| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898040
Identifier: 159898040
GI number: 159898040
Start: 1766952
End: 1768712
Strand: Direct
Name: 159898040
Synonym: Haur_1515
Alternate gene names: NA
Gene position: 1766952-1768712 (Clockwise)
Preceding gene: 159898039
Following gene: 159898041
Centisome position: 27.84
GC content: 50.71
Gene sequence:
>1761_bases ATGGCTCTTTTTCTGGGGTTGTTGTTGGCCCAAGTTGGCGTAGCCGCACCGCAAAGTGCGGTTGTGGCAGGCGAATTACG CGCCGACGCGACATTTAGCCACATTGGAGTCTCGTGGGCGATTAGCGGCGATACCAATCGCAATAGTACGCTAACCTTGG AATATCGTTTGGTTGGTAGCTCAACTTGGCGAGCTGCTGCTCCAGCCATGCGAGCCAATCCTAGCACGATTGTTGAGGGC GTAGCGCTCAATCGCAATTATCACGCCGCCAGCGCAATGTGGCTCAGCGATGGCGAAGAGTATGAATTACGGGCCACTTT AACCGATCCCGATGGCGGTAACACAACCCGCACGATCACCAAACGTACCCGTAGCCTTGCCGATTTTGGCCCAACTGTGC GCACACGCTTTGTGGTTCCTGGCAATGGCGGTGGTGATGGTACGCTCAATAATCCATATCAAGGCATCCAAACCGCAGTC GATAATGCTGAACCAGGCGATACCTTCACCTTGGCAGCCGGAACCTATCAGCCCTTCCAGATTCTGGCCAGCGGCACGCA AGCCCAACCAATTCGGATCAGCGGGCCGCTCAATCGCAAGGCGATTATTGATGGAGCCAATACGACCCGTGGTGTTGTCA CGCTTGGCGAGAGCAATCAAACCCTTGGCTTTGTGATTTTGGAGAACTTGACGATTCAAAACGGTGCTTGGGGCATCGAT GCCCAACATACGCACGATATTCTGATTAGCCGTAATGTGATTCGTGATGTTGGCTTTGGCATTTACAACCGTCGCCAAAC CCATCAAGAATACAACCAAACCGTGATCGATAATGTGATTACTGGCCGCACGACCTGGCCAGGCACAGGCATTCCCAGCG AGCGTGGCCTCGATTTACGTGGTACTGGCAATGTGGTGGCCTATAACAGCGTGATGAATTTTGGTGATTGTATCTCGGTG CAGCCGTGGAATGCCCAAAGCAGCTATGGCCAAGATATTTACCATAACGAAGCGGCATTTTGTGTTGATGATGGAATTGA GATCGATTATAACCAAGCTAATACGCGAGTTTGGAATAATCGGGTGACCAATGCTCGCACTGGGGTCAGCATTCAGCCAA TTTATGGCGGGCCAGCTTACATGTTTCGCAATAACTTTTTTAATATTGCTGGTGCGCCCTTCAAATTGCACAATCAACCA ACTGGCTTGTTTATCGCCCACAATAGCTCGGCACGAATCGGCAATGCGCTGAGTGATGATGGTCAGCAGTGGCGCAATAC CATTATTCGCAATAATTTCATGCTTGGCACACGCTATGCCTTTGAGTTTATGACGATTGCCGACGAAGGCTTTCGCGATG TCGATTACAACGGCTGGGGAACCAACCACGCCAGCGATTCGCCTTCAGCACCTGATTTTAAATGGAATAATGAACGTTAT TTGCGGTTGAGCAATTTGCAACAAATTGGGGTTGAAACCCATGGCGTAACCGTGAGTTTCAATGATGTCTATAATGCCAC GCTGCCAGCCTCGGTCGATGTGGCCTCGCCGATTGGCGAAGCCGATTTACGTTTGCAAAACAGCTCGGTGGCGATTAATA AAGGTGCAGTAATTGCCAACCTCAATGATCCATTTGTCACCGATGGTCAGCCCGATTTAGGTGCGTTTGAATTGGGCAAG CCGCTGCCGCACTATGGCCCACGCATCGATTATCAAATTCCAAGCAATATTCGGGTTTACCTGCCATTAGCTCGGCGTTA A
Upstream 100 bases:
>100_bases ACGTTGTTTTGTTTTAACTTCCGCAATTGCATGCTATAATCCTGCCCTTATTGCCTAACCATTATTAATTTTTAAGGAGG CAGGCTTGAAATCTATTCTT
Downstream 100 bases:
>100_bases TCTGACACAATAACGTCCTGATCTACGAAGAATCAGGGCATTTTTACTTTTTGAGGTCTACGTGATGCAAACACCATCGA AACTGGCCTATATTCCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGSSTWRAAAPAMRANPSTIVEG VALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTITKRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAV DNAEPGDTFTLAAGTYQPFQILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLRGTGNVVAYNSVMNFGDCISV QPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNNRVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQP TGLFIAHNSSARIGNALSDDGQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIANLNDPFVTDGQPDLGAFELGK PLPHYGPRIDYQIPSNIRVYLPLARR
Sequences:
>Translated_586_residues MALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGSSTWRAAAPAMRANPSTIVEG VALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTITKRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAV DNAEPGDTFTLAAGTYQPFQILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLRGTGNVVAYNSVMNFGDCISV QPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNNRVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQP TGLFIAHNSSARIGNALSDDGQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIANLNDPFVTDGQPDLGAFELGK PLPHYGPRIDYQIPSNIRVYLPLARR >Mature_585_residues ALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGSSTWRAAAPAMRANPSTIVEGV ALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTITKRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAVD NAEPGDTFTLAAGTYQPFQILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGIDA QHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLRGTGNVVAYNSVMNFGDCISVQ PWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNNRVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQPT GLFIAHNSSARIGNALSDDGQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERYL RLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIANLNDPFVTDGQPDLGAFELGKP LPHYGPRIDYQIPSNIRVYLPLARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63807; Mature: 63675
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGS CHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECEEEEEECCCCCCCCEEEEEEEEECC STWRAAAPAMRANPSTIVEGVALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTIT CCCHHCCCCCCCCCHHHEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHH KRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAVDNAEPGDTFTLAAGTYQPFQ HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHH ILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID HEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCC AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLR CCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC GTGNVVAYNSVMNFGDCISVQPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNN CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCCEEEEECCCEEEECCCCCEEECC RVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQPTGLFIAHNSSARIGNALSDD CCCCCCCCCEEEEECCCCEEEEECCEEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCC GQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY HHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEE LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIAN EEECCHHHCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCEEEEE LNDPFVTDGQPDLGAFELGKPLPHYGPRIDYQIPSNIRVYLPLARR CCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEECCC >Mature Secondary Structure ALFLGLLLAQVGVAAPQSAVVAGELRADATFSHIGVSWAISGDTNRNSTLTLEYRLVGS HHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECEEEEEECCCCCCCCEEEEEEEEECC STWRAAAPAMRANPSTIVEGVALNRNYHAASAMWLSDGEEYELRATLTDPDGGNTTRTIT CCCHHCCCCCCCCCHHHEEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHH KRTRSLADFGPTVRTRFVVPGNGGGDGTLNNPYQGIQTAVDNAEPGDTFTLAAGTYQPFQ HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHH ILASGTQAQPIRISGPLNRKAIIDGANTTRGVVTLGESNQTLGFVILENLTIQNGAWGID HEECCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCC AQHTHDILISRNVIRDVGFGIYNRRQTHQEYNQTVIDNVITGRTTWPGTGIPSERGLDLR CCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC GTGNVVAYNSVMNFGDCISVQPWNAQSSYGQDIYHNEAAFCVDDGIEIDYNQANTRVWNN CCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCCEEEEECCCEEEECCCCCEEECC RVTNARTGVSIQPIYGGPAYMFRNNFFNIAGAPFKLHNQPTGLFIAHNSSARIGNALSDD CCCCCCCCCEEEEECCCCEEEEECCEEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCC GQQWRNTIIRNNFMLGTRYAFEFMTIADEGFRDVDYNGWGTNHASDSPSAPDFKWNNERY HHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEE LRLSNLQQIGVETHGVTVSFNDVYNATLPASVDVASPIGEADLRLQNSSVAINKGAVIAN EEECCHHHCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCEEEEE LNDPFVTDGQPDLGAFELGKPLPHYGPRIDYQIPSNIRVYLPLARR CCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA