Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 159898489

GI number: 159898489

Start: 2401925

End: 2402545

Strand: Direct

Name: uidR [C]

Synonym: Haur_1965

Alternate gene names: 159898489

Gene position: 2401925-2402545 (Clockwise)

Preceding gene: 159898488

Following gene: 159898490

Centisome position: 37.85

GC content: 51.21

Gene sequence:

>621_bases
ATGGCAACCCAAAACCCTGAAGCATCGCTCAACCAACGCCGCCGAAGCCAAATTCTTGATGCTGCTGCCCAGGTGTTTGC
TCAGCAAGGCTTTCATCAAACCACGATTCGCCAAGTTGCCAAGGCCGCAGGCATTGCTGATGGCACAATTTATCTCTATT
TTGCCAGCAAGCACGAGTTACTACTAGGGATTTTGGAGCGTTTGAACGATCGCGAACAACGAGAAATTGATTTCACCCAA
GCTCTGGATAGTCGGCCCAGTGGTTTTATTGCCAGCTATTTCGAAGAACGGGTGGGGCGGCTGATGGAGCAAATGACTGA
TTTGCAGGCAGCTCTGCCAGCGGTGCTGAGCGATGTAAGTCTGCGCGAGCGGTATTTTCGCGAAATTTTTGGCCCAACCT
TTGAGCTTGCCAATCCAGTTGTCCAGTTATGGATTGATCAGGGGATTTTGCGGCCAGCCCAAGCTGAATTATTGACCCGC
TCGCTGGCAAGCAGCATCCTTGGTTTGGTGCTCTTGCGCATGTTGGGCGATGAGGTTGCCATCAATCAATGGCCTGAATT
AGCTCGTACCACCATCAATTTGGTGTTGTATGGCATTCTCCAGGAGCCGCCACATGAGTAG

Upstream 100 bases:

>100_bases
CTAAAAATAACATGGATCAAGAACTGATTGACAATCAATATACTTAATTCTATACTCATAGCAAAATGAATGAATGTTCA
TTCATTTTATAGGAACCTGT

Downstream 100 bases:

>100_bases
TGTATCGCGTGAAACCAAGCCCACTCAACCAGTCTTGAATTTGACTGATCGCCAATTCAAGGCTGATCCGTTTAGTATTT
ATGCTCAGTTACGCCGTGAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MATQNPEASLNQRRRSQILDAAAQVFAQQGFHQTTIRQVAKAAGIADGTIYLYFASKHELLLGILERLNDREQREIDFTQ
ALDSRPSGFIASYFEERVGRLMEQMTDLQAALPAVLSDVSLRERYFREIFGPTFELANPVVQLWIDQGILRPAQAELLTR
SLASSILGLVLLRMLGDEVAINQWPELARTTINLVLYGILQEPPHE

Sequences:

>Translated_206_residues
MATQNPEASLNQRRRSQILDAAAQVFAQQGFHQTTIRQVAKAAGIADGTIYLYFASKHELLLGILERLNDREQREIDFTQ
ALDSRPSGFIASYFEERVGRLMEQMTDLQAALPAVLSDVSLRERYFREIFGPTFELANPVVQLWIDQGILRPAQAELLTR
SLASSILGLVLLRMLGDEVAINQWPELARTTINLVLYGILQEPPHE
>Mature_205_residues
ATQNPEASLNQRRRSQILDAAAQVFAQQGFHQTTIRQVAKAAGIADGTIYLYFASKHELLLGILERLNDREQREIDFTQA
LDSRPSGFIASYFEERVGRLMEQMTDLQAALPAVLSDVSLRERYFREIFGPTFELANPVVQLWIDQGILRPAQAELLTRS
LASSILGLVLLRMLGDEVAINQWPELARTTINLVLYGILQEPPHE

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23235; Mature: 23104

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQNPEASLNQRRRSQILDAAAQVFAQQGFHQTTIRQVAKAAGIADGTIYLYFASKHEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHH
LLGILERLNDREQREIDFTQALDSRPSGFIASYFEERVGRLMEQMTDLQAALPAVLSDVS
HHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRERYFREIFGPTFELANPVVQLWIDQGILRPAQAELLTRSLASSILGLVLLRMLGDEVA
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
INQWPELARTTINLVLYGILQEPPHE
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATQNPEASLNQRRRSQILDAAAQVFAQQGFHQTTIRQVAKAAGIADGTIYLYFASKHEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHH
LLGILERLNDREQREIDFTQALDSRPSGFIASYFEERVGRLMEQMTDLQAALPAVLSDVS
HHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRERYFREIFGPTFELANPVVQLWIDQGILRPAQAELLTRSLASSILGLVLLRMLGDEVA
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
INQWPELARTTINLVLYGILQEPPHE
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA