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The map label for this gene is yoaJ [H]

Identifier: 159898342

GI number: 159898342

Start: 2115342

End: 2116775

Strand: Direct

Name: yoaJ [H]

Synonym: Haur_1818

Alternate gene names: 159898342

Gene position: 2115342-2116775 (Clockwise)

Preceding gene: 159898338

Following gene: 159898343

Centisome position: 33.33

GC content: 50.77

Gene sequence:

>1434_bases
ATGGCTTGGCGTAAAGGCACTTTTTTCAGCTTTGGTTTAATCTTGAGTTTATTGTTAACCTCAGCGCTATTTGTTGCCCA
AGGCAGCGCCCAACGTATGCAAACGATTGCTGATCCATGGGCGTTGCGTAGCGGGCGGGCAACGTTTTATGATCCAACGG
TAGGTATGGGTAATTGTAGTTTGCCAGTGCCCAGCGATATGCTTTTGGCAGCCATGAATACGACCGATTATGGCTTGGCC
GATTATTGCGGAGCCTATGTGACGGTCAATGGGCCACGGGGCAGCGTTACGGTAAAAATTATTGATCGTTGCCCTGGCTG
TGTGGTGGGCGGGATCGATCTTAGCCCGCAGGCTTTTGAGCGAATTGCAGCGCTTGAGGCGGGGAATGTACCAATTACTT
GGCAATTGATCAGCGCACCAAATGTCAGTGGCAACGTTATCTACAACTATAAAGAAGGCAGTAGCCAATGGTGGGCTGGC
GTACAAGTCCGCAATCATCGTAATGCAATTGCCAAGTTTGAATATCGCAATCCTCAGGGTATTTTCCAGAATGTTGATCG
CGTCCAGTATAATTATTTTCTGGTGCCAGGTGGAATGGGCACTGGCCCCTTTACCTTTCGCCTGACTGATGTTTATGGCA
ATGTCTTTACCGATAATACTATTCCATTGCGCTCAGAGGGTGATGTCGCCGGAAATCAACAGTTTCCTTTTGTGCCAACG
CCTGGCAGTACGCCGACCGCCAGCCCAACCCGCACCGCCAGCCCAACCGTGGTTAGCCCAACTACTCGGCCTGACCAAAC
CATTATGAATGCTTCATCGACTGAAGCTGGCGGTAGCACGCACTATGCGCTTGATGGCAACCTCAACACCCGATGGAGTA
GTGGCTTACCACAGGCAGCTGGTCAATGGATTTATATCGGTTTGCCGCGGGTTACGCCTATCTCAGGCATTAAACTTGAT
GCAGGCAGTTCAGGTGGCGATTATCCAGCAGGGTTTATTGTTCAAACTCGCGACGACACCAGCGATTGGGCAACTGTGGC
GACAGGAAGCGGCTCAAGCCAAATCACAACCATCAACTTTGCTGCTCGGAATGCTCGCTATGTTCGCATTGAGCTAACTG
CTCGTTCGGCTAATTGGTGGTCGATTCATGAATTGACGGTGATATTCGCTGCTCAACCTGCGACGCTTACCCCAACGATT
TTGCCGCCGACAAACACAATTGTGCCTGCCACCGTCACCCCAACCCTTGTGCCAACCATGGCTCCACCGCCATTGACTGC
CACCCCAACCCTGAGTGCTTGGCAAGCCTATACTAATTATAGCGTTGGCAGCCTTGTACAGCACAATGGTATTAACTATC
GTTGTATTCAAGCCCATACTTCGTTACCAGGTTGGGAGCCACAGATCGTTCCAGCACTTTGGCAACCACTTTAA

Upstream 100 bases:

>100_bases
AATTGCTTAAAGTGTGTTTGTAATTTCATTGAACTTATTAATGCGAACTAGCTTGAAATGAAATCACAGCAATGTTTTAC
CCGAGTTTTGGAGGATTTTT

Downstream 100 bases:

>100_bases
GCTGAATCGAGCCGTGATCATGATCGCGGCTCGACGCATTCTATGCTGCCATGCTGGTTGCTATCCCAAATTTGCACTTT
TAACGTATACTGGTGCGCGT

Product: coagulation factor 5/8 type domain-containing protein

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MAWRKGTFFSFGLILSLLLTSALFVAQGSAQRMQTIADPWALRSGRATFYDPTVGMGNCSLPVPSDMLLAAMNTTDYGLA
DYCGAYVTVNGPRGSVTVKIIDRCPGCVVGGIDLSPQAFERIAALEAGNVPITWQLISAPNVSGNVIYNYKEGSSQWWAG
VQVRNHRNAIAKFEYRNPQGIFQNVDRVQYNYFLVPGGMGTGPFTFRLTDVYGNVFTDNTIPLRSEGDVAGNQQFPFVPT
PGSTPTASPTRTASPTVVSPTTRPDQTIMNASSTEAGGSTHYALDGNLNTRWSSGLPQAAGQWIYIGLPRVTPISGIKLD
AGSSGGDYPAGFIVQTRDDTSDWATVATGSGSSQITTINFAARNARYVRIELTARSANWWSIHELTVIFAAQPATLTPTI
LPPTNTIVPATVTPTLVPTMAPPPLTATPTLSAWQAYTNYSVGSLVQHNGINYRCIQAHTSLPGWEPQIVPALWQPL

Sequences:

>Translated_477_residues
MAWRKGTFFSFGLILSLLLTSALFVAQGSAQRMQTIADPWALRSGRATFYDPTVGMGNCSLPVPSDMLLAAMNTTDYGLA
DYCGAYVTVNGPRGSVTVKIIDRCPGCVVGGIDLSPQAFERIAALEAGNVPITWQLISAPNVSGNVIYNYKEGSSQWWAG
VQVRNHRNAIAKFEYRNPQGIFQNVDRVQYNYFLVPGGMGTGPFTFRLTDVYGNVFTDNTIPLRSEGDVAGNQQFPFVPT
PGSTPTASPTRTASPTVVSPTTRPDQTIMNASSTEAGGSTHYALDGNLNTRWSSGLPQAAGQWIYIGLPRVTPISGIKLD
AGSSGGDYPAGFIVQTRDDTSDWATVATGSGSSQITTINFAARNARYVRIELTARSANWWSIHELTVIFAAQPATLTPTI
LPPTNTIVPATVTPTLVPTMAPPPLTATPTLSAWQAYTNYSVGSLVQHNGINYRCIQAHTSLPGWEPQIVPALWQPL
>Mature_476_residues
AWRKGTFFSFGLILSLLLTSALFVAQGSAQRMQTIADPWALRSGRATFYDPTVGMGNCSLPVPSDMLLAAMNTTDYGLAD
YCGAYVTVNGPRGSVTVKIIDRCPGCVVGGIDLSPQAFERIAALEAGNVPITWQLISAPNVSGNVIYNYKEGSSQWWAGV
QVRNHRNAIAKFEYRNPQGIFQNVDRVQYNYFLVPGGMGTGPFTFRLTDVYGNVFTDNTIPLRSEGDVAGNQQFPFVPTP
GSTPTASPTRTASPTVVSPTTRPDQTIMNASSTEAGGSTHYALDGNLNTRWSSGLPQAAGQWIYIGLPRVTPISGIKLDA
GSSGGDYPAGFIVQTRDDTSDWATVATGSGSSQITTINFAARNARYVRIELTARSANWWSIHELTVIFAAQPATLTPTIL
PPTNTIVPATVTPTLVPTMAPPPLTATPTLSAWQAYTNYSVGSLVQHNGINYRCIQAHTSLPGWEPQIVPALWQPL

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG4305

COG function: function code G; Endoglucanase C-terminal domain/subunit and related proteins

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 51246; Mature: 51115

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWRKGTFFSFGLILSLLLTSALFVAQGSAQRMQTIADPWALRSGRATFYDPTVGMGNCS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCEEEECCCCCCCCCC
LPVPSDMLLAAMNTTDYGLADYCGAYVTVNGPRGSVTVKIIDRCPGCVVGGIDLSPQAFE
CCCCCCCEEEEECCCCCCCHHHCCEEEEEECCCCEEEEEEHHCCCCEEEECCCCCHHHHH
RIAALEAGNVPITWQLISAPNVSGNVIYNYKEGSSQWWAGVQVRNHRNAIAKFEYRNPQG
HHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCHH
IFQNVDRVQYNYFLVPGGMGTGPFTFRLTDVYGNVFTDNTIPLRSEGDVAGNQQFPFVPT
HHHCCCEEEEEEEEEECCCCCCCEEEEEEEECCCEEECCEEEECCCCCCCCCCCCCEEEC
PGSTPTASPTRTASPTVVSPTTRPDQTIMNASSTEAGGSTHYALDGNLNTRWSSGLPQAA
CCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
GQWIYIGLPRVTPISGIKLDAGSSGGDYPAGFIVQTRDDTSDWATVATGSGSSQITTINF
CCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEE
AARNARYVRIELTARSANWWSIHELTVIFAAQPATLTPTILPPTNTIVPATVTPTLVPTM
EECCEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCEEECCCCCEEECEECCEECCCC
APPPLTATPTLSAWQAYTNYSVGSLVQHNGINYRCIQAHTSLPGWEPQIVPALWQPL
CCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
AWRKGTFFSFGLILSLLLTSALFVAQGSAQRMQTIADPWALRSGRATFYDPTVGMGNCS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCEEEECCCCCCCCCC
LPVPSDMLLAAMNTTDYGLADYCGAYVTVNGPRGSVTVKIIDRCPGCVVGGIDLSPQAFE
CCCCCCCEEEEECCCCCCCHHHCCEEEEEECCCCEEEEEEHHCCCCEEEECCCCCHHHHH
RIAALEAGNVPITWQLISAPNVSGNVIYNYKEGSSQWWAGVQVRNHRNAIAKFEYRNPQG
HHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEEECCCHH
IFQNVDRVQYNYFLVPGGMGTGPFTFRLTDVYGNVFTDNTIPLRSEGDVAGNQQFPFVPT
HHHCCCEEEEEEEEEECCCCCCCEEEEEEEECCCEEECCEEEECCCCCCCCCCCCCEEEC
PGSTPTASPTRTASPTVVSPTTRPDQTIMNASSTEAGGSTHYALDGNLNTRWSSGLPQAA
CCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
GQWIYIGLPRVTPISGIKLDAGSSGGDYPAGFIVQTRDDTSDWATVATGSGSSQITTINF
CCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEE
AARNARYVRIELTARSANWWSIHELTVIFAAQPATLTPTILPPTNTIVPATVTPTLVPTM
EECCEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCEEECCCCCEEECEECCEECCCC
APPPLTATPTLSAWQAYTNYSVGSLVQHNGINYRCIQAHTSLPGWEPQIVPALWQPL
CCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]