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The map label for this gene is 159898448

Identifier: 159898448

GI number: 159898448

Start: 2321536

End: 2322180

Strand: Reverse

Name: 159898448

Synonym: Haur_1924

Alternate gene names: NA

Gene position: 2322180-2321536 (Counterclockwise)

Preceding gene: 159898449

Following gene: 159898447

Centisome position: 36.59

GC content: 48.06

Gene sequence:

>645_bases
ATGTTTAATCCACAGGCTGGCTATCCATTTCGCTCAGATAACAAACCCCGCAACGAACTTTTTGAATTTGCCAAGGCTTG
GCTGGGCACAACCCTGGCTTTTGCCTTGGTATATCGAAATATTATGCCATTGCGTGATGCCGTGATTATTATGGGGATTG
CCGCTGGCCTTGGCATCGTCATCCACGAATTGGCCCATCGCGTCGTTGCGCGGCGCTTTGGCAGCGAAGCGCATTTTTTT
GCCAACGATGCCATGTTGGTGATTTCGGTGCTGCTGGCATTAACTGGATTTATCTTTGCCGCACCTGGGGCTGTGCATCA
TCGTGGTTATTTGACCAAAAAACAGCTTGGGTTGGTGGCAGCGGCTGGGCCAGCCAGCAATATGGTCATCGCGCTGCTTT
CGTTGCTGCTCATTCCAATCGCTAATACTCTCAACATCCAATTTCTGTTTAAGATTTCCGTCTACAGCTATGTGGTCAAT
TCACTACTGGGGATTTTTAATATGATCCCTTATGGGCCATTGGATGGCGCTAAAATTATGGACTGGGACATGCGGGCATT
TATTGCCATGGCCTCAGTTGGCGGGCTGTTGTTTGTTGTACAATACCTGCCGATTGCCACAAACTTATTTGTTTTTGGCT
TCTAA

Upstream 100 bases:

>100_bases
GGCAAAAAACCACGATTAGCAATGTTCGCTTTGTGCCGCTGATTGGCGCTGGTGGCTGGGAGCACGCACCAGAAACCACA
GCGGAAGGAGAGTAGGCTCA

Downstream 100 bases:

>100_bases
AGCTTTTTTGGAGGATGTATGCGCCGACCATTGTTGGCTGGTAATTGGAAAATGCACTACGGGGTCAGTGAGGGTGTGGC
CTTAGTCGAAGCACTCAGCG

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MFNPQAGYPFRSDNKPRNELFEFAKAWLGTTLAFALVYRNIMPLRDAVIIMGIAAGLGIVIHELAHRVVARRFGSEAHFF
ANDAMLVISVLLALTGFIFAAPGAVHHRGYLTKKQLGLVAAAGPASNMVIALLSLLLIPIANTLNIQFLFKISVYSYVVN
SLLGIFNMIPYGPLDGAKIMDWDMRAFIAMASVGGLLFVVQYLPIATNLFVFGF

Sequences:

>Translated_214_residues
MFNPQAGYPFRSDNKPRNELFEFAKAWLGTTLAFALVYRNIMPLRDAVIIMGIAAGLGIVIHELAHRVVARRFGSEAHFF
ANDAMLVISVLLALTGFIFAAPGAVHHRGYLTKKQLGLVAAAGPASNMVIALLSLLLIPIANTLNIQFLFKISVYSYVVN
SLLGIFNMIPYGPLDGAKIMDWDMRAFIAMASVGGLLFVVQYLPIATNLFVFGF
>Mature_214_residues
MFNPQAGYPFRSDNKPRNELFEFAKAWLGTTLAFALVYRNIMPLRDAVIIMGIAAGLGIVIHELAHRVVARRFGSEAHFF
ANDAMLVISVLLALTGFIFAAPGAVHHRGYLTKKQLGLVAAAGPASNMVIALLSLLLIPIANTLNIQFLFKISVYSYVVN
SLLGIFNMIPYGPLDGAKIMDWDMRAFIAMASVGGLLFVVQYLPIATNLFVFGF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 23410; Mature: 23410

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPQAGYPFRSDNKPRNELFEFAKAWLGTTLAFALVYRNIMPLRDAVIIMGIAAGLGIV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHELAHRVVARRFGSEAHFFANDAMLVISVLLALTGFIFAAPGAVHHRGYLTKKQLGLVA
HHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCEEE
AAGPASNMVIALLSLLLIPIANTLNIQFLFKISVYSYVVNSLLGIFNMIPYGPLDGAKIM
ECCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC
DWDMRAFIAMASVGGLLFVVQYLPIATNLFVFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MFNPQAGYPFRSDNKPRNELFEFAKAWLGTTLAFALVYRNIMPLRDAVIIMGIAAGLGIV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHELAHRVVARRFGSEAHFFANDAMLVISVLLALTGFIFAAPGAVHHRGYLTKKQLGLVA
HHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCEEE
AAGPASNMVIALLSLLLIPIANTLNIQFLFKISVYSYVVNSLLGIFNMIPYGPLDGAKIM
ECCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC
DWDMRAFIAMASVGGLLFVVQYLPIATNLFVFGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]