| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898170
Identifier: 159898170
GI number: 159898170
Start: 1904070
End: 1904687
Strand: Direct
Name: 159898170
Synonym: Haur_1646
Alternate gene names: NA
Gene position: 1904070-1904687 (Clockwise)
Preceding gene: 159898169
Following gene: 159898176
Centisome position: 30.0
GC content: 48.71
Gene sequence:
>618_bases TTGGCAACCCTCACTGATTCTTATTTCCCATTTGACCAACCACAGATAGCCTCGATTACCGATCTTGATGCTGATGGCGC ACCAGAATGGCTGTTTGACCATGGTCGAGGATTCGATCTGCTGGCTTGGGTTGGTGATCGCTTCCGCATAAATTATGCAT TTCAGAATCAAGCAACTCGTGTTTTTAGCGCCACAATCAGTTTGGCTCCGCAACTCGATGGAACCCAACATGTAATTACT AGCTTTTTGCCTGATAGCTCTGGCAACCAACCAACGATGAGCCAGATCGAATATGGCTTGCGTGATGGCGAGCTTGAACA GCGCGTACCAGCAGCGCCTGATATCTCACCCAACTATGGTGATGAATACAATTATTCATCGATTGCAACAGTCTATCAGG CGTTATTTGAGCGCAATGATCCGCTACTAGCGCTCGCAATACTAGCCCAACTTGAGCAACCACTGCCAGATCGATGGTCG CAGCATGAAGCGATGGTGTTGAAGGCATTGGCCTTGGAATATAACGGGCAATTTGTTGAAGCCCAGCAATTACTCAATGT GGTAGCCAATGACTCAGAAACCACGGGCTGGTCGCGCTTTGTCCAACAGCGGCGTTGA
Upstream 100 bases:
>100_bases GGTCGATTGGCTTGGGATATATACACCGTGGGCAATGCTCTCGACCGAGGTTGGCTATCAGCCGCTCTATGTGTGACAGC CATGGAGTAGTGCCACAGAT
Downstream 100 bases:
>100_bases TTGGGGTTTGGAATAGGGAAAAATTGGGGCGAACATGATCGAAGCCTGTTGATATTCTCAAATCAACAGGCTTCGCAAGC GTTTAGGCGGCGCTATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MATLTDSYFPFDQPQIASITDLDADGAPEWLFDHGRGFDLLAWVGDRFRINYAFQNQATRVFSATISLAPQLDGTQHVIT SFLPDSSGNQPTMSQIEYGLRDGELEQRVPAAPDISPNYGDEYNYSSIATVYQALFERNDPLLALAILAQLEQPLPDRWS QHEAMVLKALALEYNGQFVEAQQLLNVVANDSETTGWSRFVQQRR
Sequences:
>Translated_205_residues MATLTDSYFPFDQPQIASITDLDADGAPEWLFDHGRGFDLLAWVGDRFRINYAFQNQATRVFSATISLAPQLDGTQHVIT SFLPDSSGNQPTMSQIEYGLRDGELEQRVPAAPDISPNYGDEYNYSSIATVYQALFERNDPLLALAILAQLEQPLPDRWS QHEAMVLKALALEYNGQFVEAQQLLNVVANDSETTGWSRFVQQRR >Mature_204_residues ATLTDSYFPFDQPQIASITDLDADGAPEWLFDHGRGFDLLAWVGDRFRINYAFQNQATRVFSATISLAPQLDGTQHVITS FLPDSSGNQPTMSQIEYGLRDGELEQRVPAAPDISPNYGDEYNYSSIATVYQALFERNDPLLALAILAQLEQPLPDRWSQ HEAMVLKALALEYNGQFVEAQQLLNVVANDSETTGWSRFVQQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23050; Mature: 22919
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLTDSYFPFDQPQIASITDLDADGAPEWLFDHGRGFDLLAWVGDRFRINYAFQNQATR CCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCEEEEECCCEEEEEEEECCHHHH VFSATISLAPQLDGTQHVITSFLPDSSGNQPTMSQIEYGLRDGELEQRVPAAPDISPNYG HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCCC DEYNYSSIATVYQALFERNDPLLALAILAQLEQPLPDRWSQHEAMVLKALALEYNGQFVE CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH AQQLLNVVANDSETTGWSRFVQQRR HHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure ATLTDSYFPFDQPQIASITDLDADGAPEWLFDHGRGFDLLAWVGDRFRINYAFQNQATR CCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCEEEEECCCEEEEEEEECCHHHH VFSATISLAPQLDGTQHVITSFLPDSSGNQPTMSQIEYGLRDGELEQRVPAAPDISPNYG HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCCC DEYNYSSIATVYQALFERNDPLLALAILAQLEQPLPDRWSQHEAMVLKALALEYNGQFVE CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH AQQLLNVVANDSETTGWSRFVQQRR HHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA