Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898169

Identifier: 159898169

GI number: 159898169

Start: 1902483

End: 1904045

Strand: Direct

Name: 159898169

Synonym: Haur_1645

Alternate gene names: NA

Gene position: 1902483-1904045 (Clockwise)

Preceding gene: 159898168

Following gene: 159898170

Centisome position: 29.98

GC content: 52.34

Gene sequence:

>1563_bases
ATGATGCAGATTGCCCGAATGAGTTTGTTGGCGCTATTGGTTGCTGCATTGAGTGCATGTACTGCAACTACCACCAACGT
TTCGTCACTTGAAACGACCACGCCACTTGCACTTGCAACCCCTACCCTGCCACCGGAAACTGCTACTCCGGTTGTTGCCG
CTACGACGACGGTTAGTACAACCACTGAGCTGCTGTTGCGTGCCCAGCCAATTGATTATTGTGAGTCTGGTGCGCCGACT
CGTGGCTGTGGCAAGCCCTTAGCGTTGCAAATTGCCGACTATCTTCAGCGCCATCCTGATGATCCCCAAGCACTGGCGTT
GTGGCGACGAATCATCAGCATTGGTCAGCCCACACAGGAAATCGGGGGGGACGATCCGCAGCAGATGGATACTACATGGG
CTTATGATGGCTGGACTGAGGCAGAATTTTTGGCGCTTGATTTACCCAGCAAGTTGACGGTAGGCCAACCAAGCTTAGAA
ATTGACCAACTCACAATTATGCCCACCAACTTGGATGGCGATGCAACCCAAGATTATCTGCTTTATGCGAGAATTTCTGG
TACGCATCCCAAGCTAGGCAAACTTCGTTGGATGCGTTGGCAGCATGGGCGTTGGGTTGGTGAGCAGATCTTGAGTTTCA
ACAATGATTCAGGGGCGCAGGTTGAACTTGGTGATGTTACTGGCGATGCTCAACCAGAGTTGCTGGTGCGCTCAAGCGGT
TGCGGCTCCGCTTGTTCTGGTCGGACGTATGGTTGGACTTGGCGTGATGGCGTGGCGTGGCAATTATTTCCCGACTGGGC
CGATACCGGCGATTTGAGCATAAGCCAAAATAGTCCGACCCTCAGCGTTAGTAGCCCTGATGCCAATTATCGCTTTGATG
GGCAGTATTTAAGCCCGGCTGAATTGGCGTTGCCAACAGGAACATACTCGCATACGATTGGCGCTCAGATGCGCCATGCC
CAAGGCTTGTTAGTGCTTGGCCGCTTTGATGAAGCCATTATGTGGCTCGAACGTGCTGCAAATCAGGCCGATGGTAGTGC
CTATTTTGGCTACAAAACCACATTCAAGGATGCGCGGCCTGTTGCGCTCTTTCGGATTGGCGCGATTCATCTACTCAATC
ACAATCCGCTGGCGGCACAGGCAGCATGGGCGCAAGTCATCCAGCGCTTTCCGCACTCGCTGGCAGCGGCAGCAGTGCAA
AAATTTAGTCTTTCTAGTTTTAATGGCTCGATTACTCAATGGTGTAGCCTGCTAGATACTGAACGTCCATTGATTATGGA
AGAATACCGACGCGCTTGGCTGGATGGGTTTTCGCTCAATGAGTTTGATTGGTTGCCACTTTGTCATCCACGGGTGCTTG
TTCCGCTGTATGAATGGACGCAAGCTACACCGCTTGAGCAACAATTTGCTAGCTTGGGCTTGCCTTGGCAGCAGCTTAGC
ACAGCCTACGATTTAAATGGCGATGGAGTGAATGACCCGCTGGGCGTGGTCGATTGGCTTGGGATATATACACCGTGGGC
AATGCTCTCGACCGAGGTTGGCTATCAGCCGCTCTATGTGTGA

Upstream 100 bases:

>100_bases
CTTTTCGATCATCTCATTGATCTATCACCTTTGCATCATTGTTGGGTAACGCATGAGTTACTACAGTGCAGCTAACCCCA
ATTAATGCTGCGGAGAGCTG

Downstream 100 bases:

>100_bases
CAGCCATGGAGTAGTGCCACAGATTTGGCAACCCTCACTGATTCTTATTTCCCATTTGACCAACCACAGATAGCCTCGAT
TACCGATCTTGATGCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVSTTTELLLRAQPIDYCESGAPT
RGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQEIGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLE
IDQLTIMPTNLDGDATQDYLLYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG
CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPAELALPTGTYSHTIGAQMRHA
QGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARPVALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQ
KFSLSSFNGSITQWCSLLDTERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS
TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV

Sequences:

>Translated_520_residues
MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVSTTTELLLRAQPIDYCESGAPT
RGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQEIGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLE
IDQLTIMPTNLDGDATQDYLLYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG
CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPAELALPTGTYSHTIGAQMRHA
QGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARPVALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQ
KFSLSSFNGSITQWCSLLDTERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS
TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV
>Mature_520_residues
MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVSTTTELLLRAQPIDYCESGAPT
RGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQEIGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLE
IDQLTIMPTNLDGDATQDYLLYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG
CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPAELALPTGTYSHTIGAQMRHA
QGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARPVALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQ
KFSLSSFNGSITQWCSLLDTERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS
TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57227; Mature: 57227

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVST
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHH
TTELLLRAQPIDYCESGAPTRGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQE
HHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
IGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLEIDQLTIMPTNLDGDATQDYL
HCCCCHHHCCCEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEE
LYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG
EEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEECCC
CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPA
CCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCCH
ELALPTGTYSHTIGAQMRHAQGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARP
HHCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEEECEECCCCCCCC
VALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQKFSLSSFNGSITQWCSLLDT
EEEEEECEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
ERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCHHHHHHHCCCCHHHHC
TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV
CEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVST
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHH
TTELLLRAQPIDYCESGAPTRGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQE
HHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
IGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLEIDQLTIMPTNLDGDATQDYL
HCCCCHHHCCCEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEE
LYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG
EEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEECCC
CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPA
CCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCCH
ELALPTGTYSHTIGAQMRHAQGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARP
HHCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEEECEECCCCCCCC
VALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQKFSLSSFNGSITQWCSLLDT
EEEEEECEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
ERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCHHHHHHHCCCCHHHHC
TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV
CEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA