| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898315
Identifier: 159898315
GI number: 159898315
Start: 2080017
End: 2080943
Strand: Direct
Name: 159898315
Synonym: Haur_1791
Alternate gene names: NA
Gene position: 2080017-2080943 (Clockwise)
Preceding gene: 159898314
Following gene: 159898316
Centisome position: 32.77
GC content: 43.58
Gene sequence:
>927_bases ATGTTGAAGAAATCTGAAATCCACGAAATGATTGACCAAGCAATCGAAGCCAATAGCGAAGCTGAAAAAGCCCTTGAGCC AGACCCAAATGTTGATCCTGTGACTTACCTTGACCAACAATGGCGACAAGAGCGTGCAAAATATGTTGGGGTCTATTATC TTGATCATTCTCGTTCTATGGGGAATCCACTTGCCCTAGTAATATTTTTCTTCATGTGTTTTGGCGCAGGCATTATGTTA TGGATTGAAGCGAGTAGGCTTCCAATCAGCATGTTCTATTGTGTATCAATCTTTTTTATCTTGACGAGCTTGTTAATCCT TTGGGCTCTGCGTAATGCAATCATGCTGATGCTCGCTGAACGACGTTACTTAAAAAAACGAGCTATCTTGATCAAACAGT ATGGTGATCCTACTTTAATTGTTGAGTTGCCAGTTGCAACGCGACGTTTAGGCTATTCATGGCCGAAAAATAGCCGATCA GAAGCTGAAACGCGATTTCATGAGCTGCAAGCTGAGTATTATGATGTTTCAACGCGTGATCAAGCCTATAATGAGCAAAT TCAGCGACTGATTGCCCATACACCTGCACCCGATCAGCGGTATCTCACTGAACTAGCCCAACTAGAGCAGCGCTGGGTTA AGCAGCGATTTAGTTATCTAGAATATGATAATCGAGCGAGATATTATCAATCACCTAGCTTGTTTGGGGCTTGGATTGTA TTGGGATTAGGCTTGGGGTTGGTTGGTTTTGGTGTGATGTTGGCTGTTGAAGGGCATAAATTGCTCTATCCGATGCTGTG TTGTGCTTTTGGCCTGCTTATGGTGCTAAGTTTTTCAACGATCCGTAAGCAAGCGACAGAGCTTGATCAGGCTGAGCAAC ACTATTTTGCCCAACGCCAACGAATTAGCCACGATTATGGGCGCTAA
Upstream 100 bases:
>100_bases AATGAATAACGTAACCTTCCTGCTAGGGCAACGTATGAAATAACAGGAAGGTTTTTGTTGTTTAAATGACCGAAAAACAT TCGATTATGAGGTTAGGAAT
Downstream 100 bases:
>100_bases AACTAAAGATATTATCGTTGTTAATGCTTTCGATGAGGTGTATCTGATGCAAAAAACAACCAATGATCATGACCCTTTGG CCGAACTCGATCGACAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MLKKSEIHEMIDQAIEANSEAEKALEPDPNVDPVTYLDQQWRQERAKYVGVYYLDHSRSMGNPLALVIFFFMCFGAGIML WIEASRLPISMFYCVSIFFILTSLLILWALRNAIMLMLAERRYLKKRAILIKQYGDPTLIVELPVATRRLGYSWPKNSRS EAETRFHELQAEYYDVSTRDQAYNEQIQRLIAHTPAPDQRYLTELAQLEQRWVKQRFSYLEYDNRARYYQSPSLFGAWIV LGLGLGLVGFGVMLAVEGHKLLYPMLCCAFGLLMVLSFSTIRKQATELDQAEQHYFAQRQRISHDYGR
Sequences:
>Translated_308_residues MLKKSEIHEMIDQAIEANSEAEKALEPDPNVDPVTYLDQQWRQERAKYVGVYYLDHSRSMGNPLALVIFFFMCFGAGIML WIEASRLPISMFYCVSIFFILTSLLILWALRNAIMLMLAERRYLKKRAILIKQYGDPTLIVELPVATRRLGYSWPKNSRS EAETRFHELQAEYYDVSTRDQAYNEQIQRLIAHTPAPDQRYLTELAQLEQRWVKQRFSYLEYDNRARYYQSPSLFGAWIV LGLGLGLVGFGVMLAVEGHKLLYPMLCCAFGLLMVLSFSTIRKQATELDQAEQHYFAQRQRISHDYGR >Mature_308_residues MLKKSEIHEMIDQAIEANSEAEKALEPDPNVDPVTYLDQQWRQERAKYVGVYYLDHSRSMGNPLALVIFFFMCFGAGIML WIEASRLPISMFYCVSIFFILTSLLILWALRNAIMLMLAERRYLKKRAILIKQYGDPTLIVELPVATRRLGYSWPKNSRS EAETRFHELQAEYYDVSTRDQAYNEQIQRLIAHTPAPDQRYLTELAQLEQRWVKQRFSYLEYDNRARYYQSPSLFGAWIV LGLGLGLVGFGVMLAVEGHKLLYPMLCCAFGLLMVLSFSTIRKQATELDQAEQHYFAQRQRISHDYGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35938; Mature: 35938
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKSEIHEMIDQAIEANSEAEKALEPDPNVDPVTYLDQQWRQERAKYVGVYYLDHSRSM CCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCC GNPLALVIFFFMCFGAGIMLWIEASRLPISMFYCVSIFFILTSLLILWALRNAIMLMLAE CCHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRYLKKRAILIKQYGDPTLIVELPVATRRLGYSWPKNSRSEAETRFHELQAEYYDVSTRD HHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH QAYNEQIQRLIAHTPAPDQRYLTELAQLEQRWVKQRFSYLEYDNRARYYQSPSLFGAWIV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH LGLGLGLVGFGVMLAVEGHKLLYPMLCCAFGLLMVLSFSTIRKQATELDQAEQHYFAQRQ HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RISHDYGR HHHHCCCC >Mature Secondary Structure MLKKSEIHEMIDQAIEANSEAEKALEPDPNVDPVTYLDQQWRQERAKYVGVYYLDHSRSM CCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCC GNPLALVIFFFMCFGAGIMLWIEASRLPISMFYCVSIFFILTSLLILWALRNAIMLMLAE CCHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRYLKKRAILIKQYGDPTLIVELPVATRRLGYSWPKNSRSEAETRFHELQAEYYDVSTRD HHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH QAYNEQIQRLIAHTPAPDQRYLTELAQLEQRWVKQRFSYLEYDNRARYYQSPSLFGAWIV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHH LGLGLGLVGFGVMLAVEGHKLLYPMLCCAFGLLMVLSFSTIRKQATELDQAEQHYFAQRQ HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RISHDYGR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA