| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898065
Identifier: 159898065
GI number: 159898065
Start: 1797389
End: 1797796
Strand: Direct
Name: 159898065
Synonym: Haur_1541
Alternate gene names: NA
Gene position: 1797389-1797796 (Clockwise)
Preceding gene: 159898064
Following gene: 159898066
Centisome position: 28.32
GC content: 50.98
Gene sequence:
>408_bases GTGTTGATTAGCTCGGCGTTTAGTGCGGGCCAATTTTGGATTTTGTTTAAAAATTGGCAGCGCAACCAAGCCGCCGCGCC GCCAGCCCAAAAAATCGCTAATTTAGCTGATATTCCAGTTGGTGGAATGCTGCTGTTTCGTTACCCCAACGAGCATGAGC CATGCATTTTGGTGCGGCCTGATGAGAATACCTTGGTTGCCTATAGCCAAAAATGCACCCACCTTTCATGTGCAGTGATT CCCAACGTCGCCGAAAATAAAATCGTTTGCCCATGCCACCAAGGCTACTTCAGCTTGGATGAAGGCCGACCATTAGCGGG GCCGCCCCAACACCCATTGCCACGCATTCATGTTGAGGTGCAAGGCGATGAGGTGTTTGCAACCTCGGTGGAGTTACGCA GCATATGA
Upstream 100 bases:
>100_bases TGGCCTGCCATTGTGCCAACAACCATAATGGCGGCAAGATTTCCCAATCGATGTTGCTCGAGATAACTATGTTTCACGCC GTGAATTTGCCAAATTTTTG
Downstream 100 bases:
>100_bases AACAACGCTTTCCACGCCATCAAAAAATGACCATCGTCCATGGCATTTTAAGTATTGTGCTGATCATCGATATTGTGCAG CTTTGGTTGTTGATCGCCAC
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Domain-Containing Protein; Rieske Domain Protein; Rieske Iron-Sulfur Protein; Twin-Arginine Translocation Pathway Signal; Rieske Iron Sulphur Protein; Rieske Iron-Sulfur Domain Protein; Rieske Iron-Sulfur Domain
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRPDENTLVAYSQKCTHLSCAVI PNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEVQGDEVFATSVELRSI
Sequences:
>Translated_135_residues MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRPDENTLVAYSQKCTHLSCAVI PNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEVQGDEVFATSVELRSI >Mature_135_residues MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRPDENTLVAYSQKCTHLSCAVI PNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEVQGDEVFATSVELRSI
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14947; Mature: 14947
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00200 RIESKE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRP CEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEC DENTLVAYSQKCTHLSCAVIPNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEV CCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEE QGDEVFATSVELRSI ECCEEEEEEEEEECC >Mature Secondary Structure MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRP CEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEC DENTLVAYSQKCTHLSCAVIPNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEV CCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEE QGDEVFATSVELRSI ECCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA