| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898066
Identifier: 159898066
GI number: 159898066
Start: 1797793
End: 1798023
Strand: Direct
Name: 159898066
Synonym: Haur_1542
Alternate gene names: NA
Gene position: 1797793-1798023 (Clockwise)
Preceding gene: 159898065
Following gene: 159898067
Centisome position: 28.33
GC content: 45.02
Gene sequence:
>231_bases ATGAAACAACGCTTTCCACGCCATCAAAAAATGACCATCGTCCATGGCATTTTAAGTATTGTGCTGATCATCGATATTGT GCAGCTTTGGTTGTTGATCGCCACCATGAACTCGTATCTTGGTGGCGATAGCGGTGTGCCACTGCCAGCCTTAATCTTTA GCTGCATCTGTTTATTGCTCAACCTTGGCTTGCTGAGATTTCTCTACAAGCTTGATCGAACTGCCAACTGA
Upstream 100 bases:
>100_bases GCCGACCATTAGCGGGGCCGCCCCAACACCCATTGCCACGCATTCATGTTGAGGTGCAAGGCGATGAGGTGTTTGCAACC TCGGTGGAGTTACGCAGCAT
Downstream 100 bases:
>100_bases TTTAGGAGCCTTGCAATGACTGCTCAAGCAACGGCCAATGACGGCCAAGCCCGTGGCAATTTGGGCCAATTAATCCTCGC AACCGGGGCATTTGCTGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKQRFPRHQKMTIVHGILSIVLIIDIVQLWLLIATMNSYLGGDSGVPLPALIFSCICLLLNLGLLRFLYKLDRTAN
Sequences:
>Translated_76_residues MKQRFPRHQKMTIVHGILSIVLIIDIVQLWLLIATMNSYLGGDSGVPLPALIFSCICLLLNLGLLRFLYKLDRTAN >Mature_76_residues MKQRFPRHQKMTIVHGILSIVLIIDIVQLWLLIATMNSYLGGDSGVPLPALIFSCICLLLNLGLLRFLYKLDRTAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8595; Mature: 8595
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRFPRHQKMTIVHGILSIVLIIDIVQLWLLIATMNSYLGGDSGVPLPALIFSCICLLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH NLGLLRFLYKLDRTAN HHHHHHHHHHHHHCCC >Mature Secondary Structure MKQRFPRHQKMTIVHGILSIVLIIDIVQLWLLIATMNSYLGGDSGVPLPALIFSCICLLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH NLGLLRFLYKLDRTAN HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA