| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898307
Identifier: 159898307
GI number: 159898307
Start: 2071817
End: 2072260
Strand: Direct
Name: 159898307
Synonym: Haur_1783
Alternate gene names: NA
Gene position: 2071817-2072260 (Clockwise)
Preceding gene: 159898306
Following gene: 159898308
Centisome position: 32.64
GC content: 53.38
Gene sequence:
>444_bases ATGGCCGAATCTCTTGAAACTGATTTACAACTAACCTGGCGCAGCCTTGGTATGCAATCGTCTGATCGAATTGCAGTTGA TTTGATGGCTGAGCGCAGCGATTTGGCCTTGGTTAGCGGTCGGGCTAATTTGGCGCAGGCAATTGTTAATCGGCTCTTGA CCCGCCAAGGCGAATTGAGCTTGCTTGGGCATCCCGATTATGGCTCACGCTTGTATTTGCTGGTTGGCGAGCCACAAAGC CGCCGCACTCATCTGCGGGCTGAGTTTTATGTGCGCGAAAGTTTGGGCTTCGAACGCCGCATTAGTGAGGTTGTTTCGGT CACAATCGCGCCAATTATGCCGCGCTCGGATCAACGCTCAACCCTCGAATTGCAGGTCGTGGTGCGGCCAATCGATCAAT CGGAGCCGTTGGTGGTGAATATAGCAGTAGCCTTGGAGGGCTAG
Upstream 100 bases:
>100_bases TCGCGCAGGCGATCAAGCGACGACCTGCGACGAAGCCAAGGTTAAAGGTGTGGTGGTGGCGGTTGGAACTGTCATGATTG GCGATTAAGCGAGGTGTGCA
Downstream 100 bases:
>100_bases CGTGACGATTCATAAAAAACAATTTAATGATATTTATGCCAGCATGGTTGCCGATTCGCGCCAGCGCTTGCCACGGCTCT CCGATTTTGAAGAAGGCAGC
Product: GPW/gp25 family protein
Products: NA
Alternate protein names: GpW/GP25 Family Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAESLETDLQLTWRSLGMQSSDRIAVDLMAERSDLALVSGRANLAQAIVNRLLTRQGELSLLGHPDYGSRLYLLVGEPQS RRTHLRAEFYVRESLGFERRISEVVSVTIAPIMPRSDQRSTLELQVVVRPIDQSEPLVVNIAVALEG
Sequences:
>Translated_147_residues MAESLETDLQLTWRSLGMQSSDRIAVDLMAERSDLALVSGRANLAQAIVNRLLTRQGELSLLGHPDYGSRLYLLVGEPQS RRTHLRAEFYVRESLGFERRISEVVSVTIAPIMPRSDQRSTLELQVVVRPIDQSEPLVVNIAVALEG >Mature_146_residues AESLETDLQLTWRSLGMQSSDRIAVDLMAERSDLALVSGRANLAQAIVNRLLTRQGELSLLGHPDYGSRLYLLVGEPQSR RTHLRAEFYVRESLGFERRISEVVSVTIAPIMPRSDQRSTLELQVVVRPIDQSEPLVVNIAVALEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16412; Mature: 16281
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESLETDLQLTWRSLGMQSSDRIAVDLMAERSDLALVSGRANLAQAIVNRLLTRQGELS CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCEE LLGHPDYGSRLYLLVGEPQSRRTHLRAEFYVRESLGFERRISEVVSVTIAPIMPRSDQRS EEECCCCCCEEEEEEECCCCCHHEEHHEEEEHHHCCHHHHHHHHHHHHEECCCCCCCCCC TLELQVVVRPIDQSEPLVVNIAVALEG EEEEEEEEEECCCCCCEEEEEEEEECC >Mature Secondary Structure AESLETDLQLTWRSLGMQSSDRIAVDLMAERSDLALVSGRANLAQAIVNRLLTRQGELS CCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCEE LLGHPDYGSRLYLLVGEPQSRRTHLRAEFYVRESLGFERRISEVVSVTIAPIMPRSDQRS EEECCCCCCEEEEEEECCCCCHHEEHHEEEEHHHCCHHHHHHHHHHHHEECCCCCCCCCC TLELQVVVRPIDQSEPLVVNIAVALEG EEEEEEEEEECCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA