| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mtlR [H]
Identifier: 159898049
GI number: 159898049
Start: 1776332
End: 1777873
Strand: Direct
Name: mtlR [H]
Synonym: Haur_1524
Alternate gene names: 159898049
Gene position: 1776332-1777873 (Clockwise)
Preceding gene: 159898048
Following gene: 159898050
Centisome position: 27.99
GC content: 52.33
Gene sequence:
>1542_bases ATGCTGTCGCTGACGACTGCTCAACGTGATCTGTTGTATCTGTTGCTTACCACTGAGACTCCAATCGGGGCTGCGGCACT CGGTCAGTGTCTCCATCTCACACCACGCCAAGTTTCCTATAGTTTACGGAGTATTAAGCTGTGGTTGGCTCGTCGCCATG CCAGTTTGCGCCAAGTGCCTGGGGTTGGCATGCAGCTGATCTGCTCGGCCCAGCAACGTGAACGGCTTTATGCTGAGCTA GAATCGCATGCCAAATTTCAATTAATTCTCACGCCCGAACAACGTGGTCAGCTTTTGGCCTTAGTGCTGTTGATTACCCC CGAACCCTTGACCCTCAACCAACTCCAGCAAGATTTAGCAGTTGCTCGCACGACGGTGCTTAAAGATCTCGATGTCATGG AGATTTGGTTGGCCAGTTTTGGTTTGCAAGTGGTGCGGCGACAACATCGCGGCTGCTGGATCGAAGGCGCTGAGTTGGCG AAACGCCAAGCCTTGGCAGCCTTGTTATGGGGCGATGTGCCCTTTAGTTTGCCAATTATCAGCGTGCAAGCGGGCCTTGG CTTTGATTTTGTGTTGCAACAAGATGCAGCCCTCTTACCGATTATTCAACGGGTCAATAGCTTTTTGCAGGAGCTTGATC TGCCTAAAGCCCAACAGCAGGCGATCTGGGCCGAAGCTGCCTTGAATGCGCGGTTTAGCGATCAGGCAATTAGTTTGCTG GCTTTGGCCTTGGCTTTGCAACAGCAACGGATCAATGCTCAACAGTATCTCCATTGGCATCCCGAAACATTACATTGGCT GGAACAGCAGTTGGTTTGGTCAGTTGCTACGCAATTTGAGCAACATTATGGTTTGCAGGCCAGTGCAACGATCGATCTTG CTGAAATTGCTGGTGTAGCCTTGCAATTGGTGTGTGCTGCCCGCGAACGGCCATGGCCCAATCAGCATGAGACCGATCAC GTAACCGTTCGGTTGATCAATGCACTGATTGATTTGATTGCCAGTAGCTACGATGTCGCAGAGCTTGCCAACGATCAGCT TTTGGGTGATGGTTTGGCCGCCTTGATTCCGCCAGCCTGCAATCGCCAGCGCTTTGGTTTGTGGATTCCGACCCATCAAT CCAGCGAAACGCAGAGTGAACGTTATGCAACTGAGCGGCGGGTGGCCGATTTAATTGATCGCAAGCTGCTGGCAACGATT GGTGTAGCTTTGCCGATTGATGCCCGTGATGAGCTGATTTTGTTGTTGCGGGCAGCGGTGGTGCGGGCGCGGCCTGTGCA AACCCGCAATATTCTGGTGGTTTGCCCGAGCGGCATGGCCACAACTCAACTGTTGGTAGCACGGCTCAAAGCACGGTTTC CCAAACTGGGTATTTTTGAAGTGCTCTCGATGCGCGAGCTTTCGGCAGAACGTTTAGCCAATGCCGATTTGGTGATTACG ACTGCGCCTTTAGCATTGGCTAGTGTGCCAATTGATGTCATCCAAGTGCATCCAATGCTGCACCCAGAAGATATTGCGGC GCTGACCCAGTGGATGGTTTAG
Upstream 100 bases:
>100_bases CCATGATTTAGCGCTTGACAATGGGCTAAAACGCGGCTAGCATACATTAACTCTCTGATTGTAGGGAACCTATTTCGCTC TACGACTATGGGGTAAACGT
Downstream 100 bases:
>100_bases CCTGCTAAATCATCGCATTTTGTCGTAATAGCGCAACCAAAAGACAGATTAATAAAATGGGTTTTATGGCTTGACAATGG CCTAAAACGCTTGTACGTTA
Product: transcriptional antiterminator, BglG
Products: NA
Alternate protein names: Mannitol operon transcriptional activator; Mtl operon transcriptional activator; Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MLSLTTAQRDLLYLLLTTETPIGAAALGQCLHLTPRQVSYSLRSIKLWLARRHASLRQVPGVGMQLICSAQQRERLYAEL ESHAKFQLILTPEQRGQLLALVLLITPEPLTLNQLQQDLAVARTTVLKDLDVMEIWLASFGLQVVRRQHRGCWIEGAELA KRQALAALLWGDVPFSLPIISVQAGLGFDFVLQQDAALLPIIQRVNSFLQELDLPKAQQQAIWAEAALNARFSDQAISLL ALALALQQQRINAQQYLHWHPETLHWLEQQLVWSVATQFEQHYGLQASATIDLAEIAGVALQLVCAARERPWPNQHETDH VTVRLINALIDLIASSYDVAELANDQLLGDGLAALIPPACNRQRFGLWIPTHQSSETQSERYATERRVADLIDRKLLATI GVALPIDARDELILLLRAAVVRARPVQTRNILVVCPSGMATTQLLVARLKARFPKLGIFEVLSMRELSAERLANADLVIT TAPLALASVPIDVIQVHPMLHPEDIAALTQWMV
Sequences:
>Translated_513_residues MLSLTTAQRDLLYLLLTTETPIGAAALGQCLHLTPRQVSYSLRSIKLWLARRHASLRQVPGVGMQLICSAQQRERLYAEL ESHAKFQLILTPEQRGQLLALVLLITPEPLTLNQLQQDLAVARTTVLKDLDVMEIWLASFGLQVVRRQHRGCWIEGAELA KRQALAALLWGDVPFSLPIISVQAGLGFDFVLQQDAALLPIIQRVNSFLQELDLPKAQQQAIWAEAALNARFSDQAISLL ALALALQQQRINAQQYLHWHPETLHWLEQQLVWSVATQFEQHYGLQASATIDLAEIAGVALQLVCAARERPWPNQHETDH VTVRLINALIDLIASSYDVAELANDQLLGDGLAALIPPACNRQRFGLWIPTHQSSETQSERYATERRVADLIDRKLLATI GVALPIDARDELILLLRAAVVRARPVQTRNILVVCPSGMATTQLLVARLKARFPKLGIFEVLSMRELSAERLANADLVIT TAPLALASVPIDVIQVHPMLHPEDIAALTQWMV >Mature_513_residues MLSLTTAQRDLLYLLLTTETPIGAAALGQCLHLTPRQVSYSLRSIKLWLARRHASLRQVPGVGMQLICSAQQRERLYAEL ESHAKFQLILTPEQRGQLLALVLLITPEPLTLNQLQQDLAVARTTVLKDLDVMEIWLASFGLQVVRRQHRGCWIEGAELA KRQALAALLWGDVPFSLPIISVQAGLGFDFVLQQDAALLPIIQRVNSFLQELDLPKAQQQAIWAEAALNARFSDQAISLL ALALALQQQRINAQQYLHWHPETLHWLEQQLVWSVATQFEQHYGLQASATIDLAEIAGVALQLVCAARERPWPNQHETDH VTVRLINALIDLIASSYDVAELANDQLLGDGLAALIPPACNRQRFGLWIPTHQSSETQSERYATERRVADLIDRKLLATI GVALPIDARDELILLLRAAVVRARPVQTRNILVVCPSGMATTQLLVARLKARFPKLGIFEVLSMRELSAERLANADLVIT TAPLALASVPIDVIQVHPMLHPEDIAALTQWMV
Specific function: Positively regulates the expression of the mtlAFD operon involved in the uptake and catabolism of mannitol [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 57097; Mature: 57097
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLTTAQRDLLYLLLTTETPIGAAALGQCLHLTPRQVSYSLRSIKLWLARRHASLRQVP CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GVGMQLICSAQQRERLYAELESHAKFQLILTPEQRGQLLALVLLITPEPLTLNQLQQDLA CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHH VARTTVLKDLDVMEIWLASFGLQVVRRQHRGCWIEGAELAKRQALAALLWGDVPFSLPII HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEE SVQAGLGFDFVLQQDAALLPIIQRVNSFLQELDLPKAQQQAIWAEAALNARFSDQAISLL EEECCCCEEEHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH ALALALQQQRINAQQYLHWHPETLHWLEQQLVWSVATQFEQHYGLQASATIDLAEIAGVA HHHHHHHHHHCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH LQLVCAARERPWPNQHETDHVTVRLINALIDLIASSYDVAELANDQLLGDGLAALIPPAC HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCHHHHCCCCC NRQRFGLWIPTHQSSETQSERYATERRVADLIDRKLLATIGVALPIDARDELILLLRAAV CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VRARPVQTRNILVVCPSGMATTQLLVARLKARFPKLGIFEVLSMRELSAERLANADLVIT HHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEE TAPLALASVPIDVIQVHPMLHPEDIAALTQWMV ECCHHHHHCCEEHEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MLSLTTAQRDLLYLLLTTETPIGAAALGQCLHLTPRQVSYSLRSIKLWLARRHASLRQVP CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GVGMQLICSAQQRERLYAELESHAKFQLILTPEQRGQLLALVLLITPEPLTLNQLQQDLA CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHH VARTTVLKDLDVMEIWLASFGLQVVRRQHRGCWIEGAELAKRQALAALLWGDVPFSLPII HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEE SVQAGLGFDFVLQQDAALLPIIQRVNSFLQELDLPKAQQQAIWAEAALNARFSDQAISLL EEECCCCEEEHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH ALALALQQQRINAQQYLHWHPETLHWLEQQLVWSVATQFEQHYGLQASATIDLAEIAGVA HHHHHHHHHHCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH LQLVCAARERPWPNQHETDHVTVRLINALIDLIASSYDVAELANDQLLGDGLAALIPPAC HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCHHHHCCCCC NRQRFGLWIPTHQSSETQSERYATERRVADLIDRKLLATIGVALPIDARDELILLLRAAV CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VRARPVQTRNILVVCPSGMATTQLLVARLKARFPKLGIFEVLSMRELSAERLANADLVIT HHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEE TAPLALASVPIDVIQVHPMLHPEDIAALTQWMV ECCHHHHHCCEEHEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]