASVPHESGSPSNAINSGSIVTLLEFDGHKALICGDATIDTEQFLLDNHDAAIA NLKLIQVPHHGSDTSSSQAFVNKTDPNAAVISVQFLEHHHRLPKRQIMRRWTNIVTGGKPQHALDSWRSDAPAFNTLSNT MQQTIKNEEDFDEDDKTIFVGSNFWHYLDDTEGDYGVSYPNWMLNREVYTDNLWQTSMLDGTLYYTFTLPL >Mature_390_residues PQEKFDLYFLAMGQGDCTLVKCPDDKVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNLIDTVILTHHDGDHCNQLGTFL FNDPSPHVQINRIYYSNPYSYKNETLRNRCLQRYAIKDFVLKKKFGKPLINEVVINETNSFVNTWNNVLGYGKNDAIKKN IVNNRLTILSGTSTVGNKNWSISIIAASVPHESGSPSNAINSGSIVTLLEFDGHKALICGDATIDTEQFLLDNHDAAIAN LKLIQVPHHGSDTSSSQAFVNKTDPNAAVISVQFLEHHHRLPKRQIMRRWTNIVTGGKPQHALDSWRSDAPAFNTLSNTM QQTIKNEEDFDEDDKTIFVGSNFWHYLDDTEGDYGVSYPNWMLNREVYTDNLWQTSMLDGTLYYTFTLPL
Specific function: Unknown
COG id: COG2333
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44100; Mature: 43969
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQEKFDLYFLAMGQGDCTLVKCPDDKVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNL CCCCCEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHH IDTVILTHHDGDHCNQLGTFLFNDPSPHVQINRIYYSNPYSYKNETLRNRCLQRYAIKDF HHEEEEEECCCHHHHHHCCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH VLKKKFGKPLINEVVINETNSFVNTWNNVLGYGKNDAIKKNIVNNRLTILSGTSTVGNKN HHHHHCCCHHHHHHEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCCCC WSISIIAASVPHESGSPSNAINSGSIVTLLEFDGHKALICGDATIDTEQFLLDNHDAAIA EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHCCCCCCEEE NLKLIQVPHHGSDTSSSQAFVNKTDPNAAVISVQFLEHHHRLPKRQIMRRWTNIVTGGKP EEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCC QHALDSWRSDAPAFNTLSNTMQQTIKNEEDFDEDDKTIFVGSNFWHYLDDTEGDYGVSYP HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCC NWMLNREVYTDNLWQTSMLDGTLYYTFTLPL CEEECCEEECCCCEEEEECCCEEEEEEEECC >Mature Secondary Structure PQEKFDLYFLAMGQGDCTLVKCPDDKVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNL CCCCEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHH IDTVILTHHDGDHCNQLGTFLFNDPSPHVQINRIYYSNPYSYKNETLRNRCLQRYAIKDF HHEEEEEECCCHHHHHHCCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH VLKKKFGKPLINEVVINETNSFVNTWNNVLGYGKNDAIKKNIVNNRLTILSGTSTVGNKN HHHHHCCCHHHHHHEECCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCCCC WSISIIAASVPHESGSPSNAINSGSIVTLLEFDGHKALICGDATIDTEQFLLDNHDAAIA EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHCCCCCCEEE NLKLIQVPHHGSDTSSSQAFVNKTDPNAAVISVQFLEHHHRLPKRQIMRRWTNIVTGGKP EEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCC QHALDSWRSDAPAFNTLSNTMQQTIKNEEDFDEDDKTIFVGSNFWHYLDDTEGDYGVSYP HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCC NWMLNREVYTDNLWQTSMLDGTLYYTFTLPL CEEECCEEECCCCEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA