Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898080

Identifier: 159898080

GI number: 159898080

Start: 1806742

End: 1807965

Strand: Direct

Name: 159898080

Synonym: Haur_1556

Alternate gene names: NA

Gene position: 1806742-1807965 (Clockwise)

Preceding gene: 159898079

Following gene: 159898081

Centisome position: 28.47

GC content: 51.47

Gene sequence:

>1224_bases
ATGCAGCTTAATCAAGCGCCCCAACTCGATTTAACCTATTGCACCAATATTCATCCGGCCAACGGCTGGCCAGCGGTTTT
AGCTGGTTTGCAACAGCATGTGCTCGATCTCAAACAGCGCCTCGCTCCCAACCAAGCCTTTGGGATTGGCCTGCGGCTTT
CGGGCCAAGAAAGCCACCAATTGTTGGAGCCAACTGCGCTTGCTGATTTTCAAGCATGGCTAACTGAACATAATCTTTAT
GTCTTTACCTTGAATGGCTTTCCCTACCATCCCTTCCACCAACAACCAGTCAAGGATCAGGTGCATGCGCCCGATTGGCG
TGAGCCTGAACGAGTGGCCTATACCTTACGGCTGATTGAGATCTTGGCGGCACTGTTGCCCAAGGGCATGGTTGGCTCAA
TTTCGACCAGCCCTTTGAGCTATAAACCATGGTTTGCCGATTTGTCCGCCGTGCCGTGGGCATTGTTGAATCGCCATGTG
TTGCAGGTGGTCGCCGCGTTGGTCCAGCTTGAGCGCCAACGTGGGATTGTGATTCAATTAGCTTTCGAGCCAGAGCCAGA
TGGTTTGCTCGAAACCAGCAGTGAATTAATCGGCTATGTTGAGCAATTGTTGGATGTTGGCGCTGTTGAATTAGCAGCTC
AACTTGATTGCTCGTTGCGCGAAGCCCAAAATGCGATTCGTCGCCATGTCGGAGCCTGTTTGGATACCTGTCATTGCGCC
GTAGCCTACGAAGCGCCGCGCCACGTGATCGCTGCTTATCAAACGGCAGGCATCAGCATTGCCAAAGTGCAACTTAGCTC
AGCCTTGCAAGTGATGCTTGATGACGATCGCCAGGCCGTAGCAGCAGCTTTAGCACCATTCAGCGAAGCAATTTATTTGC
ACCAAGTGATTCAGCGCAACCATGATGGTTCGTTGCAGCAATATCGCGATTTGCCTCAAGCCTTGGAAAAGATCGATGAT
CCTGCTGCTTGCGAATGGCGGATTCATTTTCATGTACCGATTTTTACCGCCAGTTTTGGCCTGCTCAACGCCACCCAACC
AGCCTTGCTCGAAAGTTTGCAAGCCTTGCTCGAAAGTTTGCAAGCCTTGAACGAGCAGCCCTACAGCCAGCATTTGGAGA
TTGAAACCTATACGTGGGATGTGCTGCCAAGCCAATTAAAGCTCGATCTGACTGAATCGATCGCGCGGGAGTATGCGTGG
GTGTTGCATGAACTCAAACGCTAA

Upstream 100 bases:

>100_bases
GGTGGTCTATAACAATCCTTGCCGCTTCCTGAGCCAAAGCCCCAAATTTAAGTTTGCGCCGCTTGAGCAGCCTGCGCTTG
TGCACTAGAAATGGAAGCAT

Downstream 100 bases:

>100_bases
ATCTGACTGGTTGGCCTATCTCGAACTGATGCGCATCTCCAATAATCCGACCGTGATCAGCAATACATTGGCTGGCGTGG
CTTTGGCGGGAGTCAGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MQLNQAPQLDLTYCTNIHPANGWPAVLAGLQQHVLDLKQRLAPNQAFGIGLRLSGQESHQLLEPTALADFQAWLTEHNLY
VFTLNGFPYHPFHQQPVKDQVHAPDWREPERVAYTLRLIEILAALLPKGMVGSISTSPLSYKPWFADLSAVPWALLNRHV
LQVVAALVQLERQRGIVIQLAFEPEPDGLLETSSELIGYVEQLLDVGAVELAAQLDCSLREAQNAIRRHVGACLDTCHCA
VAYEAPRHVIAAYQTAGISIAKVQLSSALQVMLDDDRQAVAAALAPFSEAIYLHQVIQRNHDGSLQQYRDLPQALEKIDD
PAACEWRIHFHVPIFTASFGLLNATQPALLESLQALLESLQALNEQPYSQHLEIETYTWDVLPSQLKLDLTESIAREYAW
VLHELKR

Sequences:

>Translated_407_residues
MQLNQAPQLDLTYCTNIHPANGWPAVLAGLQQHVLDLKQRLAPNQAFGIGLRLSGQESHQLLEPTALADFQAWLTEHNLY
VFTLNGFPYHPFHQQPVKDQVHAPDWREPERVAYTLRLIEILAALLPKGMVGSISTSPLSYKPWFADLSAVPWALLNRHV
LQVVAALVQLERQRGIVIQLAFEPEPDGLLETSSELIGYVEQLLDVGAVELAAQLDCSLREAQNAIRRHVGACLDTCHCA
VAYEAPRHVIAAYQTAGISIAKVQLSSALQVMLDDDRQAVAAALAPFSEAIYLHQVIQRNHDGSLQQYRDLPQALEKIDD
PAACEWRIHFHVPIFTASFGLLNATQPALLESLQALLESLQALNEQPYSQHLEIETYTWDVLPSQLKLDLTESIAREYAW
VLHELKR
>Mature_407_residues
MQLNQAPQLDLTYCTNIHPANGWPAVLAGLQQHVLDLKQRLAPNQAFGIGLRLSGQESHQLLEPTALADFQAWLTEHNLY
VFTLNGFPYHPFHQQPVKDQVHAPDWREPERVAYTLRLIEILAALLPKGMVGSISTSPLSYKPWFADLSAVPWALLNRHV
LQVVAALVQLERQRGIVIQLAFEPEPDGLLETSSELIGYVEQLLDVGAVELAAQLDCSLREAQNAIRRHVGACLDTCHCA
VAYEAPRHVIAAYQTAGISIAKVQLSSALQVMLDDDRQAVAAALAPFSEAIYLHQVIQRNHDGSLQQYRDLPQALEKIDD
PAACEWRIHFHVPIFTASFGLLNATQPALLESLQALLESLQALNEQPYSQHLEIETYTWDVLPSQLKLDLTESIAREYAW
VLHELKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45527; Mature: 45527

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNQAPQLDLTYCTNIHPANGWPAVLAGLQQHVLDLKQRLAPNQAFGIGLRLSGQESHQ
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHH
LLEPTALADFQAWLTEHNLYVFTLNGFPYHPFHQQPVKDQVHAPDWREPERVAYTLRLIE
HHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ILAALLPKGMVGSISTSPLSYKPWFADLSAVPWALLNRHVLQVVAALVQLERQRGIVIQL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AFEPEPDGLLETSSELIGYVEQLLDVGAVELAAQLDCSLREAQNAIRRHVGACLDTCHCA
EECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VAYEAPRHVIAAYQTAGISIAKVQLSSALQVMLDDDRQAVAAALAPFSEAIYLHQVIQRN
EEECCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
HDGSLQQYRDLPQALEKIDDPAACEWRIHFHVPIFTASFGLLNATQPALLESLQALLESL
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHH
QALNEQPYSQHLEIETYTWDVLPSQLKLDLTESIAREYAWVLHELKR
HHHCCCCCHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLNQAPQLDLTYCTNIHPANGWPAVLAGLQQHVLDLKQRLAPNQAFGIGLRLSGQESHQ
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHH
LLEPTALADFQAWLTEHNLYVFTLNGFPYHPFHQQPVKDQVHAPDWREPERVAYTLRLIE
HHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ILAALLPKGMVGSISTSPLSYKPWFADLSAVPWALLNRHVLQVVAALVQLERQRGIVIQL
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AFEPEPDGLLETSSELIGYVEQLLDVGAVELAAQLDCSLREAQNAIRRHVGACLDTCHCA
EECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
VAYEAPRHVIAAYQTAGISIAKVQLSSALQVMLDDDRQAVAAALAPFSEAIYLHQVIQRN
EEECCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
HDGSLQQYRDLPQALEKIDDPAACEWRIHFHVPIFTASFGLLNATQPALLESLQALLESL
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHH
QALNEQPYSQHLEIETYTWDVLPSQLKLDLTESIAREYAWVLHELKR
HHHCCCCCHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA