| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pksS [H]
Identifier: 159898490
GI number: 159898490
Start: 2402538
End: 2403773
Strand: Direct
Name: pksS [H]
Synonym: Haur_1966
Alternate gene names: 159898490
Gene position: 2402538-2403773 (Clockwise)
Preceding gene: 159898489
Following gene: 159898492
Centisome position: 37.86
GC content: 49.76
Gene sequence:
>1236_bases ATGAGTAGTGTATCGCGTGAAACCAAGCCCACTCAACCAGTCTTGAATTTGACTGATCGCCAATTCAAGGCTGATCCGTT TAGTATTTATGCTCAGTTACGCCGTGATAATCCAGTTGCTAAAGCTAAACTTGGCTCGCTGCCGACATGGATTGTTACCC GCTACGATGATGTCGTTGAAATTTTGAAAAACGATCGGGTCTTTGTCAAAAACTATAAGAATGCCCAATCGTTGGAGCAA CAACGCAAACGCCCATGGATGCCCGCATCGCTTCGAGCGCTCGAAAGCAATATGCTCGATCAAGATAACCCTGACCATCT GCGCTTACGTTCATTGGTCCACAAAGCTTTTACCCCTCAGCGCATGGAAGAAATGCGGCCACGCATTCAGTCAATTGCTG AATCATTATTAATCAGCAGCCAACAACGTGGTCGCGGCGATTTGATTGCCGATTTTGCCTTGCCCCTGCCTTTGACCGTG ATCGTCGAATTGCTTGGCATTCCAACTGAGGATCGCCAAAAATTTCATCGTTGGGCCAAATATGTACTGAACAGCCCAAC CATGCTGAATATGCTATTGGCAATTCCGGCAATTATGGCTCAGATGAAATATCTCAAACAACTTTTTGCCAAGCGGCGCA GCAACCCCCAAGACGATTTGCTGACGGCGTTGGTGCAAGCTGAGGCCGATGGTGATCGTTTCAGTGAAGATGAATTAGTC GCCATGGTCTTTTTGCTGATGCTCGCAGGCCACGAAACCACGGTCAATCTGATTTCATCGGGAACCCTAGCGTTATTGCA GCATCCTGAGCAGTTGGCCTTGTTGCGACGTTCGCCAGAGTTGATCAAATCGGCAGTTGAGGAATTGGTGCGGTTTACTG CGCCAGTTGAAACCGCGACCGAGCGCTACGCTGCTGAAGATGTGATTATTGCCGACACCAAGATTGCCAAAGGCGAAATG GTTTTGGTCGCGCTGGCCTCAGCCAATCGGGATGAACGCCAATTTACTAACCCTGATCAACTCGACATAACCCGAGAAAA GAATCGCCATGTTGGTTTTGGTTTGGGCATTCACTATTGCTTAGGTGCGCCTTTAGCCCGCATGGAAGCCCAAATTGGCC TGCAATTATTGACTGATCTGCGCCCAAACTTGCGCTTAGCCGTGCCCGCTGAGCAGTTGCGTTGGCGTTCGACCGCAGTT GTGCGCGGCCTCGAAGCCTTGCCTGTGGAGTGGTAA
Upstream 100 bases:
>100_bases TTGCGCATGTTGGGCGATGAGGTTGCCATCAATCAATGGCCTGAATTAGCTCGTACCACCATCAATTTGGTGTTGTATGG CATTCTCCAGGAGCCGCCAC
Downstream 100 bases:
>100_bases GTTCTGGTTGGGGTATGGCGAGCATAATGGAATGGCTCGCCATACCCTTATTATAGAATTTGCCGATTAAATTCAATTCA ATGTCTCAAAACTTAGCGGT
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSSVSRETKPTQPVLNLTDRQFKADPFSIYAQLRRDNPVAKAKLGSLPTWIVTRYDDVVEILKNDRVFVKNYKNAQSLEQ QRKRPWMPASLRALESNMLDQDNPDHLRLRSLVHKAFTPQRMEEMRPRIQSIAESLLISSQQRGRGDLIADFALPLPLTV IVELLGIPTEDRQKFHRWAKYVLNSPTMLNMLLAIPAIMAQMKYLKQLFAKRRSNPQDDLLTALVQAEADGDRFSEDELV AMVFLLMLAGHETTVNLISSGTLALLQHPEQLALLRRSPELIKSAVEELVRFTAPVETATERYAAEDVIIADTKIAKGEM VLVALASANRDERQFTNPDQLDITREKNRHVGFGLGIHYCLGAPLARMEAQIGLQLLTDLRPNLRLAVPAEQLRWRSTAV VRGLEALPVEW
Sequences:
>Translated_411_residues MSSVSRETKPTQPVLNLTDRQFKADPFSIYAQLRRDNPVAKAKLGSLPTWIVTRYDDVVEILKNDRVFVKNYKNAQSLEQ QRKRPWMPASLRALESNMLDQDNPDHLRLRSLVHKAFTPQRMEEMRPRIQSIAESLLISSQQRGRGDLIADFALPLPLTV IVELLGIPTEDRQKFHRWAKYVLNSPTMLNMLLAIPAIMAQMKYLKQLFAKRRSNPQDDLLTALVQAEADGDRFSEDELV AMVFLLMLAGHETTVNLISSGTLALLQHPEQLALLRRSPELIKSAVEELVRFTAPVETATERYAAEDVIIADTKIAKGEM VLVALASANRDERQFTNPDQLDITREKNRHVGFGLGIHYCLGAPLARMEAQIGLQLLTDLRPNLRLAVPAEQLRWRSTAV VRGLEALPVEW >Mature_410_residues SSVSRETKPTQPVLNLTDRQFKADPFSIYAQLRRDNPVAKAKLGSLPTWIVTRYDDVVEILKNDRVFVKNYKNAQSLEQQ RKRPWMPASLRALESNMLDQDNPDHLRLRSLVHKAFTPQRMEEMRPRIQSIAESLLISSQQRGRGDLIADFALPLPLTVI VELLGIPTEDRQKFHRWAKYVLNSPTMLNMLLAIPAIMAQMKYLKQLFAKRRSNPQDDLLTALVQAEADGDRFSEDELVA MVFLLMLAGHETTVNLISSGTLALLQHPEQLALLRRSPELIKSAVEELVRFTAPVETATERYAAEDVIIADTKIAKGEMV LVALASANRDERQFTNPDQLDITREKNRHVGFGLGIHYCLGAPLARMEAQIGLQLLTDLRPNLRLAVPAEQLRWRSTAVV RGLEALPVEW
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI98991773, Length=229, Percent_Identity=27.0742358078603, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46594; Mature: 46462
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSRETKPTQPVLNLTDRQFKADPFSIYAQLRRDNPVAKAKLGSLPTWIVTRYDDVVE CCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHH ILKNDRVFVKNYKNAQSLEQQRKRPWMPASLRALESNMLDQDNPDHLRLRSLVHKAFTPQ HHHCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH RMEEMRPRIQSIAESLLISSQQRGRGDLIADFALPLPLTVIVELLGIPTEDRQKFHRWAK HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH YVLNSPTMLNMLLAIPAIMAQMKYLKQLFAKRRSNPQDDLLTALVQAEADGDRFSEDELV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHH AMVFLLMLAGHETTVNLISSGTLALLQHPEQLALLRRSPELIKSAVEELVRFTAPVETAT HHHHHHHHCCCCHHHHHHCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH ERYAAEDVIIADTKIAKGEMVLVALASANRDERQFTNPDQLDITREKNRHVGFGLGIHYC HHHHHCCEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCCEEEECCCCCCCEECHHHHHH LGAPLARMEAQIGLQLLTDLRPNLRLAVPAEQLRWRSTAVVRGLEALPVEW HCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCHHHCCCCC >Mature Secondary Structure SSVSRETKPTQPVLNLTDRQFKADPFSIYAQLRRDNPVAKAKLGSLPTWIVTRYDDVVE CCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHH ILKNDRVFVKNYKNAQSLEQQRKRPWMPASLRALESNMLDQDNPDHLRLRSLVHKAFTPQ HHHCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH RMEEMRPRIQSIAESLLISSQQRGRGDLIADFALPLPLTVIVELLGIPTEDRQKFHRWAK HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH YVLNSPTMLNMLLAIPAIMAQMKYLKQLFAKRRSNPQDDLLTALVQAEADGDRFSEDELV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHH AMVFLLMLAGHETTVNLISSGTLALLQHPEQLALLRRSPELIKSAVEELVRFTAPVETAT HHHHHHHHCCCCHHHHHHCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH ERYAAEDVIIADTKIAKGEMVLVALASANRDERQFTNPDQLDITREKNRHVGFGLGIHYC HHHHHCCEEEECCCCCCCCEEEEEEECCCCCHHCCCCCCCEEEECCCCCCCEECHHHHHH LGAPLARMEAQIGLQLLTDLRPNLRLAVPAEQLRWRSTAVVRGLEALPVEW HCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]