| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is dhbB [H]
Identifier: 159898328
GI number: 159898328
Start: 2093896
End: 2094753
Strand: Direct
Name: dhbB [H]
Synonym: Haur_1804
Alternate gene names: 159898328
Gene position: 2093896-2094753 (Clockwise)
Preceding gene: 159898327
Following gene: 159898329
Centisome position: 32.99
GC content: 53.61
Gene sequence:
>858_bases ATGGCGTTACCATCAATTGCGGCCTATGCAATTCCAACCGAATTACCAACCAACCGCGCTAATTGGGCGGCTGAGCCACA GCGCGTAGCCTTGTTAATTCACGATTTGCAAAATTATTTTATTGATGCTTTTCCTGCTGGCGAGGAGCCAATTAGCAGCG TGTTGCGTTCGATTGCCAGCTTGCGCGATCACGCGCATGCGCTGGGCATTCCGGTGTTTTATTCAGCCCAACCAGGCGAC CAAGCGCCCGAAGATCGCGGCTTGTTGAGCACATTTTGGGGCAAAGGTTTGAGCACTGGCACGCCACCAGAGATTGTCGC GCCGCTTGCGCCGCAGGCTGGCGATCAGGTAATTACCAAATGGCGTTACAGCGCGTTTCAACGCACGCCGTTGCGTGAAT TGTTGCGTGAAGCAGGCCGCGATCAACTAATTGTGTGTGGGGTTTATGCCCATCTCGGCTGCTTGTTGACCGCCTGCGAT GCCTTTATGCAAGATATTCAGCCATTTTTCGTGGCCGATGCTGTCGCCGATTTTACGCTTGACGAGCATCGCATGGCTTT GCAATACGCCGCTGGCCGTTGTGCTGTGGTCACCACGACCGAACAATTGGTACGCGAATTGGGCTACAACCAATTACGCA GCGAATTGCACGATTTGCTTGATGATGTTGAAAGCATCGGCGCTGATGATAATTTGCTTGATTGGGGCTTGGATTCAGTG CGCTTGATGACCTTGGCCGAGCGCTGGCGGGCAGCAGGCTGTGAAGTTGGTTTTGCTGAATTGGCCGAAACCCCAACTTT AGCCGAATGGTGGCAACGCCGTTTTGCCGCACCACTCCTGGAGCAAGCTCATGGCTAA
Upstream 100 bases:
>100_bases TCGTGGAGAGTTTGCCCAAAACTGGGGTTGGCAAGATCAACAAACGGCTGTTACGTGAGCAATTAAGTGCTGGTCGTGTG CCAGCCTAGAAGGATAGATT
Downstream 100 bases:
>100_bases GCTGGCGCTATCGGCGGCACAACATGGCATTTGGCTGGGTCAACAGCTCGATCCGAGTAGTCCGCTGTATAACACAGCCG AATATGTGGCTCTGCGCGGT
Product: isochorismatase
Products: NA
Alternate protein names: 2,3 dihydro-2,3 dihydroxybenzoate synthase; Superoxide-inducible protein 1; SOI1 [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MALPSIAAYAIPTELPTNRANWAAEPQRVALLIHDLQNYFIDAFPAGEEPISSVLRSIASLRDHAHALGIPVFYSAQPGD QAPEDRGLLSTFWGKGLSTGTPPEIVAPLAPQAGDQVITKWRYSAFQRTPLRELLREAGRDQLIVCGVYAHLGCLLTACD AFMQDIQPFFVADAVADFTLDEHRMALQYAAGRCAVVTTTEQLVRELGYNQLRSELHDLLDDVESIGADDNLLDWGLDSV RLMTLAERWRAAGCEVGFAELAETPTLAEWWQRRFAAPLLEQAHG
Sequences:
>Translated_285_residues MALPSIAAYAIPTELPTNRANWAAEPQRVALLIHDLQNYFIDAFPAGEEPISSVLRSIASLRDHAHALGIPVFYSAQPGD QAPEDRGLLSTFWGKGLSTGTPPEIVAPLAPQAGDQVITKWRYSAFQRTPLRELLREAGRDQLIVCGVYAHLGCLLTACD AFMQDIQPFFVADAVADFTLDEHRMALQYAAGRCAVVTTTEQLVRELGYNQLRSELHDLLDDVESIGADDNLLDWGLDSV RLMTLAERWRAAGCEVGFAELAETPTLAEWWQRRFAAPLLEQAHG >Mature_284_residues ALPSIAAYAIPTELPTNRANWAAEPQRVALLIHDLQNYFIDAFPAGEEPISSVLRSIASLRDHAHALGIPVFYSAQPGDQ APEDRGLLSTFWGKGLSTGTPPEIVAPLAPQAGDQVITKWRYSAFQRTPLRELLREAGRDQLIVCGVYAHLGCLLTACDA FMQDIQPFFVADAVADFTLDEHRMALQYAAGRCAVVTTTEQLVRELGYNQLRSELHDLLDDVESIGADDNLLDWGLDSVR LMTLAERWRAAGCEVGFAELAETPTLAEWWQRRFAAPLLEQAHG
Specific function: Required For Production Of 2,3-Dhb. Also Serves As An Aryl Carrier Protein And Plays A Role In Enterobactin Assembly. [C]
COG id: COG1535
COG function: function code Q; Isochorismate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Escherichia coli, GI1786811, Length=279, Percent_Identity=49.4623655913978, Blast_Score=280, Evalue=7e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009081 - InterPro: IPR016291 - InterPro: IPR000868 - InterPro: IPR006163 [H]
Pfam domain/function: PF00857 Isochorismatase; PF00550 PP-binding [H]
EC number: =3.3.2.1 [H]
Molecular weight: Translated: 31441; Mature: 31310
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPSIAAYAIPTELPTNRANWAAEPQRVALLIHDLQNYFIDAFPAGEEPISSVLRSIAS CCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRDHAHALGIPVFYSAQPGDQAPEDRGLLSTFWGKGLSTGTPPEIVAPLAPQAGDQVITK HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHH WRYSAFQRTPLRELLREAGRDQLIVCGVYAHLGCLLTACDAFMQDIQPFFVADAVADFTL HHHHHHHCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEHRMALQYAAGRCAVVTTTEQLVRELGYNQLRSELHDLLDDVESIGADDNLLDWGLDSV HHHHHHHHHHCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHH RLMTLAERWRAAGCEVGFAELAETPTLAEWWQRRFAAPLLEQAHG HHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALPSIAAYAIPTELPTNRANWAAEPQRVALLIHDLQNYFIDAFPAGEEPISSVLRSIAS CCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRDHAHALGIPVFYSAQPGDQAPEDRGLLSTFWGKGLSTGTPPEIVAPLAPQAGDQVITK HHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHH WRYSAFQRTPLRELLREAGRDQLIVCGVYAHLGCLLTACDAFMQDIQPFFVADAVADFTL HHHHHHHCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEHRMALQYAAGRCAVVTTTEQLVRELGYNQLRSELHDLLDDVESIGADDNLLDWGLDSV HHHHHHHHHHCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHH RLMTLAERWRAAGCEVGFAELAETPTLAEWWQRRFAAPLLEQAHG HHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550523; 9384377; 9298659 [H]