| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fabG [C]
Identifier: 159898375
GI number: 159898375
Start: 2152517
End: 2153257
Strand: Direct
Name: fabG [C]
Synonym: Haur_1851
Alternate gene names: 159898375
Gene position: 2152517-2153257 (Clockwise)
Preceding gene: 159898374
Following gene: 159898378
Centisome position: 33.92
GC content: 51.82
Gene sequence:
>741_bases GTGCCACAGGATTTTAGTGGGCAAGTTGCCTTAGTAACTGGAGCTTCGCGCGGCATTGGAGCCGAAATTAGTCGCCAGCT GGCGCAACGTGGAGCCGATATCGTGATTAATTATCGCAGCAAAGCCTCGCGAGCCGAAGCTGTTGCCAGCGAAATAACTG CGCTTGGCCGGACTGCACTCCTGGCTCAGGCCGATTTAACCCAAATTAATGATTTGATTACCACCCAAACCCAAATTCAA CAAGCCTTTGGCAAACTCGATTTGTTGGTACTCAATGCCAGCGGTGGCCTTGAAAAAGATAAACCCGCTAGCTACGCCAT GGATCTCAATCTCACTGCTCAAGTGCAAACCGTCGAAACCATGTTGCCATTGATGCAAGCTGGCAGTTGCATTGTTTTCG TCACCAGCCACTGGGCGCATTTCTATGGCGAACGACCAATTATCGCTGGCTACGAGCCAGTTGCTAGCAGCAAAAAAGCT GGCGAAATGGCGCTGCGCGAACGGATTGATCAATTTACCCAGCGCGGAATTCATTTTTATGTGGTCAGCGGCGATATGAT CGAAGGCACGATCACGCCCAAATTGCTTGATCGTGCCCAGCCTGGCTTTTTGGCCGCCCGCAAAGAACACAGCCCTGAGC CAATTCCCACGATTGAAGAATTTGCCAGCGCGATTGTAGCAACCGCCGCCGATCGCAGCCAAGCCAATGGCCACACTGTG TTCGTTGGGCCGATTATTTAA
Upstream 100 bases:
>100_bases CCTCTACAATCTGACGACGAACCTCTAGCCCACTATTGTATAATCGTGCTAGCTTTCTCCAGTTTGGGGAAACCAACCGA GCTACGTGAAAGGATCGTGT
Downstream 100 bases:
>100_bases GATAACTTAATAAGGTAAATAAAGAATCCTCATGGCAGATATAATTGACTTCCATGAGGATTCTGTTTAGTAGTCTAGGG CATCGATTTGAAAACTGAGT
Product: short-chain dehydrogenase/reductase SDR
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPQDFSGQVALVTGASRGIGAEISRQLAQRGADIVINYRSKASRAEAVASEITALGRTALLAQADLTQINDLITTQTQIQ QAFGKLDLLVLNASGGLEKDKPASYAMDLNLTAQVQTVETMLPLMQAGSCIVFVTSHWAHFYGERPIIAGYEPVASSKKA GEMALRERIDQFTQRGIHFYVVSGDMIEGTITPKLLDRAQPGFLAARKEHSPEPIPTIEEFASAIVATAADRSQANGHTV FVGPII
Sequences:
>Translated_246_residues MPQDFSGQVALVTGASRGIGAEISRQLAQRGADIVINYRSKASRAEAVASEITALGRTALLAQADLTQINDLITTQTQIQ QAFGKLDLLVLNASGGLEKDKPASYAMDLNLTAQVQTVETMLPLMQAGSCIVFVTSHWAHFYGERPIIAGYEPVASSKKA GEMALRERIDQFTQRGIHFYVVSGDMIEGTITPKLLDRAQPGFLAARKEHSPEPIPTIEEFASAIVATAADRSQANGHTV FVGPII >Mature_245_residues PQDFSGQVALVTGASRGIGAEISRQLAQRGADIVINYRSKASRAEAVASEITALGRTALLAQADLTQINDLITTQTQIQQ AFGKLDLLVLNASGGLEKDKPASYAMDLNLTAQVQTVETMLPLMQAGSCIVFVTSHWAHFYGERPIIAGYEPVASSKKAG EMALRERIDQFTQRGIHFYVVSGDMIEGTITPKLLDRAQPGFLAARKEHSPEPIPTIEEFASAIVATAADRSQANGHTVF VGPII
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 26422; Mature: 26291
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQDFSGQVALVTGASRGIGAEISRQLAQRGADIVINYRSKASRAEAVASEITALGRTAL CCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH LAQADLTQINDLITTQTQIQQAFGKLDLLVLNASGGLEKDKPASYAMDLNLTAQVQTVET HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEECCEEEHHHHHHH MLPLMQAGSCIVFVTSHWAHFYGERPIIAGYEPVASSKKAGEMALRERIDQFTQRGIHFY HHHHHHCCCEEEEEEHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEE VVSGDMIEGTITPKLLDRAQPGFLAARKEHSPEPIPTIEEFASAIVATAADRSQANGHTV EEECCEEECCCCHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE FVGPII EEECCC >Mature Secondary Structure PQDFSGQVALVTGASRGIGAEISRQLAQRGADIVINYRSKASRAEAVASEITALGRTAL CCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH LAQADLTQINDLITTQTQIQQAFGKLDLLVLNASGGLEKDKPASYAMDLNLTAQVQTVET HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEECCEEEHHHHHHH MLPLMQAGSCIVFVTSHWAHFYGERPIIAGYEPVASSKKAGEMALRERIDQFTQRGIHFY HHHHHHCCCEEEEEEHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEE VVSGDMIEGTITPKLLDRAQPGFLAARKEHSPEPIPTIEEFASAIVATAADRSQANGHTV EEECCEEECCCCHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE FVGPII EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8868443 [H]