| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898494
Identifier: 159898494
GI number: 159898494
Start: 2415151
End: 2417355
Strand: Reverse
Name: 159898494
Synonym: Haur_1970
Alternate gene names: NA
Gene position: 2417355-2415151 (Counterclockwise)
Preceding gene: 159898501
Following gene: 159898493
Centisome position: 38.09
GC content: 50.88
Gene sequence:
>2205_bases ATGCGTCTTGGTCGTTCATGGATGATCATCGTTGCAGTTATGATCATTGCGCTGCTCAGTGTGATCACTGCAACCGCCAT GGTCAGCCCCAGTGTCAGCTCATCGGATGGGCTTTGGCAGAATGTTGCTGAACAGGACATTCAACAAAAAGGCTCACGCG AAATCATTCCAGTAGTGTATCGCACGGTCGCCTTGGATCTTAATTTGCTACAACAACACTTACGTCAAGTGCCTCAAGAA GCCCAAACCAAGGTGCAAAAATCTGGCTTTATGTTAGATTTACCGCTACCAGATGGCCAATTTGGCAAATTTCGCGTCGT CGAATCGCCAATTATGGCTCCCGAATTAGCCGCCAAGTTTCCTGAAATTCGCACCTTCTTGGCCCAATCAGTTGATCAGC CTGCAACCAGCGCTCGGCTTGATATCACGCCACGCGGCTTTCATGGCATGATCTTGAGCGAATCAGGTCGGATTTTTATC GATCCATATAGCCGCAATGATACGGCTAACTATATTGTGTACGATGCTCGCAATTTTGTGGCCGACCCTAGCAAATTGGC CGAACGGACTGGCAACGATTACGAGCCAAATCCATTAGGAAATCCATCGTCGATCATTCCTGAACGCTACTCGATTGGTG AAACCTTGCGCACCTATCGCTTGGCCATGGCTGCCACTGGCGAATACACCGCATTCCACGGTGGCACGGTCAATGGCGCG ATGGCGGCAATCGTCACCAGCATGAATCGGGTTAACGGAATCTACGAACGCGATCTTTCAGTGCGCATGCAATTAATCGC CAACAATGATCTGATTGTGTATACCAATGCGAGCAGCGACCCCTATACCAACAATAGTGGTGGTACGATGCTTGGCCAAA ACCAAACCAATTTGACCAACGTGATTGGCGGGGCCAACTATGATATTGGCCACGTGTTCAGCACTGGCGGCGGTGGGGTC GCTACTTTACAATCAGTCTGTTCTTCAGGCAGCAAAGCGCGTGGGGTTACTGGCTCAGGCTCACCAGTTGGCGATGCCTT CGATGTCGATTATGTCGCGCACGAAATTGGTCACCAATTTGGTGGTCTTCACACCTTCAATGGCTCAACTGGCAGTTGTA GTGGTGGCAATCGTTCCAGCAGCGCTGCCTACGAACCAGGTAGTGGTACAACCATTATGGCTTATGCCGGGATTTGTGGC TCGGAAAACTTGCAACCAAACAGCGACTTCGACTTCCACGTCAAGAGCTTAGAAGAAATTTCAGCCTTCATCACCACTGG CGGCGGCGCAACCTGTGGCACAACTCAAGCCACTGGCAATACCCCACCAGTCGCCAATGCAGGCAGCGATTACACCATCC CAGCCAATACGCCATTCGAATTGACTGCTAGCGCTAACGATGCTGAAGACAATAGTTTGACCTACGATTGGGAACAATAC GATTTGGGTGCGGCCTCACCACCAAACACCGATAACGGCAATCGCCCAATCTTCCGTAGCTTCAATTCAACCGCCAGCAA TGTGCGTACCTTGCCAAAACTGAGCGATATTTTGAACAATACCACGACGATTGGCGAATCGTTGCCAACTACTAACCGCA ACCTGACCTTCCGCTTGACCGTGCGTGATAACCACGCTGGGGCTGGTGGTTATGGCTTGGATACGGCGGTTCTGACTGTC AACAATACTGCTGGACCATTCTTGGTAACTGCACCAAACACGGCAATCGCCTGGACAGGCGGCGCGAACGAGTCGGTCAC GTGGAATGTTGCCAACACCACCGCTGCGCCAATTAGCTGTGCTAATGTTGATATTTTGCTCTCGAAAGATGGCGGCACAA GCTTTGAAGCCTTGGTCAGCAACACCCCCAACGATGGCGATGAAACTGTTGTTGCGCCAAACGTTAATGCTGCTGCTGCG CGGATCAAAGTGCGTTGTGCTAACAATATCTTCTTTGATATTTCTAACGCCAACTTTGCGATCAACGGGGTCAATATCAC ACCAACTCCAGTTACACCAACATTAACCCCAACCAATACTCCCACTCGCACGCCAACATTAACCCCAACTCAAACATCAA CCCCAACCCAAACCGCGACGGCGACCCCAACAGCTAGCCCAACCGTCAGCGTTACGCCGACGGCGAGCGTTACACCAACC CCTGAGAACTATAGCGTTTATCTGCCTGTCGCAATCAAAAATTAA
Upstream 100 bases:
>100_bases GGCTTTTTTTATAAACTAAGGTTGGTTGCATGCCCGCTTGCTTTAAGACCTGTTAATTAATTGTATAATGGGCCATGCTG TTTTGTGGAAAGGAATACCT
Downstream 100 bases:
>100_bases ACCATCCAACTCCCCAATTGTACGTAGTATGCTGCGTACAATTGGGGAGTTTTTTATGCCTGTGATTTGTTGGTTCCGCC GCGATTTACGCCTAACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVYRTVALDLNLLQQHLRQVPQE AQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKFPEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFI DPYSRNDTANYIVYDARNFVADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTNVIGGANYDIGHVFSTGGGGV ATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQFGGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICG SENLQPNSDFDFHVKSLEEISAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLTVRDNHAGAGGYGLDTAVLTV NNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISCANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAA RIKVRCANNIFFDISNANFAINGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT PENYSVYLPVAIKN
Sequences:
>Translated_734_residues MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVYRTVALDLNLLQQHLRQVPQE AQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKFPEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFI DPYSRNDTANYIVYDARNFVADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTNVIGGANYDIGHVFSTGGGGV ATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQFGGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICG SENLQPNSDFDFHVKSLEEISAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLTVRDNHAGAGGYGLDTAVLTV NNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISCANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAA RIKVRCANNIFFDISNANFAINGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT PENYSVYLPVAIKN >Mature_734_residues MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVYRTVALDLNLLQQHLRQVPQE AQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKFPEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFI DPYSRNDTANYIVYDARNFVADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTNVIGGANYDIGHVFSTGGGGV ATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQFGGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICG SENLQPNSDFDFHVKSLEEISAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLTVRDNHAGAGGYGLDTAVLTV NNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISCANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAA RIKVRCANNIFFDISNANFAINGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT PENYSVYLPVAIKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77366; Mature: 77366
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVY CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH RTVALDLNLLQQHLRQVPQEAQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKF HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHC PEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFIDPYSRNDTANYIVYDARNFV HHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECCHHC ADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA CCHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCHH MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTN HHHHHHHHHHHCCHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCHHH VIGGANYDIGHVFSTGGGGVATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQF HHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICGSENLQPNSDFDFHVKSLEEI CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHH SAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEHHHC DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLT CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEE VRDNHAGAGGYGLDTAVLTVNNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISC EECCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCEEE ANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAARIKVRCANNIFFDISNANFA CCEEEEEECCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEECCEEEEECCCCEE INGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT EECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCC PENYSVYLPVAIKN CCCEEEEEEEEECC >Mature Secondary Structure MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVY CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH RTVALDLNLLQQHLRQVPQEAQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKF HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHC PEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFIDPYSRNDTANYIVYDARNFV HHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECCHHC ADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA CCHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCHH MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTN HHHHHHHHHHHCCHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCHHH VIGGANYDIGHVFSTGGGGVATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQF HHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH GGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICGSENLQPNSDFDFHVKSLEEI CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHH SAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEHHHC DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLT CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEE VRDNHAGAGGYGLDTAVLTVNNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISC EECCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCEEE ANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAARIKVRCANNIFFDISNANFA CCEEEEEECCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEECCEEEEECCCCEE INGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT EECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCC PENYSVYLPVAIKN CCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA