Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898308

Identifier: 159898308

GI number: 159898308

Start: 2072262

End: 2074331

Strand: Direct

Name: 159898308

Synonym: Haur_1784

Alternate gene names: NA

Gene position: 2072262-2074331 (Clockwise)

Preceding gene: 159898307

Following gene: 159898309

Centisome position: 32.65

GC content: 49.66

Gene sequence:

>2070_bases
GTGACGATTCATAAAAAACAATTTAATGATATTTATGCCAGCATGGTTGCCGATTCGCGCCAGCGCTTGCCACGGCTCTC
CGATTTTGAAGAAGGCAGCGTAGTTCGTTCGCTGTTTGAATCGTTTGCCTATGAGCTAGCCGTGCTGTATGAGCAGATGG
ATCTGGTTTATCAGGCTGGCTTTATCGATACCGCTGAGGGGGCACAACTTGATCGGGTGGTGGCGATTTTAGGCATCAAG
CGCAACGAGCCAGATTTTGCAACAGGTAGTGTTACCTTTCAACGCGATAGCACCAGCGAAGAAACCTTGATTCCAATTGG
CACGCTGATTACCACCAAGGAAGATCCCAAACAAACGCCCTCCAAAAAGGCCTATATCACAACTGAAGAGGGGCGAATTG
CCCCAGGTACAGCCACGGTTGAGGTGCATGTACGGGCCGAAGAGCGCGGCAAACACATGACTACCGCTGAGCAAACGGTG
ATCGTGATGCCCCGCCCATTGCCTGGCATCAAATCGGTGACCAATCCTAAAGCAATTGGCTTTCGTGGGCGTGAGCGCGA
AACCGATCAAGAATTGCGTGAGCGTGCCAAACAAACCTTGCTGGCTTCAGGCCGCGCCTCAAGTTTATCGATTGAAAATG
CCTTGTTGAGTTTGCCCGAAGTCCGCGAAGTGCGGATTCACGAAGATTTTCATAATAATCCTGAAGGCCGCCCAGGCTCG
ATCGAAGTCTTTGTTGATGGCATGAACGAGCATAACGAGCGCCAATTGCGTCAACGTTTGGATGAGGTGCGGGCCGCCGG
GATTTATGTGGTGCTTAAGCCAGCAGCACCGATTAATGTTGATGCAGTGATTCATATTGCAGCGAACGAGCAGATTGCGA
ATGCTGAAAAAGGCCTGCTTGAAACCCAAGTGCGCGAAGCAGTTGAGGCCTACTTTGGCCGTTTGGGTATGGGCCAGCCC
TTGCTTTTCTCGCAAATTACCAGCGAAATTTTGCAAGTCAAAGGCGTAAACGATCTGATTAATTTGGAATTGCAGCTTTA
TCGTGAGGCCGAAAGCAAAGCCCAAGGCCTTGTGCAGTTGACTCGTAGCACTAATTTGAGCCAAACCTTATTGATCGAGT
TGCCATGTGAATTGCGCACGCTAGATAATCAACGCTTTTTGGCAACCAATCCTGCAAGTTTTGCTCCCAACCAAGCGATG
ATTGAGCTTCAAGTGCAGGCGATGTTGGCTGGACGCAGCGGCGAACTAGCAACCAGTGCCGCCTTGTGGGAAGAATTGGT
GATCAACCAAACTAAATTGACGATTAGCAATCCCCAGCCAATTTTATTGCAACGCACCAAACACACGCCCCAAGATAAGC
GTTTGGAAAGCGCCATTTCCGAGCTTTTCAACGCTGCTAGCATTCGAGTAGCGGCTGAGCCAAAGGATTTGCCAATTTTA
ATCTTTATTAAATTAGTTGAGCCAGGCTTGGAGCGCGACGAGAAACGTCGCAAAATCGAAGGCGCAATTCAAGAATATAT
TGCTGGTTTGACGCTTGGCTCAGCCATCCAAGCTAGCGAAATCGAGAAGAAAATTCGGCTCTATCATCGCAAAGATTTTA
GCTTGCGCATGTTGGCAAAGCCCTTTCAAAGCAACGAACGCCCCGAAGATAGTGCGATTCAGGTCAGTATTATTGAACGG
CCTGTGTTGGCTAACCTGCTGATCTATAGCGAGCGCGTCGAATTAACTGGCAAACTTGAGTTGACGGTTGCGCCCACGAC
CAGCGATAGCCAACGCCGCCAAATTTGCTATGAAGTGCGACGGGCAATTATGGCCTATCTCGATGATTTGGCTCCAGAGC
AGGATTTAGAGCTAGCCCAAATCGAAGCGCTTGCCAAAGCCCAGCTTCAAGTATTGCAAGTTGCTTTCAACCCTAAACAC
TGCCAGCTCTACAATGTCTCGACCAATCCAGTTGGTGTGCTGGCTGAGCGCAATAACGGCAAAGTCGTCAAAATCGCCAG
CTTCGAGAAGGTTTTTCTTGCCAGCGATAGTGCCAGCGATCCGGCGCTGCGCTTTGTGATACAGGCTTAA

Upstream 100 bases:

>100_bases
TCGGATCAACGCTCAACCCTCGAATTGCAGGTCGTGGTGCGGCCAATCGATCAATCGGAGCCGTTGGTGGTGAATATAGC
AGTAGCCTTGGAGGGCTAGC

Downstream 100 bases:

>100_bases
TTATGCAACGATTAACTGGCAAAACGATCGCCCTATTGCAACGCTTGGCTCATTTTTATGCCCCAGCCGAGGCGGGTGAG
TTGCTGTTGCTGTTCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Baseplate Assembly Protein; PBSX Prophage

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MTIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAGFIDTAEGAQLDRVVAILGIK
RNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTPSKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTV
IVMPRPLPGIKSVTNPKAIGFRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS
IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLLETQVREAVEAYFGRLGMGQP
LLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQLTRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAM
IELQVQAMLAGRSGELATSAALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL
IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAKPFQSNERPEDSAIQVSIIER
PVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVRRAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKH
CQLYNVSTNPVGVLAERNNGKVVKIASFEKVFLASDSASDPALRFVIQA

Sequences:

>Translated_689_residues
MTIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAGFIDTAEGAQLDRVVAILGIK
RNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTPSKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTV
IVMPRPLPGIKSVTNPKAIGFRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS
IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLLETQVREAVEAYFGRLGMGQP
LLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQLTRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAM
IELQVQAMLAGRSGELATSAALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL
IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAKPFQSNERPEDSAIQVSIIER
PVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVRRAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKH
CQLYNVSTNPVGVLAERNNGKVVKIASFEKVFLASDSASDPALRFVIQA
>Mature_688_residues
TIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAGFIDTAEGAQLDRVVAILGIKR
NEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTPSKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTVI
VMPRPLPGIKSVTNPKAIGFRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGSI
EVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLLETQVREAVEAYFGRLGMGQPL
LFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQLTRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAMI
ELQVQAMLAGRSGELATSAALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPILI
FIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAKPFQSNERPEDSAIQVSIIERP
VLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVRRAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKHC
QLYNVSTNPVGVLAERNNGKVVKIASFEKVFLASDSASDPALRFVIQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76853; Mature: 76722

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FIDTAEGAQLDRVVAILGIKRNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTP
CCCCCCCCHHHHEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
SKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTVIVMPRPLPGIKSVTNPKAIG
CCCEEEEECCCEECCCCEEEEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
FRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCHHEEEEEHHHCCCCCCCCCE
IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLL
EEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHH
ETQVREAVEAYFGRLGMGQPLLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAMIELQVQAMLAGRSGELATSA
HCCCCCCEEEEEECCCHHEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCHHHHH
ALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL
HHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEE
IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHC
PFQSNERPEDSAIQVSIIERPVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVR
HHCCCCCCCCCCEEEEEECCCHHHHHHHEECCEEEEEEEEEEEECCCCCHHHHHHHHHHH
RAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKHCQLYNVSTNPVGVLAERNNG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEECCCC
KVVKIASFEKVFLASDSASDPALRFVIQA
CEEEEECCCEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure 
TIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FIDTAEGAQLDRVVAILGIKRNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTP
CCCCCCCCHHHHEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
SKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTVIVMPRPLPGIKSVTNPKAIG
CCCEEEEECCCEECCCCEEEEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
FRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS
CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCHHEEEEEHHHCCCCCCCCCE
IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLL
EEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHH
ETQVREAVEAYFGRLGMGQPLLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAMIELQVQAMLAGRSGELATSA
HCCCCCCEEEEEECCCHHEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCHHHHH
ALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL
HHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEE
IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAK
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHC
PFQSNERPEDSAIQVSIIERPVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVR
HHCCCCCCCCCCEEEEEECCCHHHHHHHEECCEEEEEEEEEEEECCCCCHHHHHHHHHHH
RAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKHCQLYNVSTNPVGVLAERNNG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEECCCC
KVVKIASFEKVFLASDSASDPALRFVIQA
CEEEEECCCEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA