| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is smtA [C]
Identifier: 159897944
GI number: 159897944
Start: 1638391
End: 1639026
Strand: Reverse
Name: smtA [C]
Synonym: Haur_1419
Alternate gene names: 159897944
Gene position: 1639026-1638391 (Counterclockwise)
Preceding gene: 159897945
Following gene: 159897942
Centisome position: 25.83
GC content: 49.06
Gene sequence:
>636_bases ATGCAATCGTGGTCGGATGATATTCAGCAACAAGCCGCCGTGTTTAACGCGATTGGGGCCGATTATGAGGTGATGTTTGG CAATAATCAAGATCAACAGGATCTCAGTCAATGGTTGGCTGATCTGTTGGAGCCAAACTCGAAGGTGCTCGATTCCGGCT GTGGTACAGGCATTCCCACCGCCCAAACCTTGGCCAAAGCTGGCCATGCAGTAACCTGTCTCGAAATTTCAGCCTCAATG CTCAATTTGGCGCGGCAAAATGTGCCCAATGGTCAATATGTACTCGATAGTGTTAATCACGTTAATTTTGAGCCAGCCTC GTTTGATGCGGTTGTCTCGTTTTTTGCCTTGCTAATGCTGCGCCGCAGTGATATCGAGCATGCGTTACAACAATTCCATC ATTGGCTCAAACCTGCGGGCTTGTTGCTGCTCTCAATGGTCGAAGGCGATTTCGATTATATTCAAATTGTGCTCGGCGAT CAGCCAGTCTTTGTGACGGCCTACCCTCAAGCCCAACTTGAAGCCTTGATCACCAAATCAGGCTTCCAAATTCTCGAAAC CCGCTTGCAACATTATGTGCCCCACCACGGCGCAACTCCTGAAACCCAAATTTTCATCGTCGCCCAACGCGATTAA
Upstream 100 bases:
>100_bases TTAAACAGGTTCTTTGATCGTCCTGTGAAGCGTTCACAACAGCAACCAAAGCCCCACGAGGATAACACCCCACCAACAGG CTTGGTTTAAGGAGAGCATT
Downstream 100 bases:
>100_bases ATTCCCTCTACACCCTAGCTTTCATACGACAACGCAACTTAAAAAGCCCCTCTCCCACCGCAGTGGGAGAGGGGTTGAGG TGAGGGGACATTAAAACTCG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MQSWSDDIQQQAAVFNAIGADYEVMFGNNQDQQDLSQWLADLLEPNSKVLDSGCGTGIPTAQTLAKAGHAVTCLEISASM LNLARQNVPNGQYVLDSVNHVNFEPASFDAVVSFFALLMLRRSDIEHALQQFHHWLKPAGLLLLSMVEGDFDYIQIVLGD QPVFVTAYPQAQLEALITKSGFQILETRLQHYVPHHGATPETQIFIVAQRD
Sequences:
>Translated_211_residues MQSWSDDIQQQAAVFNAIGADYEVMFGNNQDQQDLSQWLADLLEPNSKVLDSGCGTGIPTAQTLAKAGHAVTCLEISASM LNLARQNVPNGQYVLDSVNHVNFEPASFDAVVSFFALLMLRRSDIEHALQQFHHWLKPAGLLLLSMVEGDFDYIQIVLGD QPVFVTAYPQAQLEALITKSGFQILETRLQHYVPHHGATPETQIFIVAQRD >Mature_211_residues MQSWSDDIQQQAAVFNAIGADYEVMFGNNQDQQDLSQWLADLLEPNSKVLDSGCGTGIPTAQTLAKAGHAVTCLEISASM LNLARQNVPNGQYVLDSVNHVNFEPASFDAVVSFFALLMLRRSDIEHALQQFHHWLKPAGLLLLSMVEGDFDYIQIVLGD QPVFVTAYPQAQLEALITKSGFQILETRLQHYVPHHGATPETQIFIVAQRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23396; Mature: 23396
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSWSDDIQQQAAVFNAIGADYEVMFGNNQDQQDLSQWLADLLEPNSKVLDSGCGTGIPT CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCH AQTLAKAGHAVTCLEISASMLNLARQNVPNGQYVLDSVNHVNFEPASFDAVVSFFALLML HHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH RRSDIEHALQQFHHWLKPAGLLLLSMVEGDFDYIQIVLGDQPVFVTAYPQAQLEALITKS HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH GFQILETRLQHYVPHHGATPETQIFIVAQRD HHHHHHHHHHHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MQSWSDDIQQQAAVFNAIGADYEVMFGNNQDQQDLSQWLADLLEPNSKVLDSGCGTGIPT CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCH AQTLAKAGHAVTCLEISASMLNLARQNVPNGQYVLDSVNHVNFEPASFDAVVSFFALLML HHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH RRSDIEHALQQFHHWLKPAGLLLLSMVEGDFDYIQIVLGDQPVFVTAYPQAQLEALITKS HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHH GFQILETRLQHYVPHHGATPETQIFIVAQRD HHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA