Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898062

Identifier: 159898062

GI number: 159898062

Start: 1793904

End: 1794680

Strand: Direct

Name: 159898062

Synonym: Haur_1537

Alternate gene names: NA

Gene position: 1793904-1794680 (Clockwise)

Preceding gene: 159898060

Following gene: 159898063

Centisome position: 28.27

GC content: 53.54

Gene sequence:

>777_bases
ATGATTACCGCTACTATGACGGTCGCTGACATTCTCAAGCGTTATCCCAATTTGCTTGAGGTTTTTGTGGCTCAACATCA
GGCCTTTCAACGGCTGCGCAATCCGCTGTTGCGGCGGGTATTTGCCCGCATGGTTACGCTTGAACAGGCCGCCCAAATTG
CTCAAATTGAGCCAGCCAGTTTAGTGCAAGCGCTGAATCAGGCCAATGGCAAACCCGTTGCGGTTACGCCGCCGATTGAG
CCTTCTAGCCCACAGCTTGATCCAGCGATTCCACCAGCTTGGCTGCAATTCAGCCAGATCAGCTATTTACTCGATGTACG
TGAAGCCCAAGCAACCGCCCAAAATCCCTTGGCGCTGATTACTCCCGCCACGCTAGCGCTTGCCGACGATCAACTGTTGC
TTTTACGCAGCAGCTTTGAGCCAGTGCCGTTGTATCAGTGGCTCGCTCGGCGCGGCTACCAAGCTTGGGCGCACCAACAT
ACCAGCGACGATTGGTTGGTGTTGATCGGACGATTTGCCACTACTGAAACTCAGCCAAGCGACCAGCCCAACCCCGCCAA
GCCATGTGTGGTTTTGGATAATCGCGGCCTCAAGCCACCCGAACCGATGGTGCGCACGATTACAACGCTCAAAAAGTTGC
CGCCTGTGAGCTATTTAATCGGCGTTACCGACCGAATTCCGGTGATTTTGCATGAAACGCTGAGCGACGAAGGCTACCCA
TTTGAATCATTAGGCCAGATTCAACAAAGCTATCTGACCCTGATCACTGCTGGGTAA

Upstream 100 bases:

>100_bases
TGACTTTTCTCACATGGCTTGGTTGTGAGAAAAGTCGCTGCTCAATCGACCTGCTGGCGCTAGACTCGGCATAGTGAGCT
ATTAGCGCAACGAGGTATCC

Downstream 100 bases:

>100_bases
GGAGTTTTCAACCGCAGGTATTTAGATGATTACATTGTTGTGAGTTGCTAGCGAATATCCTATTTGCTATTCCCCTCCAT
GTGCCAAGTGAAAACAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MITATMTVADILKRYPNLLEVFVAQHQAFQRLRNPLLRRVFARMVTLEQAAQIAQIEPASLVQALNQANGKPVAVTPPIE
PSSPQLDPAIPPAWLQFSQISYLLDVREAQATAQNPLALITPATLALADDQLLLLRSSFEPVPLYQWLARRGYQAWAHQH
TSDDWLVLIGRFATTETQPSDQPNPAKPCVVLDNRGLKPPEPMVRTITTLKKLPPVSYLIGVTDRIPVILHETLSDEGYP
FESLGQIQQSYLTLITAG

Sequences:

>Translated_258_residues
MITATMTVADILKRYPNLLEVFVAQHQAFQRLRNPLLRRVFARMVTLEQAAQIAQIEPASLVQALNQANGKPVAVTPPIE
PSSPQLDPAIPPAWLQFSQISYLLDVREAQATAQNPLALITPATLALADDQLLLLRSSFEPVPLYQWLARRGYQAWAHQH
TSDDWLVLIGRFATTETQPSDQPNPAKPCVVLDNRGLKPPEPMVRTITTLKKLPPVSYLIGVTDRIPVILHETLSDEGYP
FESLGQIQQSYLTLITAG
>Mature_258_residues
MITATMTVADILKRYPNLLEVFVAQHQAFQRLRNPLLRRVFARMVTLEQAAQIAQIEPASLVQALNQANGKPVAVTPPIE
PSSPQLDPAIPPAWLQFSQISYLLDVREAQATAQNPLALITPATLALADDQLLLLRSSFEPVPLYQWLARRGYQAWAHQH
TSDDWLVLIGRFATTETQPSDQPNPAKPCVVLDNRGLKPPEPMVRTITTLKKLPPVSYLIGVTDRIPVILHETLSDEGYP
FESLGQIQQSYLTLITAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28668; Mature: 28668

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITATMTVADILKRYPNLLEVFVAQHQAFQRLRNPLLRRVFARMVTLEQAAQIAQIEPAS
CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LVQALNQANGKPVAVTPPIEPSSPQLDPAIPPAWLQFSQISYLLDVREAQATAQNPLALI
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TPATLALADDQLLLLRSSFEPVPLYQWLARRGYQAWAHQHTSDDWLVLIGRFATTETQPS
CCCHHEECCCCEEEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCEEEEEEHHHCCCCCCC
DQPNPAKPCVVLDNRGLKPPEPMVRTITTLKKLPPVSYLIGVTDRIPVILHETLSDEGYP
CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCC
FESLGQIQQSYLTLITAG
HHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MITATMTVADILKRYPNLLEVFVAQHQAFQRLRNPLLRRVFARMVTLEQAAQIAQIEPAS
CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LVQALNQANGKPVAVTPPIEPSSPQLDPAIPPAWLQFSQISYLLDVREAQATAQNPLALI
HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TPATLALADDQLLLLRSSFEPVPLYQWLARRGYQAWAHQHTSDDWLVLIGRFATTETQPS
CCCHHEECCCCEEEECCCCCCCHHHHHHHHCCHHHHHHCCCCCCEEEEEEHHHCCCCCCC
DQPNPAKPCVVLDNRGLKPPEPMVRTITTLKKLPPVSYLIGVTDRIPVILHETLSDEGYP
CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCC
FESLGQIQQSYLTLITAG
HHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA