Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898314

Identifier: 159898314

GI number: 159898314

Start: 2078953

End: 2079894

Strand: Direct

Name: 159898314

Synonym: Haur_1790

Alternate gene names: NA

Gene position: 2078953-2079894 (Clockwise)

Preceding gene: 159898313

Following gene: 159898315

Centisome position: 32.76

GC content: 41.51

Gene sequence:

>942_bases
ATGAATGAAGAATGGGATATTCACAGTAGCCAACGGCCATCAATTCGCCAATTTATTGATCTTGCCAAACGCGAACATGA
TGCCGCAATGCAAGCCTTAGAACCAGACCCTAACGCTGACCCATTAACCCAGCTTGATCTGCAATGGGCTAAAGAAAGCA
TAAAATATACAACATCACAGCGATCACAATTTGGGATTGCAGTCAAACAAAAGCCTCAGCCATTTATGCTGATGGGATTC
ACGCTCGTTTTTATTGTAATTACGAGCATACTGGTTGTATTTAAAGTCTATTGTATTAGCTTTTTCTTCTTGCCGTTCAT
CATTCTGATGCTGTTTGGTGTGCGGCATCAATTGCGTTTTGCCAAGGCGCAAAAGGATTATTTGGCTAAGCGTACCCAAT
TAATTGCCCAATTGGGTTTAAAACCTGAGCAAGTTCCGTTAGCTCCAGTCGTAGAAAAACCGCTGGTTCATCGTACTCCA
TTGCTTTCGGCGGAATCGCAAATTCGCCAACTGCAACATCATTATCATGGAATTCACGATCAAGAACAATATCGCCGTTC
AGTTAAAAGCATTATTGCCAACGCCCCTGAGCACGAGCGCGATTATCTCAGAGCTTTGGCGGCAATCGAAGCTGAATGGG
TTCAAGCGCGACTTAAATATATTCGCTTTGAAAATGGCCGTCGTGAACAAAGAATTCCACAAGCAATGAATCAATGGCTT
ATATTGATTGTTTGTGTTGTTTTTGCGGCTGTTGGATTTTTAAGCTATTTCCCATCTGGCAACTGGTTTAACTTGAGTAT
TTGGATTGCCATTCCTAGTGTGATTGCAATTGTGGCAATTCAATCAACTAAAAATACCAAAAAATATCGTGAATTAGAGC
AATATTACGCCGAAAAACGCAACCAATTGCAAAGCCGCTTTCGCAATCGAACACCTTTCTAA

Upstream 100 bases:

>100_bases
TTTTGATCAATAGCGTAACGTTCTTGCCGTGTGATACGTGTATCCAACAAGAACGTTACGCTATTGATTATTTAACCAGT
ACAAAAAGCAGAGGTTGATT

Downstream 100 bases:

>100_bases
TGCTGGACGCATAAGTTTACAAAATGAATAACGTAACCTTCCTGCTAGGGCAACGTATGAAATAACAGGAAGGTTTTTGT
TGTTTAAATGACCGAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQRSQFGIAVKQKPQPFMLMGF
TLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRFAKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTP
LLSAESQIRQLQHHYHGIHDQEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL
ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKRNQLQSRFRNRTPF

Sequences:

>Translated_313_residues
MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQRSQFGIAVKQKPQPFMLMGF
TLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRFAKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTP
LLSAESQIRQLQHHYHGIHDQEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL
ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKRNQLQSRFRNRTPF
>Mature_313_residues
MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQRSQFGIAVKQKPQPFMLMGF
TLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRFAKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTP
LLSAESQIRQLQHHYHGIHDQEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL
ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKRNQLQSRFRNRTPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36625; Mature: 36625

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RSQFGIAVKQKPQPFMLMGFTLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRF
HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTPLLSAESQIRQLQHHYHGIHD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCC
QEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKR
HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
NQLQSRFRNRTPF
HHHHHHHCCCCCC
>Mature Secondary Structure
MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RSQFGIAVKQKPQPFMLMGFTLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRF
HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTPLLSAESQIRQLQHHYHGIHD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCC
QEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKR
HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
NQLQSRFRNRTPF
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA