| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898378
Identifier: 159898378
GI number: 159898378
Start: 2155300
End: 2156328
Strand: Direct
Name: 159898378
Synonym: Haur_1854
Alternate gene names: NA
Gene position: 2155300-2156328 (Clockwise)
Preceding gene: 159898375
Following gene: 159898380
Centisome position: 33.96
GC content: 49.76
Gene sequence:
>1029_bases ATGCATAGCCCAAACTATACCTTTGCCGACTTGTTACACATCTTTTTTGCCTTACGCCCCAACCCTGATCGGATTCGCAC CTACGATGATTTGGCTCAAGCAACTGGAATTTCGCGCCGTTCATTAGCTCATTGGTTTGCTGGCGATTACGCTCCCCGTA CTCCAGAGCCTGTTGAACGGCTCGGCGATATGTTGGGGCTAACTGGCTTTCAAATCGATCTGATGTTGTATGCGATCAAC CCACGTTGGTCACGCTATAACACCCCAGCCGATCAACTGCAAACGGCTGAGGTCATTCGGCGGGTTGAACAACGCTTGCC TGATCCAAGCATCAGCACCAACGATCTGCCAAGCCCAAGCCAAATCGAAAGCACTTGGCCGATCTTGTTTCGCGATAGCT TTGAATCGAATGCGCATCACTGGGGGCTTGGCAGTAAAGATGATGATTCAGGCCGCGTCGAACGTTCGATCAGCAATCAA TGCCTTGAACTGCGGCTAAGCAATCGCTTTGTTAGCGAAATGTTTATCGGAGCCGATTCGCAATGCTTCACGCCCGATCG CTATTATTGCTCGGTTTATGGGCGCTTTGTTAGCGAGGCTGGACCTGATGATGGCTTGGCTCTTATATTTGAGGAGATCA GTGATGCCTGTCATGGATTAATTCGCATTCGCGATCGAAGTGGCGAGTTTTCAGTGATTCAAGGGTTTCATGGCGGCGAT TTTTGGAAAATTTACTTGCAGCGCCGCCCGATGCATGGCTATCGTATTGGTCAATTTAATAAAATCGCTCTATTGGTGGA GCATCAACAGCATTCAATATTTATTAACGACTACCATCAAGCAAGCTGGGAGATGCCACGCCTGCCTGCCAGCCGGATCG ATCTTGGGATTATCGCAGGTGGTCAGCAACAAGCCGAGGTTCATTTTAAAGATTTCAGTGTGCGTGTGCCCGCCGATCAA CGCCCCTTTGCAACCCTGGAAACGCTGATCGGCGGAACTTTAGCAAATTCGACGTGGCGGAATCAATAG
Upstream 100 bases:
>100_bases TCCTTGCCGTTGCTATTCCATACCAAGCAGACTAGCAAAGCTGATCGGGCCGAGTTGCATGTTTGTGCAACTCAGCCTAA CGTTTGAGGAAATTCGACCA
Downstream 100 bases:
>100_bases AACGAAACCAATAAATGTGGGCTGGGTTCGTTTCTACCCCGCGAGCACAAAGCCAATCACTTGATCAAGTTTGAGTGTTT GGCCGTAACTCCAAGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MHSPNYTFADLLHIFFALRPNPDRIRTYDDLAQATGISRRSLAHWFAGDYAPRTPEPVERLGDMLGLTGFQIDLMLYAIN PRWSRYNTPADQLQTAEVIRRVEQRLPDPSISTNDLPSPSQIESTWPILFRDSFESNAHHWGLGSKDDDSGRVERSISNQ CLELRLSNRFVSEMFIGADSQCFTPDRYYCSVYGRFVSEAGPDDGLALIFEEISDACHGLIRIRDRSGEFSVIQGFHGGD FWKIYLQRRPMHGYRIGQFNKIALLVEHQQHSIFINDYHQASWEMPRLPASRIDLGIIAGGQQQAEVHFKDFSVRVPADQ RPFATLETLIGGTLANSTWRNQ
Sequences:
>Translated_342_residues MHSPNYTFADLLHIFFALRPNPDRIRTYDDLAQATGISRRSLAHWFAGDYAPRTPEPVERLGDMLGLTGFQIDLMLYAIN PRWSRYNTPADQLQTAEVIRRVEQRLPDPSISTNDLPSPSQIESTWPILFRDSFESNAHHWGLGSKDDDSGRVERSISNQ CLELRLSNRFVSEMFIGADSQCFTPDRYYCSVYGRFVSEAGPDDGLALIFEEISDACHGLIRIRDRSGEFSVIQGFHGGD FWKIYLQRRPMHGYRIGQFNKIALLVEHQQHSIFINDYHQASWEMPRLPASRIDLGIIAGGQQQAEVHFKDFSVRVPADQ RPFATLETLIGGTLANSTWRNQ >Mature_342_residues MHSPNYTFADLLHIFFALRPNPDRIRTYDDLAQATGISRRSLAHWFAGDYAPRTPEPVERLGDMLGLTGFQIDLMLYAIN PRWSRYNTPADQLQTAEVIRRVEQRLPDPSISTNDLPSPSQIESTWPILFRDSFESNAHHWGLGSKDDDSGRVERSISNQ CLELRLSNRFVSEMFIGADSQCFTPDRYYCSVYGRFVSEAGPDDGLALIFEEISDACHGLIRIRDRSGEFSVIQGFHGGD FWKIYLQRRPMHGYRIGQFNKIALLVEHQQHSIFINDYHQASWEMPRLPASRIDLGIIAGGQQQAEVHFKDFSVRVPADQ RPFATLETLIGGTLANSTWRNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39080; Mature: 39080
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSPNYTFADLLHIFFALRPNPDRIRTYDDLAQATGISRRSLAHWFAGDYAPRTPEPVER CCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH LGDMLGLTGFQIDLMLYAINPRWSRYNTPADQLQTAEVIRRVEQRLPDPSISTNDLPSPS HHHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH QIESTWPILFRDSFESNAHHWGLGSKDDDSGRVERSISNQCLELRLSNRFVSEMFIGADS HCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QCFTPDRYYCSVYGRFVSEAGPDDGLALIFEEISDACHGLIRIRDRSGEFSVIQGFHGGD CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCC FWKIYLQRRPMHGYRIGQFNKIALLVEHQQHSIFINDYHQASWEMPRLPASRIDLGIIAG EEEEEEEECCCCCEECCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHCCEEEEEC GQQQAEVHFKDFSVRVPADQRPFATLETLIGGTLANSTWRNQ CCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCCCC >Mature Secondary Structure MHSPNYTFADLLHIFFALRPNPDRIRTYDDLAQATGISRRSLAHWFAGDYAPRTPEPVER CCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHH LGDMLGLTGFQIDLMLYAINPRWSRYNTPADQLQTAEVIRRVEQRLPDPSISTNDLPSPS HHHHHCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH QIESTWPILFRDSFESNAHHWGLGSKDDDSGRVERSISNQCLELRLSNRFVSEMFIGADS HCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QCFTPDRYYCSVYGRFVSEAGPDDGLALIFEEISDACHGLIRIRDRSGEFSVIQGFHGGD CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCC FWKIYLQRRPMHGYRIGQFNKIALLVEHQQHSIFINDYHQASWEMPRLPASRIDLGIIAG EEEEEEEECCCCCEECCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHCCEEEEEC GQQQAEVHFKDFSVRVPADQRPFATLETLIGGTLANSTWRNQ CCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA