| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898140
Identifier: 159898140
GI number: 159898140
Start: 1876549
End: 1877058
Strand: Direct
Name: 159898140
Synonym: Haur_1616
Alternate gene names: NA
Gene position: 1876549-1877058 (Clockwise)
Preceding gene: 159898139
Following gene: 159898141
Centisome position: 29.57
GC content: 47.65
Gene sequence:
>510_bases ATGAGCATGCTTGATCCTTATGAAATTGAGCGAATTGAGCGTTCGCGCAAACGGGCGACCCGCTTGTTGATGGTAGTAAT GAGCTTGGCAACCCTGTTTTGTGGGGCATTATTTATCTATATCATTAGCCCGCCGCCACGTGAATATAGTATTGGTCCAG TTAGCCAATTTCCAATTGGTCAAACGATTCAGGTTTCGGTTAAGCAACTGGTCGCCTCGAAAACCATCGTTAGTCGTCCT GAAGTTAGCGATGACCCCTTGTTGGTTACGCGCTTGAGCACCGATCAATGGCGCGTTTTCTTGGCTTGGGATAGTTTGAG CGGTTGTATTGTGCTCTATCAACAATCCGACCAAACATATCGTGATCAATGCTCAGATCGGGTGTATGATGAACGAGGAT TATTAATTAGCGAGAGTCGGCGGTTGCGCCTTGGTGAGTTGCCGGTCACCATTGTTGGCGATCAGGTCCAAATTCGTGAT GAACTTTTACCTGACCCCCGCCAAGAATAG
Upstream 100 bases:
>100_bases GTTGCGGCTTTGAGTTGCAGGCGGTCTATGGTTCGTATGAGCTTGACCCATATACCAGTGAATCGGAACGAATGTTGATT GTGGCACGAGGAATTTCCCA
Downstream 100 bases:
>100_bases CCTGACAATGGGCCTCATTGATTGTGGGGAAAAGGTTGAAGGTGTCCAGCTAGGTTTTATTGAGTAAAGGAGGGCATGTG TATCGCTTTGCGCGATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSMLDPYEIERIERSRKRATRLLMVVMSLATLFCGALFIYIISPPPREYSIGPVSQFPIGQTIQVSVKQLVASKTIVSRP EVSDDPLLVTRLSTDQWRVFLAWDSLSGCIVLYQQSDQTYRDQCSDRVYDERGLLISESRRLRLGELPVTIVGDQVQIRD ELLPDPRQE
Sequences:
>Translated_169_residues MSMLDPYEIERIERSRKRATRLLMVVMSLATLFCGALFIYIISPPPREYSIGPVSQFPIGQTIQVSVKQLVASKTIVSRP EVSDDPLLVTRLSTDQWRVFLAWDSLSGCIVLYQQSDQTYRDQCSDRVYDERGLLISESRRLRLGELPVTIVGDQVQIRD ELLPDPRQE >Mature_168_residues SMLDPYEIERIERSRKRATRLLMVVMSLATLFCGALFIYIISPPPREYSIGPVSQFPIGQTIQVSVKQLVASKTIVSRPE VSDDPLLVTRLSTDQWRVFLAWDSLSGCIVLYQQSDQTYRDQCSDRVYDERGLLISESRRLRLGELPVTIVGDQVQIRDE LLPDPRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19376; Mature: 19244
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLDPYEIERIERSRKRATRLLMVVMSLATLFCGALFIYIISPPPREYSIGPVSQFPIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCC QTIQVSVKQLVASKTIVSRPEVSDDPLLVTRLSTDQWRVFLAWDSLSGCIVLYQQSDQTY CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEECCCCHH RDQCSDRVYDERGLLISESRRLRLGELPVTIVGDQVQIRDELLPDPRQE HHHHHHHHHCCCCCEEECCCCEEECCCCEEEECCCEEEHHHHCCCCCCC >Mature Secondary Structure SMLDPYEIERIERSRKRATRLLMVVMSLATLFCGALFIYIISPPPREYSIGPVSQFPIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCC QTIQVSVKQLVASKTIVSRPEVSDDPLLVTRLSTDQWRVFLAWDSLSGCIVLYQQSDQTY CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEECCCCHH RDQCSDRVYDERGLLISESRRLRLGELPVTIVGDQVQIRDELLPDPRQE HHHHHHHHHCCCCCEEECCCCEEECCCCEEEECCCEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA