| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898208
Identifier: 159898208
GI number: 159898208
Start: 1959538
End: 1960359
Strand: Direct
Name: 159898208
Synonym: Haur_1684
Alternate gene names: NA
Gene position: 1959538-1960359 (Clockwise)
Preceding gene: 159898207
Following gene: 159898209
Centisome position: 30.88
GC content: 45.01
Gene sequence:
>822_bases ATGCGATGGCTCTCTTACTTCTTTCTGATTGTGATTTTGCTGGGACTAAGCATTATCGTGATTGCTGTAGCCCCAATCTT TGGATTGGTAATTACAGGCTCGCTAGTGATAGTCTTGTATCTCGTGTTTTATCTCTGGCCAATTATTGGGGCTTGGTTAA GTTGGTATAGCCTAGGCTTGATTTATCAGCCTAAAAAGAAGTTGCGTTACTGGGGTTTCGCTATTCTTAGCACTATCTAT GGGCTGGGCATCTTATGCTTAACGATCCATGATTTGTGGCCGTTTGGCGATTGGATCTTGCTGGGCAACAGCCTTGGGAT TCTTGTGCGCAGCGGATTGTATGAGTGGCGAGTTGCTCAAGGGCGGCTTCGACGATTAAGCATTAACCTGTTGGTGGCGG TTATCCTGCCGCTGACTGTCAAAGCATTCGTCGAATATCCTTTAATCAAAGCTCAAGATTGTATGATGCAAGTGGCGCTT GATCAAACAGCTGAGAAACTGGCGCAACGTCAGCTTCAGCATGGCAAATATCCGCCCTATTTGGCCTTCGATCTTGAATT TGATGCCAATGCCTTGGATGGGCAATGTCAAGCATTACTGCAAAAAACAGATCGCTCTTCGCTCTCTATCGCCGATTATG AATATTCAACGTGGCTCTATCAACCGACAGCAACAGGTTATCGCTTAGGCTATTGGTCGCGAGCAATTCGCTTGCTTGAA TCAACGTTATTCTATCGGGTATGTTGGTATGACCCGTCCACCCAACGTAGCGATTGCCAATTTACTACTGAAGAAATCGT ATATCAATTTAAGCAAAAATAG
Upstream 100 bases:
>100_bases CCATAGCTTGGTAATTGACATAACCTTTTGTAACACCTGTGTAACATGACCTCGCTAAACTCAGCCTATCTAAAATGCTG ATTGTTTAGCGAGGTTTTGC
Downstream 100 bases:
>100_bases ACACCTAAACGTATTCAGGATTGATTGCTGGATAACGTTTAATAGATAGAACCAGCAACGAGCCAATGTAATATCACGTT CAATCAAAGCTCCCATCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRWLSYFFLIVILLGLSIIVIAVAPIFGLVITGSLVIVLYLVFYLWPIIGAWLSWYSLGLIYQPKKKLRYWGFAILSTIY GLGILCLTIHDLWPFGDWILLGNSLGILVRSGLYEWRVAQGRLRRLSINLLVAVILPLTVKAFVEYPLIKAQDCMMQVAL DQTAEKLAQRQLQHGKYPPYLAFDLEFDANALDGQCQALLQKTDRSSLSIADYEYSTWLYQPTATGYRLGYWSRAIRLLE STLFYRVCWYDPSTQRSDCQFTTEEIVYQFKQK
Sequences:
>Translated_273_residues MRWLSYFFLIVILLGLSIIVIAVAPIFGLVITGSLVIVLYLVFYLWPIIGAWLSWYSLGLIYQPKKKLRYWGFAILSTIY GLGILCLTIHDLWPFGDWILLGNSLGILVRSGLYEWRVAQGRLRRLSINLLVAVILPLTVKAFVEYPLIKAQDCMMQVAL DQTAEKLAQRQLQHGKYPPYLAFDLEFDANALDGQCQALLQKTDRSSLSIADYEYSTWLYQPTATGYRLGYWSRAIRLLE STLFYRVCWYDPSTQRSDCQFTTEEIVYQFKQK >Mature_273_residues MRWLSYFFLIVILLGLSIIVIAVAPIFGLVITGSLVIVLYLVFYLWPIIGAWLSWYSLGLIYQPKKKLRYWGFAILSTIY GLGILCLTIHDLWPFGDWILLGNSLGILVRSGLYEWRVAQGRLRRLSINLLVAVILPLTVKAFVEYPLIKAQDCMMQVAL DQTAEKLAQRQLQHGKYPPYLAFDLEFDANALDGQCQALLQKTDRSSLSIADYEYSTWLYQPTATGYRLGYWSRAIRLLE STLFYRVCWYDPSTQRSDCQFTTEEIVYQFKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31573; Mature: 31573
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLSYFFLIVILLGLSIIVIAVAPIFGLVITGSLVIVLYLVFYLWPIIGAWLSWYSLGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IYQPKKKLRYWGFAILSTIYGLGILCLTIHDLWPFGDWILLGNSLGILVRSGLYEWRVAQ EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHHHHH GRLRRLSINLLVAVILPLTVKAFVEYPLIKAQDCMMQVALDQTAEKLAQRQLQHGKYPPY HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LAFDLEFDANALDGQCQALLQKTDRSSLSIADYEYSTWLYQPTATGYRLGYWSRAIRLLE EEEEEEECCCCCCHHHHHHHHHCCCCCCEEECEEHHHEEECCCCCCEEHHHHHHHHHHHH STLFYRVCWYDPSTQRSDCQFTTEEIVYQFKQK HHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MRWLSYFFLIVILLGLSIIVIAVAPIFGLVITGSLVIVLYLVFYLWPIIGAWLSWYSLGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IYQPKKKLRYWGFAILSTIYGLGILCLTIHDLWPFGDWILLGNSLGILVRSGLYEWRVAQ EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHHHHH GRLRRLSINLLVAVILPLTVKAFVEYPLIKAQDCMMQVALDQTAEKLAQRQLQHGKYPPY HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LAFDLEFDANALDGQCQALLQKTDRSSLSIADYEYSTWLYQPTATGYRLGYWSRAIRLLE EEEEEEECCCCCCHHHHHHHHHCCCCCCEEECEEHHHEEECCCCCCEEHHHHHHHHHHHH STLFYRVCWYDPSTQRSDCQFTTEEIVYQFKQK HHHHHHEEECCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA