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The map label for this gene is yycF [H]

Identifier: 159898433

GI number: 159898433

Start: 2303994

End: 2304353

Strand: Direct

Name: yycF [H]

Synonym: Haur_1909

Alternate gene names: 159898433

Gene position: 2303994-2304353 (Clockwise)

Preceding gene: 159898432

Following gene: 159898435

Centisome position: 36.3

GC content: 46.94

Gene sequence:

>360_bases
GTGGTTGCTGGAAAACATATATTAATCGTTGATGATGAAGATTCAATCGCAGACATGATCGCCGATGCGCTGCGAGATGA
AGGTTATACGGTCGATGTGGCTTATGATGGGCGACGTGGCCTCGAATTGGCCCAGCGCATTAAGCCAGCCTTAGTGTTGA
CCGATGTGATGATGCCGTTTATGGACGGGATCAAAATGGCCGAATTGGTACAGCGCGAATTTGGCGCAACCTCGCCGCCA
TTTGTGTTTATGAGCGCCGTTGATTGCCGTGACCAGACCCAGCTGTATGGGCAATTTTTGTTTAAACCCTTTACTTTGGA
TATTCTGTTTGACACAATTGAAACGATTATGCAGAACTAA

Upstream 100 bases:

>100_bases
TGGTCTGGTTTATGCATTTTAAAGTGTTCCGAGGAGCAAACGCTAATGATCCGCGATCATTGGCGTTGCAATGTCCCACG
GCGATAAAAGGAGTCTTTGT

Downstream 100 bases:

>100_bases
AGGCACACGCCCCACCATTGTTGGTTGCCATCGTGCCAGGCTTTGGCAGTGGCAAAAATCTGGGCGCGGGCATCGGTAAT
TGGTTGATCACGATAGGGGT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MVAGKHILIVDDEDSIADMIADALRDEGYTVDVAYDGRRGLELAQRIKPALVLTDVMMPFMDGIKMAELVQREFGATSPP
FVFMSAVDCRDQTQLYGQFLFKPFTLDILFDTIETIMQN

Sequences:

>Translated_119_residues
MVAGKHILIVDDEDSIADMIADALRDEGYTVDVAYDGRRGLELAQRIKPALVLTDVMMPFMDGIKMAELVQREFGATSPP
FVFMSAVDCRDQTQLYGQFLFKPFTLDILFDTIETIMQN
>Mature_119_residues
MVAGKHILIVDDEDSIADMIADALRDEGYTVDVAYDGRRGLELAQRIKPALVLTDVMMPFMDGIKMAELVQREFGATSPP
FVFMSAVDCRDQTQLYGQFLFKPFTLDILFDTIETIMQN

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=124, Percent_Identity=37.0967741935484, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13414; Mature: 13414

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAGKHILIVDDEDSIADMIADALRDEGYTVDVAYDGRRGLELAQRIKPALVLTDVMMPF
CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHH
MDGIKMAELVQREFGATSPPFVFMSAVDCRDQTQLYGQFLFKPFTLDILFDTIETIMQN
HCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVAGKHILIVDDEDSIADMIADALRDEGYTVDVAYDGRRGLELAQRIKPALVLTDVMMPF
CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHH
MDGIKMAELVQREFGATSPPFVFMSAVDCRDQTQLYGQFLFKPFTLDILFDTIETIMQN
HCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122 [H]