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The map label for this gene is dppC [H]

Identifier: 159898131

GI number: 159898131

Start: 1865631

End: 1866698

Strand: Direct

Name: dppC [H]

Synonym: Haur_1607

Alternate gene names: 159898131

Gene position: 1865631-1866698 (Clockwise)

Preceding gene: 159898130

Following gene: 159898133

Centisome position: 29.4

GC content: 50.75

Gene sequence:

>1068_bases
ATGGCGACAACAGAACCAACTATCACCAAGAAACCAACGAGCGATCAAGCGTTACTTTCGCGCAAGCCGCGTTCGCTCTG
GAGTGATGCTCGGCGGCGGCTGTTTAGTAGCACGGTTGGCCGTTTGGGAATGCTGATTTGTGCTTTTCTGTTTGCAGTTG
CAATTATCACGCCCTTGGTACAACCGCTTGATCAGACGCTCAACCGTGATACCGCCAACAAACTCCAACCGCCATCATGG
TTGATGACCGCCGAAGAACGGGCCGATGCTGCTAGCAAAAGCATCGACAAAGCCCGCAAAGATATTCCGTGGGGCAGATT
TGAACGGCCATTCGGCACCGATCAATTAGGTCGCGATATCTTTATTCGGGTGTTGCATGGTGCGCCGATTTCGCTAACGG
TGGGCACATTTGCGGTGATATTGGCGGTAATTTTTGGCTCGTTGCTAGGCTTAATTTCGGGCTTTTTCGGCGGCATTATT
GACACCATTGCCACCTGGCTGATGGACATTTTGCTGGCGTTTCCCTCAATTCTCCTCGCGATTGCTTTGACCGCGATTAG
CAATAACCGTGAATCGTTTTCGTATAAATTTAGCCAACAAATTACCGAACTGCCAATTTTGCAAACGATTTTTGACCCAC
CGTTGTTCAATGCAATGTTGGCGGTAGCAGTCGTCGAAATTCCAATTTTTGGGCGGATTGCCCGTGCAGCGGTGTTGAGT
GTGCGCAATCAAGAGTATATTCATGCTGCCGAGGCGGTTGGGGTGAGCCGAATGCGTATGTTGATGCGGCATATTTTGCC
CAATAGCTTAACCCCAATTTTGGTGCAAATGACCTTGAGTGTGGCCTCATCGATTACTAGTGTAGCAGCCTTGGGATTTT
TGGGGCTGGGCGCACAACCACCACGGCCTGAATGGGGTTCGATGCTTTCGACCGCCCGTGAATATGTGGGCACTGGCCAA
TGGTGGTATGCCTTGTTTCCCGGGATTGCGATTATGCTGACTGTGTTGGGTTTTAATTTGCTTGGCGATGGTTTGCGCGA
TGCCCTCGATCCGCGGCTGAAGCATTAA

Upstream 100 bases:

>100_bases
TACCTTGGTCGATATTTCCTACCGCTTCTTTGATCCCCGAATTCAATATAAGTAACGCTGCTCGGCGTTTGTGGATGCAA
CTTGTTTGTAAAGGTTGATT

Downstream 100 bases:

>100_bases
TGAGCAAATCGACTAACGATTGGTTCATATCCTTGCATCTACGCAGGCATCCTAAACTATCAGACCGCACCTAACCCTAT
AAGCGGTATTAAGTGATTAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MATTEPTITKKPTSDQALLSRKPRSLWSDARRRLFSSTVGRLGMLICAFLFAVAIITPLVQPLDQTLNRDTANKLQPPSW
LMTAEERADAASKSIDKARKDIPWGRFERPFGTDQLGRDIFIRVLHGAPISLTVGTFAVILAVIFGSLLGLISGFFGGII
DTIATWLMDILLAFPSILLAIALTAISNNRESFSYKFSQQITELPILQTIFDPPLFNAMLAVAVVEIPIFGRIARAAVLS
VRNQEYIHAAEAVGVSRMRMLMRHILPNSLTPILVQMTLSVASSITSVAALGFLGLGAQPPRPEWGSMLSTAREYVGTGQ
WWYALFPGIAIMLTVLGFNLLGDGLRDALDPRLKH

Sequences:

>Translated_355_residues
MATTEPTITKKPTSDQALLSRKPRSLWSDARRRLFSSTVGRLGMLICAFLFAVAIITPLVQPLDQTLNRDTANKLQPPSW
LMTAEERADAASKSIDKARKDIPWGRFERPFGTDQLGRDIFIRVLHGAPISLTVGTFAVILAVIFGSLLGLISGFFGGII
DTIATWLMDILLAFPSILLAIALTAISNNRESFSYKFSQQITELPILQTIFDPPLFNAMLAVAVVEIPIFGRIARAAVLS
VRNQEYIHAAEAVGVSRMRMLMRHILPNSLTPILVQMTLSVASSITSVAALGFLGLGAQPPRPEWGSMLSTAREYVGTGQ
WWYALFPGIAIMLTVLGFNLLGDGLRDALDPRLKH
>Mature_354_residues
ATTEPTITKKPTSDQALLSRKPRSLWSDARRRLFSSTVGRLGMLICAFLFAVAIITPLVQPLDQTLNRDTANKLQPPSWL
MTAEERADAASKSIDKARKDIPWGRFERPFGTDQLGRDIFIRVLHGAPISLTVGTFAVILAVIFGSLLGLISGFFGGIID
TIATWLMDILLAFPSILLAIALTAISNNRESFSYKFSQQITELPILQTIFDPPLFNAMLAVAVVEIPIFGRIARAAVLSV
RNQEYIHAAEAVGVSRMRMLMRHILPNSLTPILVQMTLSVASSITSVAALGFLGLGAQPPRPEWGSMLSTAREYVGTGQW
WYALFPGIAIMLTVLGFNLLGDGLRDALDPRLKH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=242, Percent_Identity=46.6942148760331, Blast_Score=211, Evalue=4e-56,
Organism=Escherichia coli, GI1787054, Length=346, Percent_Identity=37.8612716763006, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789964, Length=251, Percent_Identity=43.0278884462151, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1787549, Length=338, Percent_Identity=31.9526627218935, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1787498, Length=352, Percent_Identity=31.8181818181818, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=30.0813008130081, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1788505, Length=280, Percent_Identity=27.8571428571429, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38901; Mature: 38770

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTEPTITKKPTSDQALLSRKPRSLWSDARRRLFSSTVGRLGMLICAFLFAVAIITPLV
CCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPLDQTLNRDTANKLQPPSWLMTAEERADAASKSIDKARKDIPWGRFERPFGTDQLGRDI
HHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
FIRVLHGAPISLTVGTFAVILAVIFGSLLGLISGFFGGIIDTIATWLMDILLAFPSILLA
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALTAISNNRESFSYKFSQQITELPILQTIFDPPLFNAMLAVAVVEIPIFGRIARAAVLS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNQEYIHAAEAVGVSRMRMLMRHILPNSLTPILVQMTLSVASSITSVAALGFLGLGAQP
HHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRPEWGSMLSTAREYVGTGQWWYALFPGIAIMLTVLGFNLLGDGLRDALDPRLKH
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATTEPTITKKPTSDQALLSRKPRSLWSDARRRLFSSTVGRLGMLICAFLFAVAIITPLV
CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]