| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898060
Identifier: 159898060
GI number: 159898060
Start: 1790297
End: 1792327
Strand: Direct
Name: 159898060
Synonym: Haur_1535
Alternate gene names: NA
Gene position: 1790297-1792327 (Clockwise)
Preceding gene: 159898056
Following gene: 159898062
Centisome position: 28.21
GC content: 51.9
Gene sequence:
>2031_bases ATGTCCACACCACACGCCCAAGTTTATTTCAACCGCTACAATCTTTTTAACACTACGCCCAACCCAGCCCCAAGCGGCAA TACCGATTGGTACACCAACCAACCAATTATGCAACTGAGCAACCCGCAATTGACTCAACGCGTGCCAAGCCAAACAGCGT TGCTGACCAATTGGTCGTTGCCAAATGCCAATTTGCTCGGGCTGCAAGACCTCAATTGGGCTTTTTGTGTTTATGATCTT CAACAACAATTAGCTACGAGCGCCAATGCCGATGATTTGCCGAATGCGCCGCTAGCTTATGCCCAAGTCCAAGCAACTCA CAATACCACCCAAAGCACGATTGCAACCAAAGTTTGTTTATTTAATGTGTTGGTGGCGATCGAATGGGTGCCGAGTGCTA TCGAACTCAATCAATTGCAATGGGCTTTTCGGCGAGCTTCAGATTTCTTGTTCGACGTGAGCAACGGCACGATGGCTTTT GGTCAGGTGGTTTTTGGTGGTGTGCAGCATATGCGAGCTGCCGATATTCAAATTCTGGCCTCAAACCGCTATCACCCTCG CAGTTGGCGCGAAGGCCTCTACACCGATGCCAAGCATATGCCGATTCGCCTGGGGCGTGGTATGTGGGAGCGCCAAGGCA GCTTTAGTATTCCTTGGCACGAGCCAGAAGGCTATCGCGTGATTGTGCACGAATGGATGCACTACGCCATTGGTTTGCGC GATCAATATATCAATTCAAATAATGCTGAGCACCCAGATTTGGCGCTGCCTTCATTCAACCCAACGGCTGAGTCGATTAT GGCCCACTTGGTTGGTTCGAGCGAAGTCATGCGGATCGAGGGTGGCGATGATGTTTGGCAGCCATTCCGTGCCCAAACTG GCGCTGGTTTGCCCTATAGCGCCATGGCAACTGCCCCATTTGATCAGCCACGAGTTGGCCCCGAACGTCTGCCCTTGCCA TTGCCCTTGTTTCAGCATAGTTTTGGCAGCAATCCAACTGCTGAAGTGATCAACTTACCAATTGCTGAAACCCCGTTGGC TGGCCTCAAACATGGTTGGGTGTATGTGTTGCGTGGCAGCCTGAACGATCCTAGCACGATTATTCCCCAGGGTAGCCTTG ATTCGCGGGTGAATTCGCAGGGCTTCAAGTTGCTGGGCGCAAATTCCGATGATTATGTGGTGGTAATTGGCGATCAAGCG AATGGTTCCACGGCGGTCTATGTCGCGCAGCTTGAGGGTAATCCACCTGAATGTAACTGGCTTGAATGCACGCCCAGCCA ATTTCCGCTGGTGGCGGTGATGCCCTATGGCTCAGTAACTCAAGGCTCGTATAGCGTCAAAGTTGTAACTGAATCGGGCC TAACTCCAACGGCGATTTATGTTGCCGCTGCTGGCGAACAAAATGCCTATGCGGTTGATGTCAATGGGGTGGTCAGCAAT TTGCCCTCGCTTGATGGCACTGCCCTGCTGGTGTTTGAAGGCCAAACTGGGATTCAACTGGCAGTCGCAGCCTATTCCGA GGGCGGCAATCCACCCAGCCACAATCCAACTGCGCCGATTCCGTTAACTGCTGGCTCCTCGGAAGGCAACTTGATGGTCT TTTTCAATCAAGCCGCCGAAAGCCGCGCCAGTGAACTTAACCATCTACGGGTGATTACCACCACGATGTATGGTTCGTGC AGTAATTTGCCTAATGCCACTGGTGGCGCTCTCAGTCGTGGCTATATTTTTGCCCTGGCCAGCAATGCCGCCTTGCCCAG CGATGTGGGTGCGAGTGTGCCGCTCAAACCAACTCTGGTGTTGAACTATGATAATGCGGCCTTGCTCAGCCTTGGTACAA CCGCTGGAATTGCTGGCGTTTTGCAGGTGTACAGTGCTAATGGAGCCACGCCGCAAGCTGAAGCTTCCAAGCATTTTGTT GATCGCGGGTATGTGGCTTTGGCATTGAACGCCACCAGTGCTAGCGGTTTATTCGCAAGCAACCCAACACCTGAATTCTT TCGATTGTATGGTCAGCAATTTACGATTTAA
Upstream 100 bases:
>100_bases TCCGCGTAATTGAAGCAACATTCTAGTGCTACTATACTCGATTTTGATCGGCTTTGCTACCAGAGTAGCCCTTGTTTTGT GACATTGGGGGAATGCGATC
Downstream 100 bases:
>100_bases TTGCAGCATACCCATAGAATTCGACTCGCGAACTGTCCTTGAGGGGTGTGATACGCTGTCGATTGATATGCCCTCGCCTG CGGGCGAGGGCATGGGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MSTPHAQVYFNRYNLFNTTPNPAPSGNTDWYTNQPIMQLSNPQLTQRVPSQTALLTNWSLPNANLLGLQDLNWAFCVYDL QQQLATSANADDLPNAPLAYAQVQATHNTTQSTIATKVCLFNVLVAIEWVPSAIELNQLQWAFRRASDFLFDVSNGTMAF GQVVFGGVQHMRAADIQILASNRYHPRSWREGLYTDAKHMPIRLGRGMWERQGSFSIPWHEPEGYRVIVHEWMHYAIGLR DQYINSNNAEHPDLALPSFNPTAESIMAHLVGSSEVMRIEGGDDVWQPFRAQTGAGLPYSAMATAPFDQPRVGPERLPLP LPLFQHSFGSNPTAEVINLPIAETPLAGLKHGWVYVLRGSLNDPSTIIPQGSLDSRVNSQGFKLLGANSDDYVVVIGDQA NGSTAVYVAQLEGNPPECNWLECTPSQFPLVAVMPYGSVTQGSYSVKVVTESGLTPTAIYVAAAGEQNAYAVDVNGVVSN LPSLDGTALLVFEGQTGIQLAVAAYSEGGNPPSHNPTAPIPLTAGSSEGNLMVFFNQAAESRASELNHLRVITTTMYGSC SNLPNATGGALSRGYIFALASNAALPSDVGASVPLKPTLVLNYDNAALLSLGTTAGIAGVLQVYSANGATPQAEASKHFV DRGYVALALNATSASGLFASNPTPEFFRLYGQQFTI
Sequences:
>Translated_676_residues MSTPHAQVYFNRYNLFNTTPNPAPSGNTDWYTNQPIMQLSNPQLTQRVPSQTALLTNWSLPNANLLGLQDLNWAFCVYDL QQQLATSANADDLPNAPLAYAQVQATHNTTQSTIATKVCLFNVLVAIEWVPSAIELNQLQWAFRRASDFLFDVSNGTMAF GQVVFGGVQHMRAADIQILASNRYHPRSWREGLYTDAKHMPIRLGRGMWERQGSFSIPWHEPEGYRVIVHEWMHYAIGLR DQYINSNNAEHPDLALPSFNPTAESIMAHLVGSSEVMRIEGGDDVWQPFRAQTGAGLPYSAMATAPFDQPRVGPERLPLP LPLFQHSFGSNPTAEVINLPIAETPLAGLKHGWVYVLRGSLNDPSTIIPQGSLDSRVNSQGFKLLGANSDDYVVVIGDQA NGSTAVYVAQLEGNPPECNWLECTPSQFPLVAVMPYGSVTQGSYSVKVVTESGLTPTAIYVAAAGEQNAYAVDVNGVVSN LPSLDGTALLVFEGQTGIQLAVAAYSEGGNPPSHNPTAPIPLTAGSSEGNLMVFFNQAAESRASELNHLRVITTTMYGSC SNLPNATGGALSRGYIFALASNAALPSDVGASVPLKPTLVLNYDNAALLSLGTTAGIAGVLQVYSANGATPQAEASKHFV DRGYVALALNATSASGLFASNPTPEFFRLYGQQFTI >Mature_675_residues STPHAQVYFNRYNLFNTTPNPAPSGNTDWYTNQPIMQLSNPQLTQRVPSQTALLTNWSLPNANLLGLQDLNWAFCVYDLQ QQLATSANADDLPNAPLAYAQVQATHNTTQSTIATKVCLFNVLVAIEWVPSAIELNQLQWAFRRASDFLFDVSNGTMAFG QVVFGGVQHMRAADIQILASNRYHPRSWREGLYTDAKHMPIRLGRGMWERQGSFSIPWHEPEGYRVIVHEWMHYAIGLRD QYINSNNAEHPDLALPSFNPTAESIMAHLVGSSEVMRIEGGDDVWQPFRAQTGAGLPYSAMATAPFDQPRVGPERLPLPL PLFQHSFGSNPTAEVINLPIAETPLAGLKHGWVYVLRGSLNDPSTIIPQGSLDSRVNSQGFKLLGANSDDYVVVIGDQAN GSTAVYVAQLEGNPPECNWLECTPSQFPLVAVMPYGSVTQGSYSVKVVTESGLTPTAIYVAAAGEQNAYAVDVNGVVSNL PSLDGTALLVFEGQTGIQLAVAAYSEGGNPPSHNPTAPIPLTAGSSEGNLMVFFNQAAESRASELNHLRVITTTMYGSCS NLPNATGGALSRGYIFALASNAALPSDVGASVPLKPTLVLNYDNAALLSLGTTAGIAGVLQVYSANGATPQAEASKHFVD RGYVALALNATSASGLFASNPTPEFFRLYGQQFTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72791; Mature: 72660
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPHAQVYFNRYNLFNTTPNPAPSGNTDWYTNQPIMQLSNPQLTQRVPSQTALLTNWSL CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCEEEEEECCC PNANLLGLQDLNWAFCVYDLQQQLATSANADDLPNAPLAYAQVQATHNTTQSTIATKVCL CCCCEEEECCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH FNVLVAIEWVPSAIELNQLQWAFRRASDFLFDVSNGTMAFGQVVFGGVQHMRAADIQILA HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEE SNRYHPRSWREGLYTDAKHMPIRLGRGMWERQGSFSIPWHEPEGYRVIVHEWMHYAIGLR CCCCCCHHHHCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHCCH DQYINSNNAEHPDLALPSFNPTAESIMAHLVGSSEVMRIEGGDDVWQPFRAQTGAGLPYS HHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCH AMATAPFDQPRVGPERLPLPLPLFQHSFGSNPTAEVINLPIAETPLAGLKHGWVYVLRGS HEECCCCCCCCCCHHHCCCCCHHHHHHCCCCCCHHEEECCCCCCCCCCCCCCEEEEEECC LNDPSTIIPQGSLDSRVNSQGFKLLGANSDDYVVVIGDQANGSTAVYVAQLEGNPPECNW CCCCCEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCE LECTPSQFPLVAVMPYGSVTQGSYSVKVVTESGLTPTAIYVAAAGEQNAYAVDVNGVVSN EEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEECHHHHC LPSLDGTALLVFEGQTGIQLAVAAYSEGGNPPSHNPTAPIPLTAGSSEGNLMVFFNQAAE CCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHH SRASELNHLRVITTTMYGSCSNLPNATGGALSRGYIFALASNAALPSDVGASVPLKPTLV HHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE LNYDNAALLSLGTTAGIAGVLQVYSANGATPQAEASKHFVDRGYVALALNATSASGLFAS EEECCCEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEECC NPTPEFFRLYGQQFTI CCCHHHHHHCCCCCCC >Mature Secondary Structure STPHAQVYFNRYNLFNTTPNPAPSGNTDWYTNQPIMQLSNPQLTQRVPSQTALLTNWSL CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCEEEEEECCC PNANLLGLQDLNWAFCVYDLQQQLATSANADDLPNAPLAYAQVQATHNTTQSTIATKVCL CCCCEEEECCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHH FNVLVAIEWVPSAIELNQLQWAFRRASDFLFDVSNGTMAFGQVVFGGVQHMRAADIQILA HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEE SNRYHPRSWREGLYTDAKHMPIRLGRGMWERQGSFSIPWHEPEGYRVIVHEWMHYAIGLR CCCCCCHHHHCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHCCH DQYINSNNAEHPDLALPSFNPTAESIMAHLVGSSEVMRIEGGDDVWQPFRAQTGAGLPYS HHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCH AMATAPFDQPRVGPERLPLPLPLFQHSFGSNPTAEVINLPIAETPLAGLKHGWVYVLRGS HEECCCCCCCCCCHHHCCCCCHHHHHHCCCCCCHHEEECCCCCCCCCCCCCCEEEEEECC LNDPSTIIPQGSLDSRVNSQGFKLLGANSDDYVVVIGDQANGSTAVYVAQLEGNPPECNW CCCCCEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCE LECTPSQFPLVAVMPYGSVTQGSYSVKVVTESGLTPTAIYVAAAGEQNAYAVDVNGVVSN EEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEECHHHHC LPSLDGTALLVFEGQTGIQLAVAAYSEGGNPPSHNPTAPIPLTAGSSEGNLMVFFNQAAE CCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHH SRASELNHLRVITTTMYGSCSNLPNATGGALSRGYIFALASNAALPSDVGASVPLKPTLV HHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE LNYDNAALLSLGTTAGIAGVLQVYSANGATPQAEASKHFVDRGYVALALNATSASGLFAS EEECCCEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEECC NPTPEFFRLYGQQFTI CCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA