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The map label for this gene is 159898079

Identifier: 159898079

GI number: 159898079

Start: 1805896

End: 1806729

Strand: Direct

Name: 159898079

Synonym: Haur_1555

Alternate gene names: NA

Gene position: 1805896-1806729 (Clockwise)

Preceding gene: 159898078

Following gene: 159898080

Centisome position: 28.45

GC content: 50.72

Gene sequence:

>834_bases
ATGATCAATTACATCGATTTGCATGCGCACATGGTTTCGCGCACTACCGACGATTATCATGCCATGGCCTTGACTGGCTG
TGTTGCGGTGACTGAGCCAGCCTTTTGGGCGGGTTATGATCGGGTTGCGGCCAGCGCTTTTGCCGATTATTTTAAACATT
TGACTGAGTTTGAACCCCAACGCGCCGCTAAATATGGCATTAAGCATTACACATGGCTCTGTTTAAACCCCAAAGAAGGC
GAAGATCGGGGGTTGGCTCGCGAAGTTTTGGCAATTATTCCGCAATTTTTAGATCGCCCAAGCGTGCTTGGCATTGGCGA
AATTGGCCTCAACCGCGTGACCCGCAATGAACTTGCCACCTTTATTGATCATGTGGAATTAGCGCTTGAACACAACCAAT
TAATCCATATTCACACCCCACACCTTGAAGATAAATATAAAGGCACCAAGGCGATTGTCGAAACGTTGGCTAGCAACAGC
CGAATCGATCCCAGCCGCGTGATGGTTGACCATGTTGAGGAACACACAATTCGCATGGTGCTTGAGCATGGGTTTTGGGC
GGGCTTGACGCTCTATCCAATGACCAAAGTTTCGCCAGGCCGGGCGATTGATATGCTCGAAATCTATGGCACTGAGCGCT
TATGTGTCGCTTCGGCCTGCGATTGGGGGCCAAGTCAGCCGCTGGCCATCCCCAATTGTATGTTTGAAATGCGCCGCCGT
GGCCATTCCAACCAATGGATTCACGAGGTGGTCTATAACAATCCTTGCCGCTTCCTGAGCCAAAGCCCCAAATTTAAGTT
TGCGCCGCTTGAGCAGCCTGCGCTTGTGCACTAG

Upstream 100 bases:

>100_bases
GAGTTGAACGGATTCAAATGTTGTTGAGCGATGTGAGCAGCGAATTACGCGCCGAGCGCGATGGCCAAAGTGCCTATGGT
GCTGCCAAGGAGAGCGAGCA

Downstream 100 bases:

>100_bases
AAATGGAAGCATATGCAGCTTAATCAAGCGCCCCAACTCGATTTAACCTATTGCACCAATATTCATCCGGCCAACGGCTG
GCCAGCGGTTTTAGCTGGTT

Product: TatD-related deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MINYIDLHAHMVSRTTDDYHAMALTGCVAVTEPAFWAGYDRVAASAFADYFKHLTEFEPQRAAKYGIKHYTWLCLNPKEG
EDRGLAREVLAIIPQFLDRPSVLGIGEIGLNRVTRNELATFIDHVELALEHNQLIHIHTPHLEDKYKGTKAIVETLASNS
RIDPSRVMVDHVEEHTIRMVLEHGFWAGLTLYPMTKVSPGRAIDMLEIYGTERLCVASACDWGPSQPLAIPNCMFEMRRR
GHSNQWIHEVVYNNPCRFLSQSPKFKFAPLEQPALVH

Sequences:

>Translated_277_residues
MINYIDLHAHMVSRTTDDYHAMALTGCVAVTEPAFWAGYDRVAASAFADYFKHLTEFEPQRAAKYGIKHYTWLCLNPKEG
EDRGLAREVLAIIPQFLDRPSVLGIGEIGLNRVTRNELATFIDHVELALEHNQLIHIHTPHLEDKYKGTKAIVETLASNS
RIDPSRVMVDHVEEHTIRMVLEHGFWAGLTLYPMTKVSPGRAIDMLEIYGTERLCVASACDWGPSQPLAIPNCMFEMRRR
GHSNQWIHEVVYNNPCRFLSQSPKFKFAPLEQPALVH
>Mature_277_residues
MINYIDLHAHMVSRTTDDYHAMALTGCVAVTEPAFWAGYDRVAASAFADYFKHLTEFEPQRAAKYGIKHYTWLCLNPKEG
EDRGLAREVLAIIPQFLDRPSVLGIGEIGLNRVTRNELATFIDHVELALEHNQLIHIHTPHLEDKYKGTKAIVETLASNS
RIDPSRVMVDHVEEHTIRMVLEHGFWAGLTLYPMTKVSPGRAIDMLEIYGTERLCVASACDWGPSQPLAIPNCMFEMRRR
GHSNQWIHEVVYNNPCRFLSQSPKFKFAPLEQPALVH

Specific function: Unknown

COG id: COG1099

COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0761 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR012022 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: NA

Molecular weight: Translated: 31533; Mature: 31533

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYIDLHAHMVSRTTDDYHAMALTGCVAVTEPAFWAGYDRVAASAFADYFKHLTEFEPQ
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHH
RAAKYGIKHYTWLCLNPKEGEDRGLAREVLAIIPQFLDRPSVLGIGEIGLNRVTRNELAT
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH
FIDHVELALEHNQLIHIHTPHLEDKYKGTKAIVETLASNSRIDPSRVMVDHVEEHTIRMV
HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LEHGFWAGLTLYPMTKVSPGRAIDMLEIYGTERLCVASACDWGPSQPLAIPNCMFEMRRR
HHCCCCCCEEEEECCCCCCCCCEEHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHC
GHSNQWIHEVVYNNPCRFLSQSPKFKFAPLEQPALVH
CCCCHHHHHHHHCCCHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MINYIDLHAHMVSRTTDDYHAMALTGCVAVTEPAFWAGYDRVAASAFADYFKHLTEFEPQ
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHH
RAAKYGIKHYTWLCLNPKEGEDRGLAREVLAIIPQFLDRPSVLGIGEIGLNRVTRNELAT
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH
FIDHVELALEHNQLIHIHTPHLEDKYKGTKAIVETLASNSRIDPSRVMVDHVEEHTIRMV
HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LEHGFWAGLTLYPMTKVSPGRAIDMLEIYGTERLCVASACDWGPSQPLAIPNCMFEMRRR
HHCCCCCCEEEEECCCCCCCCCEEHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHC
GHSNQWIHEVVYNNPCRFLSQSPKFKFAPLEQPALVH
CCCCHHHHHHHHCCCHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]