Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898141

Identifier: 159898141

GI number: 159898141

Start: 1877136

End: 1877708

Strand: Direct

Name: 159898141

Synonym: Haur_1617

Alternate gene names: NA

Gene position: 1877136-1877708 (Clockwise)

Preceding gene: 159898140

Following gene: 159898144

Centisome position: 29.58

GC content: 50.44

Gene sequence:

>573_bases
GTGTATCGCTTTGCGCGATCAGCCCCATTAGTGGTGGAAGAATTTGCTGATCCTGGGATCGATCACCGCGAGGGCGAACC
ATTAAGCTTAGGCAGCGCCTATTTAATGTTGGGGATGGTTGCTGCCGATGAATGCCCGCCAGAAATCCTGAATGTGCTCG
ATCAACTGAATCCCGAAAAATGGTATCATGGTCAGCTTTTTGAAACCATGATTAACTATTTTGAGGATCGTGATCCAGCC
TTGATGATGGAAATTGGTCGTGGCATTTATTATTCGCTAGCAGTTCAGTTTCGCGAGATGGGGCTGAATACCCCAACCTC
GATGTTGGTGGCCATGCCCGATGTTTGGCGTACAGCAACCCGTGGCTCAAGCGGCGAATGGCGCACAACGATTGTCGCGG
CCTATCATGCGCGGGTCGAAGTTCAACAACCGTACAATTGTATGTTTGAGCAGGCGGCGATGGAAGGGGTTTTGCAAGGT
TTAGGGGCACGTGATGTGCGAATCACTCACGAACCCTGTATGCGTGATGGCCATCCCTATTGTGTGTTTGATATTCGCTG
GACGGAACGTTAA

Upstream 100 bases:

>100_bases
TACCTGACCCCCGCCAAGAATAGCCTGACAATGGGCCTCATTGATTGTGGGGAAAAGGTTGAAGGTGTCCAGCTAGGTTT
TATTGAGTAAAGGAGGGCAT

Downstream 100 bases:

>100_bases
ACAAATGCCCTTGGTTGAGTCGTTTGATGCTTGCCTGTTGCGCGTTTGGCGTAACCACCTTGCTCGCTCCTCATCGAATT
GCTCAAACCAAGGATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MYRFARSAPLVVEEFADPGIDHREGEPLSLGSAYLMLGMVAADECPPEILNVLDQLNPEKWYHGQLFETMINYFEDRDPA
LMMEIGRGIYYSLAVQFREMGLNTPTSMLVAMPDVWRTATRGSSGEWRTTIVAAYHARVEVQQPYNCMFEQAAMEGVLQG
LGARDVRITHEPCMRDGHPYCVFDIRWTER

Sequences:

>Translated_190_residues
MYRFARSAPLVVEEFADPGIDHREGEPLSLGSAYLMLGMVAADECPPEILNVLDQLNPEKWYHGQLFETMINYFEDRDPA
LMMEIGRGIYYSLAVQFREMGLNTPTSMLVAMPDVWRTATRGSSGEWRTTIVAAYHARVEVQQPYNCMFEQAAMEGVLQG
LGARDVRITHEPCMRDGHPYCVFDIRWTER
>Mature_190_residues
MYRFARSAPLVVEEFADPGIDHREGEPLSLGSAYLMLGMVAADECPPEILNVLDQLNPEKWYHGQLFETMINYFEDRDPA
LMMEIGRGIYYSLAVQFREMGLNTPTSMLVAMPDVWRTATRGSSGEWRTTIVAAYHARVEVQQPYNCMFEQAAMEGVLQG
LGARDVRITHEPCMRDGHPYCVFDIRWTER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21731; Mature: 21731

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRFARSAPLVVEEFADPGIDHREGEPLSLGSAYLMLGMVAADECPPEILNVLDQLNPEK
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
WYHGQLFETMINYFEDRDPALMMEIGRGIYYSLAVQFREMGLNTPTSMLVAMPDVWRTAT
CHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHEEECCHHHHHHC
RGSSGEWRTTIVAAYHARVEVQQPYNCMFEQAAMEGVLQGLGARDVRITHEPCMRDGHPY
CCCCCCHHHEEEEEEEHEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCE
CVFDIRWTER
EEEEEEECCC
>Mature Secondary Structure
MYRFARSAPLVVEEFADPGIDHREGEPLSLGSAYLMLGMVAADECPPEILNVLDQLNPEK
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
WYHGQLFETMINYFEDRDPALMMEIGRGIYYSLAVQFREMGLNTPTSMLVAMPDVWRTAT
CHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCHHHEEECCHHHHHHC
RGSSGEWRTTIVAAYHARVEVQQPYNCMFEQAAMEGVLQGLGARDVRITHEPCMRDGHPY
CCCCCCHHHEEEEEEEHEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCE
CVFDIRWTER
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA