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The map label for this gene is yfiY [H]

Identifier: 159898330

GI number: 159898330

Start: 2099017

End: 2100093

Strand: Direct

Name: yfiY [H]

Synonym: Haur_1806

Alternate gene names: 159898330

Gene position: 2099017-2100093 (Clockwise)

Preceding gene: 159898329

Following gene: 159898331

Centisome position: 33.07

GC content: 54.04

Gene sequence:

>1077_bases
ATGACATCCCTTTCAGTTCGTTTTCGTTCGTTATTGGCCTTACTCGCGCTTGTGACCTTGGCTGCTTGTGGCTCGACTAC
GGCTCCAACTGCCACCACCGCCCCAGCGGCCACCGAAGCTTCTGCGGCAACCATTCCTCCAGCAGGAAGCGAAGTGCCAG
CGGAAACCGAAGTACCAGCCGCGACCGAAGCGCCAACCGCCGAAGCAACTACAGAAACCAGTGCTAGCGGCACACGCAGC
ATTGAAACCCGCTATGGCACGGTCGAAGTGCCAGCAACTCCTGCTCGGTTGGTAACGCTTGATGAAGGCGCATTGGATAC
CGCCGTGGCCTTGGGCATTATCCCAGTTGGTGGCATTAGCTCACGTTTGAGCGAAGGCGTTGCTCCCTATATCGCCGATA
AAGTGCCTGGGATTGCGATTGTTGGTAACCCTGGCGAAATCAATTTCGAAGCAGTGATTGCTGCTACCCCCGACTTGATT
TTGACCCACAACCGCATCGACGAAGAAACCTACAAAAAATTGAGCGCAATTGCTCCAACCATTGTGCCAACCAACGGCAT
TGGCGCTTGGAAGGATGCCGCTGGCGAATATGCCGCAGCCTTGGGCAAAACCAGCGAACTCGAAGCTTGGTTGAAAGAAT
TCGATGCGAAAGTTGCTGATGCCAAAACCAAATTGGCAATCAAAGAAGGCACGACTGGCGCAGTTATCCGCTGGATGCCC
CAAGGCCCATTGGTGATGGGTCGCTTGTTGCCAGCAGTTGTCTTGATCGAAGAATTGGGCTTGAGCTTGCCCCAAGTGGC
GATCGATTTGGGCACTGATGCACCACACACTGATGTTTTGAGCTTGGAACAATTGGCAACCGTTGATACCGACTGGTTGT
TTGTGGCCACGTTCAATGCTGAAGGTGATGGCGCTTTGGCAACCGCCCGCGAACAAGCAGCGTTTGGCCAATTGAAGGCT
GAAAAATCCAAGCAAGTTGTGGCGGTTAGCGCTCAACTCTGGAGCAGCGCGTTTGGTCCATTGGCTGCCGATGCAATTTT
GAGCGATATTGTCGCTGGCGTTCCTGCGGCACAATAG

Upstream 100 bases:

>100_bases
TTGAGCGGTGTATTCGAACGGGTTTATTGCCCGCACCCGATTTACGCCAGACTAGTATTGGTATTCGCTAAAATTTTTAG
CATACAAAGGAATTACACCA

Downstream 100 bases:

>100_bases
GTTATTGTGGGGTTGTTGTTGGGGATCGGGGATCGGTTCGTTTGCATGCCCTCACCCCCTAGCCCCCTCTCCCGCCCAGC
AGGCGAGGGGAACCATTAAA

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTSLSVRFRSLLALLALVTLAACGSTTAPTATTAPAATEASAATIPPAGSEVPAETEVPAATEAPTAEATTETSASGTRS
IETRYGTVEVPATPARLVTLDEGALDTAVALGIIPVGGISSRLSEGVAPYIADKVPGIAIVGNPGEINFEAVIAATPDLI
LTHNRIDEETYKKLSAIAPTIVPTNGIGAWKDAAGEYAAALGKTSELEAWLKEFDAKVADAKTKLAIKEGTTGAVIRWMP
QGPLVMGRLLPAVVLIEELGLSLPQVAIDLGTDAPHTDVLSLEQLATVDTDWLFVATFNAEGDGALATAREQAAFGQLKA
EKSKQVVAVSAQLWSSAFGPLAADAILSDIVAGVPAAQ

Sequences:

>Translated_358_residues
MTSLSVRFRSLLALLALVTLAACGSTTAPTATTAPAATEASAATIPPAGSEVPAETEVPAATEAPTAEATTETSASGTRS
IETRYGTVEVPATPARLVTLDEGALDTAVALGIIPVGGISSRLSEGVAPYIADKVPGIAIVGNPGEINFEAVIAATPDLI
LTHNRIDEETYKKLSAIAPTIVPTNGIGAWKDAAGEYAAALGKTSELEAWLKEFDAKVADAKTKLAIKEGTTGAVIRWMP
QGPLVMGRLLPAVVLIEELGLSLPQVAIDLGTDAPHTDVLSLEQLATVDTDWLFVATFNAEGDGALATAREQAAFGQLKA
EKSKQVVAVSAQLWSSAFGPLAADAILSDIVAGVPAAQ
>Mature_357_residues
TSLSVRFRSLLALLALVTLAACGSTTAPTATTAPAATEASAATIPPAGSEVPAETEVPAATEAPTAEATTETSASGTRSI
ETRYGTVEVPATPARLVTLDEGALDTAVALGIIPVGGISSRLSEGVAPYIADKVPGIAIVGNPGEINFEAVIAATPDLIL
THNRIDEETYKKLSAIAPTIVPTNGIGAWKDAAGEYAAALGKTSELEAWLKEFDAKVADAKTKLAIKEGTTGAVIRWMPQ
GPLVMGRLLPAVVLIEELGLSLPQVAIDLGTDAPHTDVLSLEQLATVDTDWLFVATFNAEGDGALATAREQAAFGQLKAE
KSKQVVAVSAQLWSSAFGPLAADAILSDIVAGVPAAQ

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=275, Percent_Identity=24.7272727272727, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36585; Mature: 36454

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSVRFRSLLALLALVTLAACGSTTAPTATTAPAATEASAATIPPAGSEVPAETEVPA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATEAPTAEATTETSASGTRSIETRYGTVEVPATPARLVTLDEGALDTAVALGIIPVGGIS
CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCHH
SRLSEGVAPYIADKVPGIAIVGNPGEINFEAVIAATPDLILTHNRIDEETYKKLSAIAPT
HHHHCCCCHHHHHCCCCEEEECCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHCCC
IVPTNGIGAWKDAAGEYAAALGKTSELEAWLKEFDAKVADAKTKLAIKEGTTGAVIRWMP
EECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCHHEEEEECCCCCEEEEECC
QGPLVMGRLLPAVVLIEELGLSLPQVAIDLGTDAPHTDVLSLEQLATVDTDWLFVATFNA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECC
EGDGALATAREQAAFGQLKAEKSKQVVAVSAQLWSSAFGPLAADAILSDIVAGVPAAQ
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TSLSVRFRSLLALLALVTLAACGSTTAPTATTAPAATEASAATIPPAGSEVPAETEVPA
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATEAPTAEATTETSASGTRSIETRYGTVEVPATPARLVTLDEGALDTAVALGIIPVGGIS
CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCHH
SRLSEGVAPYIADKVPGIAIVGNPGEINFEAVIAATPDLILTHNRIDEETYKKLSAIAPT
HHHHCCCCHHHHHCCCCEEEECCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHCCC
IVPTNGIGAWKDAAGEYAAALGKTSELEAWLKEFDAKVADAKTKLAIKEGTTGAVIRWMP
EECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCHHEEEEECCCCCEEEEECC
QGPLVMGRLLPAVVLIEELGLSLPQVAIDLGTDAPHTDVLSLEQLATVDTDWLFVATFNA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECC
EGDGALATAREQAAFGQLKAEKSKQVVAVSAQLWSSAFGPLAADAILSDIVAGVPAAQ
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]