| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898514
Identifier: 159898514
GI number: 159898514
Start: 2450884
End: 2453481
Strand: Direct
Name: 159898514
Synonym: Haur_1990
Alternate gene names: NA
Gene position: 2450884-2453481 (Clockwise)
Preceding gene: 159898513
Following gene: 159898515
Centisome position: 38.62
GC content: 50.69
Gene sequence:
>2598_bases ATGACAAATCCATTTGCGCAAGCATTAACTCTTTATTTACCACTTGATAGCATGGGCATCAACAACACCAGCGTCAGCGA TCTTTCGGGCAACCGTAATCATGGCACAATTCACGGCAATGTGATGGTTGTGCCTGATGATCAGGTTGGCAGTTGCGCCT GTTTTGATGGTCAAAGTTGGGTCGAGTTAGCCAATCCATTTGCCAGTGCCAGCGATTTTACGCTGGCGTTGTGGGTGCGG CCAACCCGCTTCGATGGAGCCTACCATGGTTTTATTGGCAAGCAAGCCGCCGAAGATTTGTATCGCAAACCAAGTATGTG GGTGATGGGTGATGGTGGTTTGCATCTTGATAGTTACTCGTCTGATGGAACTCGCTTTCATTATGAATTAGCAGGCTTTT TTGCTCAGCCAAATGAGTGGGTGCATGTGGCCTGGGTTAAATCGGGCACGGCCTATACAATCTATCGCAATGGGGTGGCC TTTACCGAACGACCAGCCCCTGCCGAAGTCTATGTGCCAGCCAGTAGCTATTGGCTTGGCAAAGTCGATAATTTGTTTGA TGGATGCTTGGCGCATGTGCGAATGTACAATCAGGCGCTTGATCCTGCTGCGGTGGCCGATATTGCCGCCCATGATCGGG TCGCTCGCATGGTGTTTCGGGCAAGTTATCCGCTTGATTTCAATTTGCTGAATTCGCAGCAAGAGCCAAATCTCAACCCT GGCACAAACCCATTGACCTTGACCCTGACCAATGCCAGCGCCCAAAGCATCGAATTATCGCCGCTTGATCGCAGTGCTCC AGCGCAACAGCAACACTTCAGTTTTAGTTTTCGCCCCAATTTATTGGCAATTAACACTGGAATTGCAATTGATCATCCGG CTTGGCAGGTTAGCACTCAGTCAATGAGCGATGGCCGCATGAATATCCTTGTTCGCTCGACCGAGGCTCAAACGTTAACT CCCAATCAAACCTTGCGCTTTGCACTGAGTGGGATTACGGTTTTGCCTCAAGATGGCAGCCACTCAACCCAAATTGAAAT GCAATATAGTAATTTACGCTATGTTGGTGAAATAAGTCTGTTAAACGGAAGTCGTCTGCAACGCATTAGTATTAGTACCG ATGATAGTGCCTTGGATTTGCCGTTGCACCTGAGTTTGAGCAACGGTGCAACAATTCTCAACACCAACCAGCCCAACCAT TTAGTTGCCCGAATAAGTAACACCTCAACCCATAGCACATTGCACTTTAATCAATCCGAGCCACAGAGCCACTTAATTGT GCGGTTTGATGGCAGTGCCAGTGCTGAGCCATGGGCCTTGGCAACGCCCGACCAAATTAATGCGATTACGATTGAGGTAG CGGGCTGGGATGTGCAACGTCAACAGCAAGCTGGTCAAACGACGTGGGTTTGTCGTCCACTCAGCGATGTGGCTTTGGCT CCAGGCGCAGCGCTTGACTTACAGATCAACAATATCGTGACGACCCACCCGCAAGGCAATACGACCCTGTATGTTGTGGT GCACGAGCTGCAAGGTTTCAACGATACCACCTTAACGACGACAATTACCAAAACCTCGATGAACACTATTAGTAACGCTG GGCAAACTCAAAATACGCTTGCACTTGGCGAAAATGGCTTTATCAGCGGAGCGGGCTACAACACCTTGGTAGCTCAAACG ACACTGAGCGGTGGTGGTCGAATTAGCTGGCGCAACCGTAAAGTTCGCTGGACGCAGCGCTTTTTGGCGATTAGTATGGG GCATACTGGCTTTCCGGTTGGACACTTTAATATTGCATATCCAACTGCACCAATTCCTGCTGCCGATTGCTACGATAACC TCGAACGACCAGTGAGTGATGGCATCGAATTGCGTGATTGGGAAGCGTTATATGCGATTTATACTCCCAGCACCAGCCCC AGTACCACCAGTTTACGAATTGTGCATTATGCCAAGCCTTTCAATCTTGAAGGCCGGGCAGTGCTGGTGGCCGTTTTTAA TGCTGATGATCGCACCTTGAAGCTTGGCTCTGGCCTGACGTTGAGCCATCAAGGAACCTATTCCAATGGCAGCCCAATTC CATGTGGCACCATTCAAATGTGGTCGGGCATGGAAGTGCCTGAAGGCTGGGCGATTTGTGATGGCCGCGAAGCCAACGGC TTGCGCACCCCTGATTTGCGCAACCGCTTTATTGTTGGAGCTGGGGCCAATTACGATAGTGGCAACCTCAGTGTTTATGG TACGAATCAAGGTACAACTGGCGGCAGCGATGTAGTGGCATTAACCCTCGATCAAATGCCGCGCCACACCCATGGCGGTT CAACCAATGCCGCAGGCGACCATAGCCATTGGGTTGAAGGCACTGATGCCGATGGCTTAGCCAAACGTCGCCGTCACCAT TGGGGCGATACTACCGTCGATATGGGTTTTGGTGGTGGCCGCAACGCCGACCCTAACGATGAACGCTGGCGTGGCCGGGT CAATACCGATAATGCTGGTACCCATAGCCACGGCCTGATGATTGGTGAGGTTGGTGGTAGCCAAGCCCACGAAAATCGCC CGCCATTCTATGCGCTCGCCTTCATTATGAAAGTTTAA
Upstream 100 bases:
>100_bases TGGCCAAGCCAGCTTTGCCCGCCGCTTACAACTGCGCGAAGGGTGGCTCCGGCTGCAACCGCAAGCTCAGCAAATTTAGC TTTTAGGAGCATTATTAATT
Downstream 100 bases:
>100_bases TTGAGGAGTTGCCAACTATGCCCCAAGAAAAATTTGATCTGTACTTTTTGGCAATGGGTCAGGGTGATTGCACCTTGGTT AAATGCCCCGACGATAAAGT
Product: tail collar domain-containing protein
Products: NA
Alternate protein names: Phage Tail Collar Domain Family; Phage Tail Protein
Number of amino acids: Translated: 865; Mature: 864
Protein sequence:
>865_residues MTNPFAQALTLYLPLDSMGINNTSVSDLSGNRNHGTIHGNVMVVPDDQVGSCACFDGQSWVELANPFASASDFTLALWVR PTRFDGAYHGFIGKQAAEDLYRKPSMWVMGDGGLHLDSYSSDGTRFHYELAGFFAQPNEWVHVAWVKSGTAYTIYRNGVA FTERPAPAEVYVPASSYWLGKVDNLFDGCLAHVRMYNQALDPAAVADIAAHDRVARMVFRASYPLDFNLLNSQQEPNLNP GTNPLTLTLTNASAQSIELSPLDRSAPAQQQHFSFSFRPNLLAINTGIAIDHPAWQVSTQSMSDGRMNILVRSTEAQTLT PNQTLRFALSGITVLPQDGSHSTQIEMQYSNLRYVGEISLLNGSRLQRISISTDDSALDLPLHLSLSNGATILNTNQPNH LVARISNTSTHSTLHFNQSEPQSHLIVRFDGSASAEPWALATPDQINAITIEVAGWDVQRQQQAGQTTWVCRPLSDVALA PGAALDLQINNIVTTHPQGNTTLYVVVHELQGFNDTTLTTTITKTSMNTISNAGQTQNTLALGENGFISGAGYNTLVAQT TLSGGGRISWRNRKVRWTQRFLAISMGHTGFPVGHFNIAYPTAPIPAADCYDNLERPVSDGIELRDWEALYAIYTPSTSP STTSLRIVHYAKPFNLEGRAVLVAVFNADDRTLKLGSGLTLSHQGTYSNGSPIPCGTIQMWSGMEVPEGWAICDGREANG LRTPDLRNRFIVGAGANYDSGNLSVYGTNQGTTGGSDVVALTLDQMPRHTHGGSTNAAGDHSHWVEGTDADGLAKRRRHH WGDTTVDMGFGGGRNADPNDERWRGRVNTDNAGTHSHGLMIGEVGGSQAHENRPPFYALAFIMKV
Sequences:
>Translated_865_residues MTNPFAQALTLYLPLDSMGINNTSVSDLSGNRNHGTIHGNVMVVPDDQVGSCACFDGQSWVELANPFASASDFTLALWVR PTRFDGAYHGFIGKQAAEDLYRKPSMWVMGDGGLHLDSYSSDGTRFHYELAGFFAQPNEWVHVAWVKSGTAYTIYRNGVA FTERPAPAEVYVPASSYWLGKVDNLFDGCLAHVRMYNQALDPAAVADIAAHDRVARMVFRASYPLDFNLLNSQQEPNLNP GTNPLTLTLTNASAQSIELSPLDRSAPAQQQHFSFSFRPNLLAINTGIAIDHPAWQVSTQSMSDGRMNILVRSTEAQTLT PNQTLRFALSGITVLPQDGSHSTQIEMQYSNLRYVGEISLLNGSRLQRISISTDDSALDLPLHLSLSNGATILNTNQPNH LVARISNTSTHSTLHFNQSEPQSHLIVRFDGSASAEPWALATPDQINAITIEVAGWDVQRQQQAGQTTWVCRPLSDVALA PGAALDLQINNIVTTHPQGNTTLYVVVHELQGFNDTTLTTTITKTSMNTISNAGQTQNTLALGENGFISGAGYNTLVAQT TLSGGGRISWRNRKVRWTQRFLAISMGHTGFPVGHFNIAYPTAPIPAADCYDNLERPVSDGIELRDWEALYAIYTPSTSP STTSLRIVHYAKPFNLEGRAVLVAVFNADDRTLKLGSGLTLSHQGTYSNGSPIPCGTIQMWSGMEVPEGWAICDGREANG LRTPDLRNRFIVGAGANYDSGNLSVYGTNQGTTGGSDVVALTLDQMPRHTHGGSTNAAGDHSHWVEGTDADGLAKRRRHH WGDTTVDMGFGGGRNADPNDERWRGRVNTDNAGTHSHGLMIGEVGGSQAHENRPPFYALAFIMKV >Mature_864_residues TNPFAQALTLYLPLDSMGINNTSVSDLSGNRNHGTIHGNVMVVPDDQVGSCACFDGQSWVELANPFASASDFTLALWVRP TRFDGAYHGFIGKQAAEDLYRKPSMWVMGDGGLHLDSYSSDGTRFHYELAGFFAQPNEWVHVAWVKSGTAYTIYRNGVAF TERPAPAEVYVPASSYWLGKVDNLFDGCLAHVRMYNQALDPAAVADIAAHDRVARMVFRASYPLDFNLLNSQQEPNLNPG TNPLTLTLTNASAQSIELSPLDRSAPAQQQHFSFSFRPNLLAINTGIAIDHPAWQVSTQSMSDGRMNILVRSTEAQTLTP NQTLRFALSGITVLPQDGSHSTQIEMQYSNLRYVGEISLLNGSRLQRISISTDDSALDLPLHLSLSNGATILNTNQPNHL VARISNTSTHSTLHFNQSEPQSHLIVRFDGSASAEPWALATPDQINAITIEVAGWDVQRQQQAGQTTWVCRPLSDVALAP GAALDLQINNIVTTHPQGNTTLYVVVHELQGFNDTTLTTTITKTSMNTISNAGQTQNTLALGENGFISGAGYNTLVAQTT LSGGGRISWRNRKVRWTQRFLAISMGHTGFPVGHFNIAYPTAPIPAADCYDNLERPVSDGIELRDWEALYAIYTPSTSPS TTSLRIVHYAKPFNLEGRAVLVAVFNADDRTLKLGSGLTLSHQGTYSNGSPIPCGTIQMWSGMEVPEGWAICDGREANGL RTPDLRNRFIVGAGANYDSGNLSVYGTNQGTTGGSDVVALTLDQMPRHTHGGSTNAAGDHSHWVEGTDADGLAKRRRHHW GDTTVDMGFGGGRNADPNDERWRGRVNTDNAGTHSHGLMIGEVGGSQAHENRPPFYALAFIMKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94008; Mature: 93876
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPFAQALTLYLPLDSMGINNTSVSDLSGNRNHGTIHGNVMVVPDDQVGSCACFDGQSW CCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCH VELANPFASASDFTLALWVRPTRFDGAYHGFIGKQAAEDLYRKPSMWVMGDGGLHLDSYS HHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEECCCC SDGTRFHYELAGFFAQPNEWVHVAWVKSGTAYTIYRNGVAFTERPAPAEVYVPASSYWLG CCCCEEEEEEEEEECCCCCEEEEEEEECCCEEEEEECCEEEECCCCCCEEEECCCCCCCC KVDNLFDGCLAHVRMYNQALDPAAVADIAAHDRVARMVFRASYPLDFNLLNSQQEPNLNP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC GTNPLTLTLTNASAQSIELSPLDRSAPAQQQHFSFSFRPNLLAINTGIAIDHPAWQVSTQ CCCEEEEEEECCCCCEEEECCCCCCCCCCHHHEEEEECCCEEEEECCEEECCCCEEEECC SMSDGRMNILVRSTEAQTLTPNQTLRFALSGITVLPQDGSHSTQIEMQYSNLRYVGEISL CCCCCEEEEEEEECCCCEECCCCEEEEEEECEEEEECCCCCCEEEEEEECCEEEEEEEEE LNGSRLQRISISTDDSALDLPLHLSLSNGATILNTNQPNHLVARISNTSTHSTLHFNQSE ECCCCEEEEEECCCCCEEEEEEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEECCCC PQSHLIVRFDGSASAEPWALATPDQINAITIEVAGWDVQRQQQAGQTTWVCRPLSDVALA CCCEEEEEECCCCCCCCEEECCCCCCCEEEEEEECCCHHHHHHCCCEEEEEECCHHHHCC PGAALDLQINNIVTTHPQGNTTLYVVVHELQGFNDTTLTTTITKTSMNTISNAGQTQNTL CCCEEEEEECCEEEECCCCCEEEEEEEEECCCCCCCEEEEEEEECHHHHHHCCCCCCCEE ALGENGFISGAGYNTLVAQTTLSGGGRISWRNRKVRWTQRFLAISMGHTGFPVGHFNIAY EECCCCEEECCCCCEEEEEEECCCCCEEEECCCEEEEEEEEEEEEECCCCCCCCEEEEEC PTAPIPAADCYDNLERPVSDGIELRDWEALYAIYTPSTSPSTTSLRIVHYAKPFNLEGRA CCCCCCHHHHHHHHCCHHHCCCEEEECEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCE VLVAVFNADDRTLKLGSGLTLSHQGTYSNGSPIPCGTIQMWSGMEVPEGWAICDGREANG EEEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCC LRTPDLRNRFIVGAGANYDSGNLSVYGTNQGTTGGSDVVALTLDQMPRHTHGGSTNAAGD CCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC HSHWVEGTDADGLAKRRRHHWGDTTVDMGFGGGRNADPNDERWRGRVNTDNAGTHSHGLM CCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEE IGEVGGSQAHENRPPFYALAFIMKV EECCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TNPFAQALTLYLPLDSMGINNTSVSDLSGNRNHGTIHGNVMVVPDDQVGSCACFDGQSW CCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCH VELANPFASASDFTLALWVRPTRFDGAYHGFIGKQAAEDLYRKPSMWVMGDGGLHLDSYS HHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEECCCC SDGTRFHYELAGFFAQPNEWVHVAWVKSGTAYTIYRNGVAFTERPAPAEVYVPASSYWLG CCCCEEEEEEEEEECCCCCEEEEEEEECCCEEEEEECCEEEECCCCCCEEEECCCCCCCC KVDNLFDGCLAHVRMYNQALDPAAVADIAAHDRVARMVFRASYPLDFNLLNSQQEPNLNP CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC GTNPLTLTLTNASAQSIELSPLDRSAPAQQQHFSFSFRPNLLAINTGIAIDHPAWQVSTQ CCCEEEEEEECCCCCEEEECCCCCCCCCCHHHEEEEECCCEEEEECCEEECCCCEEEECC SMSDGRMNILVRSTEAQTLTPNQTLRFALSGITVLPQDGSHSTQIEMQYSNLRYVGEISL CCCCCEEEEEEEECCCCEECCCCEEEEEEECEEEEECCCCCCEEEEEEECCEEEEEEEEE LNGSRLQRISISTDDSALDLPLHLSLSNGATILNTNQPNHLVARISNTSTHSTLHFNQSE ECCCCEEEEEECCCCCEEEEEEEEEECCCEEEEECCCCCEEEEEEECCCCCEEEEECCCC PQSHLIVRFDGSASAEPWALATPDQINAITIEVAGWDVQRQQQAGQTTWVCRPLSDVALA CCCEEEEEECCCCCCCCEEECCCCCCCEEEEEEECCCHHHHHHCCCEEEEEECCHHHHCC PGAALDLQINNIVTTHPQGNTTLYVVVHELQGFNDTTLTTTITKTSMNTISNAGQTQNTL CCCEEEEEECCEEEECCCCCEEEEEEEEECCCCCCCEEEEEEEECHHHHHHCCCCCCCEE ALGENGFISGAGYNTLVAQTTLSGGGRISWRNRKVRWTQRFLAISMGHTGFPVGHFNIAY EECCCCEEECCCCCEEEEEEECCCCCEEEECCCEEEEEEEEEEEEECCCCCCCCEEEEEC PTAPIPAADCYDNLERPVSDGIELRDWEALYAIYTPSTSPSTTSLRIVHYAKPFNLEGRA CCCCCCHHHHHHHHCCHHHCCCEEEECEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCE VLVAVFNADDRTLKLGSGLTLSHQGTYSNGSPIPCGTIQMWSGMEVPEGWAICDGREANG EEEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCC LRTPDLRNRFIVGAGANYDSGNLSVYGTNQGTTGGSDVVALTLDQMPRHTHGGSTNAAGD CCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC HSHWVEGTDADGLAKRRRHHWGDTTVDMGFGGGRNADPNDERWRGRVNTDNAGTHSHGLM CCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEE IGEVGGSQAHENRPPFYALAFIMKV EECCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA