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The map label for this gene is ycgR [H]

Identifier: 159898218

GI number: 159898218

Start: 1968472

End: 1969548

Strand: Direct

Name: ycgR [H]

Synonym: Haur_1694

Alternate gene names: 159898218

Gene position: 1968472-1969548 (Clockwise)

Preceding gene: 159898217

Following gene: 159898219

Centisome position: 31.02

GC content: 49.95

Gene sequence:

>1077_bases
ATGGCTGTTGTCAGTATCGATGTTAAACCCAAAAACCAACGCAAATGGCTACTCTTTTTCGCGCCAATCATCGGCATTCT
TGGGCTGTGGCTGGCGAGCGGCTGGCTTGTCCCAAGCAATTTAGCCCCCTTAACCAACAAACTTCAAGGCTTAGTCACCA
CCTTTCAAGGGATTTTTATTGAGGCGCTGCCCTTTCTTAGTGCAGGGGTGATTGTTTCGGTATTAATTGGCGAGTTCGTC
AAGCCGCAGCATTTGGCCAGTTTTGTGCCCCAAAATGCCTTTGGAGCCTCAATTTTTGGCTCGCTTTTGGGCTTGCTGTT
TCCGGTCTGCGAGTGTGGGGCGATTCCAACCAGTCGGCGGTTGTTGCGCAAAGGCGCACCAGCCTCAATGGGAATTGCCT
TTGCCTTAGCGGCCCCCGTGGTCAACCCAATTGTGCTGATCTCAACCTCGATTGCCTTTGGCGATGTGCGTTGGGCTTTG
GCGCGGGTCGGCTTTACAATCATCATTGCCTTAACAATTGGCTTGATTATTGGAGCTGGAATTAAACGCGAAGCAATTTT
GACCCCACTTGCCCTAACCCCCGATGTTGAACATGATCATAGCCATTGCGACCATGATCATGGTGCTTGCGACCATACCC
ACGAACAACCCAAGGGTCGTTTGGCAGGCCTGATTGCCCACGGCAGCGTTGAATTTTTTGAGATGGCCCAGTATTTGGTG
ATGGGTTCGTTGTTGGCAGCGACTATGCAAACCTTCATTCCCCAATCGGCCTTGCTCACTTTAAATGATAGCGGCATCGG
CTTTTTTGCTCCGTTGTTGGGGATTGTGGTATTGATGTTGGTGGCAGTGCTGCTTTCCGTGTGTTCCACGGTTGATGCTT
TTTTGGCCTTATCGTTCCTTGGCTTGTTTCATCCAGGTGCAGTCATGGCCTTTTTGGTCTTTGGCCCGATGATTGATATT
AAAAGTACCTTGATGCTGACCACGACATTCCGCCGCTCAGCAGTGATGGCAATGGTCGTGCTAGCAGCCTTATTTGCAAT
TATTGCTGGCTTGATCAGCTATGTTGTTTTGATCTGA

Upstream 100 bases:

>100_bases
CTGGGTGTGGGGATCAACCATCTATCGACCTTGATTGTGCTGTTTTCAGCGATGGTATTTTCGGGTATCATGGCAACAGT
CGAACCAACGAGGTGTCCCC

Downstream 100 bases:

>100_bases
GGTGAATGATGCAACGTCAGGTGCTTGAGCGCTGGCTCTCGGTTGGAGTAATGTTTGGGCTTGGCGCGATGATTATCTAC
AAATGGCAAACCAATCGCTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAVVSIDVKPKNQRKWLLFFAPIIGILGLWLASGWLVPSNLAPLTNKLQGLVTTFQGIFIEALPFLSAGVIVSVLIGEFV
KPQHLASFVPQNAFGASIFGSLLGLLFPVCECGAIPTSRRLLRKGAPASMGIAFALAAPVVNPIVLISTSIAFGDVRWAL
ARVGFTIIIALTIGLIIGAGIKREAILTPLALTPDVEHDHSHCDHDHGACDHTHEQPKGRLAGLIAHGSVEFFEMAQYLV
MGSLLAATMQTFIPQSALLTLNDSGIGFFAPLLGIVVLMLVAVLLSVCSTVDAFLALSFLGLFHPGAVMAFLVFGPMIDI
KSTLMLTTTFRRSAVMAMVVLAALFAIIAGLISYVVLI

Sequences:

>Translated_358_residues
MAVVSIDVKPKNQRKWLLFFAPIIGILGLWLASGWLVPSNLAPLTNKLQGLVTTFQGIFIEALPFLSAGVIVSVLIGEFV
KPQHLASFVPQNAFGASIFGSLLGLLFPVCECGAIPTSRRLLRKGAPASMGIAFALAAPVVNPIVLISTSIAFGDVRWAL
ARVGFTIIIALTIGLIIGAGIKREAILTPLALTPDVEHDHSHCDHDHGACDHTHEQPKGRLAGLIAHGSVEFFEMAQYLV
MGSLLAATMQTFIPQSALLTLNDSGIGFFAPLLGIVVLMLVAVLLSVCSTVDAFLALSFLGLFHPGAVMAFLVFGPMIDI
KSTLMLTTTFRRSAVMAMVVLAALFAIIAGLISYVVLI
>Mature_357_residues
AVVSIDVKPKNQRKWLLFFAPIIGILGLWLASGWLVPSNLAPLTNKLQGLVTTFQGIFIEALPFLSAGVIVSVLIGEFVK
PQHLASFVPQNAFGASIFGSLLGLLFPVCECGAIPTSRRLLRKGAPASMGIAFALAAPVVNPIVLISTSIAFGDVRWALA
RVGFTIIIALTIGLIIGAGIKREAILTPLALTPDVEHDHSHCDHDHGACDHTHEQPKGRLAGLIAHGSVEFFEMAQYLVM
GSLLAATMQTFIPQSALLTLNDSGIGFFAPLLGIVVLMLVAVLLSVCSTVDAFLALSFLGLFHPGAVMAFLVFGPMIDIK
STLMLTTTFRRSAVMAMVVLAALFAIIAGLISYVVLI

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 37992; Mature: 37861

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVSIDVKPKNQRKWLLFFAPIIGILGLWLASGWLVPSNLAPLTNKLQGLVTTFQGIFI
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EALPFLSAGVIVSVLIGEFVKPQHLASFVPQNAFGASIFGSLLGLLFPVCECGAIPTSRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
LLRKGAPASMGIAFALAAPVVNPIVLISTSIAFGDVRWALARVGFTIIIALTIGLIIGAG
HHHCCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IKREAILTPLALTPDVEHDHSHCDHDHGACDHTHEQPKGRLAGLIAHGSVEFFEMAQYLV
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
MGSLLAATMQTFIPQSALLTLNDSGIGFFAPLLGIVVLMLVAVLLSVCSTVDAFLALSFL
HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFHPGAVMAFLVFGPMIDIKSTLMLTTTFRRSAVMAMVVLAALFAIIAGLISYVVLI
HHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AVVSIDVKPKNQRKWLLFFAPIIGILGLWLASGWLVPSNLAPLTNKLQGLVTTFQGIFI
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EALPFLSAGVIVSVLIGEFVKPQHLASFVPQNAFGASIFGSLLGLLFPVCECGAIPTSRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
LLRKGAPASMGIAFALAAPVVNPIVLISTSIAFGDVRWALARVGFTIIIALTIGLIIGAG
HHHCCCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IKREAILTPLALTPDVEHDHSHCDHDHGACDHTHEQPKGRLAGLIAHGSVEFFEMAQYLV
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
MGSLLAATMQTFIPQSALLTLNDSGIGFFAPLLGIVVLMLVAVLLSVCSTVDAFLALSFL
HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFHPGAVMAFLVFGPMIDIKSTLMLTTTFRRSAVMAMVVLAALFAIIAGLISYVVLI
HHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]