| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898308
Identifier: 159898308
GI number: 159898308
Start: 2072262
End: 2074331
Strand: Direct
Name: 159898308
Synonym: Haur_1784
Alternate gene names: NA
Gene position: 2072262-2074331 (Clockwise)
Preceding gene: 159898307
Following gene: 159898309
Centisome position: 32.65
GC content: 49.66
Gene sequence:
>2070_bases GTGACGATTCATAAAAAACAATTTAATGATATTTATGCCAGCATGGTTGCCGATTCGCGCCAGCGCTTGCCACGGCTCTC CGATTTTGAAGAAGGCAGCGTAGTTCGTTCGCTGTTTGAATCGTTTGCCTATGAGCTAGCCGTGCTGTATGAGCAGATGG ATCTGGTTTATCAGGCTGGCTTTATCGATACCGCTGAGGGGGCACAACTTGATCGGGTGGTGGCGATTTTAGGCATCAAG CGCAACGAGCCAGATTTTGCAACAGGTAGTGTTACCTTTCAACGCGATAGCACCAGCGAAGAAACCTTGATTCCAATTGG CACGCTGATTACCACCAAGGAAGATCCCAAACAAACGCCCTCCAAAAAGGCCTATATCACAACTGAAGAGGGGCGAATTG CCCCAGGTACAGCCACGGTTGAGGTGCATGTACGGGCCGAAGAGCGCGGCAAACACATGACTACCGCTGAGCAAACGGTG ATCGTGATGCCCCGCCCATTGCCTGGCATCAAATCGGTGACCAATCCTAAAGCAATTGGCTTTCGTGGGCGTGAGCGCGA AACCGATCAAGAATTGCGTGAGCGTGCCAAACAAACCTTGCTGGCTTCAGGCCGCGCCTCAAGTTTATCGATTGAAAATG CCTTGTTGAGTTTGCCCGAAGTCCGCGAAGTGCGGATTCACGAAGATTTTCATAATAATCCTGAAGGCCGCCCAGGCTCG ATCGAAGTCTTTGTTGATGGCATGAACGAGCATAACGAGCGCCAATTGCGTCAACGTTTGGATGAGGTGCGGGCCGCCGG GATTTATGTGGTGCTTAAGCCAGCAGCACCGATTAATGTTGATGCAGTGATTCATATTGCAGCGAACGAGCAGATTGCGA ATGCTGAAAAAGGCCTGCTTGAAACCCAAGTGCGCGAAGCAGTTGAGGCCTACTTTGGCCGTTTGGGTATGGGCCAGCCC TTGCTTTTCTCGCAAATTACCAGCGAAATTTTGCAAGTCAAAGGCGTAAACGATCTGATTAATTTGGAATTGCAGCTTTA TCGTGAGGCCGAAAGCAAAGCCCAAGGCCTTGTGCAGTTGACTCGTAGCACTAATTTGAGCCAAACCTTATTGATCGAGT TGCCATGTGAATTGCGCACGCTAGATAATCAACGCTTTTTGGCAACCAATCCTGCAAGTTTTGCTCCCAACCAAGCGATG ATTGAGCTTCAAGTGCAGGCGATGTTGGCTGGACGCAGCGGCGAACTAGCAACCAGTGCCGCCTTGTGGGAAGAATTGGT GATCAACCAAACTAAATTGACGATTAGCAATCCCCAGCCAATTTTATTGCAACGCACCAAACACACGCCCCAAGATAAGC GTTTGGAAAGCGCCATTTCCGAGCTTTTCAACGCTGCTAGCATTCGAGTAGCGGCTGAGCCAAAGGATTTGCCAATTTTA ATCTTTATTAAATTAGTTGAGCCAGGCTTGGAGCGCGACGAGAAACGTCGCAAAATCGAAGGCGCAATTCAAGAATATAT TGCTGGTTTGACGCTTGGCTCAGCCATCCAAGCTAGCGAAATCGAGAAGAAAATTCGGCTCTATCATCGCAAAGATTTTA GCTTGCGCATGTTGGCAAAGCCCTTTCAAAGCAACGAACGCCCCGAAGATAGTGCGATTCAGGTCAGTATTATTGAACGG CCTGTGTTGGCTAACCTGCTGATCTATAGCGAGCGCGTCGAATTAACTGGCAAACTTGAGTTGACGGTTGCGCCCACGAC CAGCGATAGCCAACGCCGCCAAATTTGCTATGAAGTGCGACGGGCAATTATGGCCTATCTCGATGATTTGGCTCCAGAGC AGGATTTAGAGCTAGCCCAAATCGAAGCGCTTGCCAAAGCCCAGCTTCAAGTATTGCAAGTTGCTTTCAACCCTAAACAC TGCCAGCTCTACAATGTCTCGACCAATCCAGTTGGTGTGCTGGCTGAGCGCAATAACGGCAAAGTCGTCAAAATCGCCAG CTTCGAGAAGGTTTTTCTTGCCAGCGATAGTGCCAGCGATCCGGCGCTGCGCTTTGTGATACAGGCTTAA
Upstream 100 bases:
>100_bases TCGGATCAACGCTCAACCCTCGAATTGCAGGTCGTGGTGCGGCCAATCGATCAATCGGAGCCGTTGGTGGTGAATATAGC AGTAGCCTTGGAGGGCTAGC
Downstream 100 bases:
>100_bases TTATGCAACGATTAACTGGCAAAACGATCGCCCTATTGCAACGCTTGGCTCATTTTTATGCCCCAGCCGAGGCGGGTGAG TTGCTGTTGCTGTTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Baseplate Assembly Protein; PBSX Prophage
Number of amino acids: Translated: 689; Mature: 688
Protein sequence:
>689_residues MTIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAGFIDTAEGAQLDRVVAILGIK RNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTPSKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTV IVMPRPLPGIKSVTNPKAIGFRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLLETQVREAVEAYFGRLGMGQP LLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQLTRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAM IELQVQAMLAGRSGELATSAALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAKPFQSNERPEDSAIQVSIIER PVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVRRAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKH CQLYNVSTNPVGVLAERNNGKVVKIASFEKVFLASDSASDPALRFVIQA
Sequences:
>Translated_689_residues MTIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAGFIDTAEGAQLDRVVAILGIK RNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTPSKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTV IVMPRPLPGIKSVTNPKAIGFRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLLETQVREAVEAYFGRLGMGQP LLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQLTRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAM IELQVQAMLAGRSGELATSAALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAKPFQSNERPEDSAIQVSIIER PVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVRRAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKH CQLYNVSTNPVGVLAERNNGKVVKIASFEKVFLASDSASDPALRFVIQA >Mature_688_residues TIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAGFIDTAEGAQLDRVVAILGIKR NEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTPSKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTVI VMPRPLPGIKSVTNPKAIGFRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGSI EVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLLETQVREAVEAYFGRLGMGQPL LFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQLTRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAMI ELQVQAMLAGRSGELATSAALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPILI FIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAKPFQSNERPEDSAIQVSIIERP VLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVRRAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKHC QLYNVSTNPVGVLAERNNGKVVKIASFEKVFLASDSASDPALRFVIQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76853; Mature: 76722
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAG CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FIDTAEGAQLDRVVAILGIKRNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTP CCCCCCCCHHHHEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC SKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTVIVMPRPLPGIKSVTNPKAIG CCCEEEEECCCEECCCCEEEEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC FRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCHHEEEEEHHHCCCCCCCCCE IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLL EEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHH ETQVREAVEAYFGRLGMGQPLLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAMIELQVQAMLAGRSGELATSA HCCCCCCEEEEEECCCHHEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCHHHHH ALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL HHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEE IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHC PFQSNERPEDSAIQVSIIERPVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVR HHCCCCCCCCCCEEEEEECCCHHHHHHHEECCEEEEEEEEEEEECCCCCHHHHHHHHHHH RAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKHCQLYNVSTNPVGVLAERNNG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEECCCC KVVKIASFEKVFLASDSASDPALRFVIQA CEEEEECCCEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure TIHKKQFNDIYASMVADSRQRLPRLSDFEEGSVVRSLFESFAYELAVLYEQMDLVYQAG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC FIDTAEGAQLDRVVAILGIKRNEPDFATGSVTFQRDSTSEETLIPIGTLITTKEDPKQTP CCCCCCCCHHHHEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCC SKKAYITTEEGRIAPGTATVEVHVRAEERGKHMTTAEQTVIVMPRPLPGIKSVTNPKAIG CCCEEEEECCCEECCCCEEEEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC FRGRERETDQELRERAKQTLLASGRASSLSIENALLSLPEVREVRIHEDFHNNPEGRPGS CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCHHEEEEEHHHCCCCCCCCCE IEVFVDGMNEHNERQLRQRLDEVRAAGIYVVLKPAAPINVDAVIHIAANEQIANAEKGLL EEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHH ETQVREAVEAYFGRLGMGQPLLFSQITSEILQVKGVNDLINLELQLYREAESKAQGLVQL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TRSTNLSQTLLIELPCELRTLDNQRFLATNPASFAPNQAMIELQVQAMLAGRSGELATSA HCCCCCCEEEEEECCCHHEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCHHHHH ALWEELVINQTKLTISNPQPILLQRTKHTPQDKRLESAISELFNAASIRVAAEPKDLPIL HHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEE IFIKLVEPGLERDEKRRKIEGAIQEYIAGLTLGSAIQASEIEKKIRLYHRKDFSLRMLAK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHC PFQSNERPEDSAIQVSIIERPVLANLLIYSERVELTGKLELTVAPTTSDSQRRQICYEVR HHCCCCCCCCCCEEEEEECCCHHHHHHHEECCEEEEEEEEEEEECCCCCHHHHHHHHHHH RAIMAYLDDLAPEQDLELAQIEALAKAQLQVLQVAFNPKHCQLYNVSTNPVGVLAERNNG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEECCCC KVVKIASFEKVFLASDSASDPALRFVIQA CEEEEECCCEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA