| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is celK [H]
Identifier: 159897943
GI number: 159897943
Start: 1635363
End: 1638146
Strand: Direct
Name: celK [H]
Synonym: Haur_1418
Alternate gene names: 159897943
Gene position: 1635363-1638146 (Clockwise)
Preceding gene: 159897939
Following gene: 159897949
Centisome position: 25.77
GC content: 50.36
Gene sequence:
>2784_bases ATGAGCGCTGACCACAGCCGTACCGTGATTGGTATCCGTTCGACGAGGAGCTTTTGGGCACGAGGATTTTTCGTCTTTTG GTTGATTATTGCTTTAGGCTGCCAACAAGCGATTGTTCCAGCCACCTCTCAGATTTATGCCCAACCCCCGCAAACTGTTG GTAATTTGCTGCAAAATGGCGATTTCAGCGCTGGTTTTGCGCCATGGTGGGCCACAAGCTCGGTTGCTACTGATACTGCG AGTGGCGCATTAGTCGCAACCATCAATAATGCTGGTAGTAATCCATGGGATGCAATCGTTGGCCAAAATGGAGTTACGCT TCAATCAGGCCAAACCTACACCGTCACGTTTCGCATCCGTGCCTCAACCACTGGTACTGTGGTGATGAAACTGCAAAAAG AGGCCTCTCCCTATACCAACTATTTTAGCCAAGACGTGGCTTTGACTACTAGCGATCAAGCCCATCAATTTGTCTTTACC TCAGGCTTTGATGATGCTGGGGCTGCTTTTCAATTTCAAATGGGCGGCCAAGGCACGAATGTACTGACAATTGACGATGT GCAAGTGTTGGGCGAAACTGGCCCGGTCGAGCCATCGGGCAATTTGGTGCAAAATGGCGAGTTTGTTGGTGGCCTACCGC CTTGGTGGACTGGCGGCGATGTCAGTGTGAACACCGATGATGGCGCGTGTTTGACGATCAACACTCCTGGCACAAATCCT TGGGATGTGCAGCTTGGTCAACATACCATTGCGATTGAAGCTGGTGTGAGCTATCAGCTTAAATTTGCTGCCAAATCAAC TGTGCCAGTCACTTTGCCCGTGCGTTTGCAAAAAAATGCCGAGCCATACACTGGCTATTTTTCGGCTGATCCAGTGCTCA ACTCGGCCTGGACAGAATTTGTCTATAATTTTACATCGGCCTATAGCGATGCAGCTTCGTTGTTGTTCCAAATGGGTGGC ATCGGAACCCCGACGATCTGTATTGATCAGGTGAGTTTGTATATGTTAGAAACCGGAATTCGGGTCAACCAAGCCAGCTA TTTGCCCACGATGAGCAAAGTGGCAAGTTTGGTGCATCCTGCGACTGAGCCATTGGCTTGGCAATTGCATAACACTGCTG ATGCAGTGGTGGCAAGCGGCCAAACCACGGTGTATGGCGAAGAATCAGCCTCGGCTGAACATGTGCATTTGATCGATTTT TCAAGCTACCAAACGGTTGGTGAAGGCTATTATCTGAGCATCGGCAGCGAAACGAGCTATCCATTTGCCATCGAGGCAGG TTTGTATTCGCGGATGAAATATGATGCTTTGGCCTATTTCTACCATAATCGCAGCGGGATTGCGATTACCATGCCCTATG CTGGTGGCGAGCAATGGACGCGACCAGCTGGCCACATCGGGGTTGCACCCAACCAAGGCGATACCTCGGTAACCTGTTTT ACTGGCACTGACACCCAAGGTCAAAGCTGGCCCGGGTGCGATTATCAACTTGACGTTTCAAAGGGTTGGTACGACGCTGG CGACCATGGCAAATATGTGGTTAACAGTGGTATTTCGGTCTGGACGTTGCTTAATCAATATGAACGAGCGCAGCAACGTG GCCCTGCCAGCCTAGCCCAATTTGCCGATGGCACGATGAATATTCCCGAAAATAACAATGGCGTGCCCGATTTGTTGGAT GAAGTGCGCTGGAATATGGAGTTTATGCTAGGAATGCAAATTCCTACGACTGCGCCAGTTTCCAAAACGGGTATGGTGCA CCATAAAGTTCACGATGCGAACTGGACTGGTTTGCCAATGGCTCCACACGAAGATAGCCAAATGCGCTATTTGTATCCAC CAAGTACCGCCGCAACCTTGAACTTGGCTGCGACCGCTGCCCAATGTTCACGGATTTGGCGTGAGATCGATGAAGCCTTT GCTGATCGATGTTTGGTGGCGGCTGAACGCGCTTGGCAAGCAGCCTTGGCCTACCCTAACGAAATTGCCCGCGATAACTT CAATGGCGGTGGTGGCTATGGCGATAGCACCTTGAACGATGAATGGTATTGGGCCGCCGCCGAATTGTATATCACAACTG GCTCGGCCACCTATCGCGAAGCAATTGAAGAATCGAGCTATTACTTGCGGCTTGATCTTGGTGGTGGAAGCGCCATGAAC TGGGGCGGCGTGGCAAGCCTTGGCACCTTGTCGTTGGCCTTGGTTCCCAGTGATTTGAGTAGCGCGAATCGCCAAACTGC CCGTGCAGCAGTGATTGCAGCGGCTGATCAATTTGTGGCAGCGCAGCAATCCAGCGGTTATGGCATTCCATACAATCCTG GTGCGCAGTATCCTTGGGGTTCCAACTCATCAATTCTGAATAATATGATTGTAATGGGTTTGGCAGGCGACTTTACTGGA AATGCCAACTATGCCGATGCAATTAGCCAAGGCATGGATTACTTGCTGGGGCGTAATCCACTCAATCGCTCGTATATTTC GGGCTATGGCTCGGTCTCATTGACCAATCCACATCATCGCTTCTGGGCTAAGCAAATTAATCCAGAGTATCCTGGTACGC CGCCAGGTGTGGTGGCTGGGGGGCCAAATTCAAGCATTCAAGACCCTTATGCTCAAGTTGAATTAGCTGGTTGTGCGGCC TTGAAATGCTATGTTGATCATATCGATTCGTGGTCAACCAATGAAGTGACGATTAACTGGAACTCGCCGCTGGCATGGGT TGCGGCCTATCTTGATGATTATGATACAAGTTCGGTGCAGTATCTGCCGTTGATCAGTAAGTAA
Upstream 100 bases:
>100_bases TTGCATCGCACTGTAGCAGCAGCTTTCGTCTCAACAACCTTCCTTCATTTACACTGATGTATTGAGACCGATTCCAATGA AGTGAATCATGGAGGCAGCA
Downstream 100 bases:
>100_bases CTCCCTCCCCCCAACCTTATAAAGATAGGTTTTAAGACCCCTCACCCCAACCCCTCTCCCACTGCGGCGGGAGAGGGGCG ATCCAATGATCTCCCCCTCG
Product: cellulose 1,4-beta-cellobiosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 927; Mature: 926
Protein sequence:
>927_residues MSADHSRTVIGIRSTRSFWARGFFVFWLIIALGCQQAIVPATSQIYAQPPQTVGNLLQNGDFSAGFAPWWATSSVATDTA SGALVATINNAGSNPWDAIVGQNGVTLQSGQTYTVTFRIRASTTGTVVMKLQKEASPYTNYFSQDVALTTSDQAHQFVFT SGFDDAGAAFQFQMGGQGTNVLTIDDVQVLGETGPVEPSGNLVQNGEFVGGLPPWWTGGDVSVNTDDGACLTINTPGTNP WDVQLGQHTIAIEAGVSYQLKFAAKSTVPVTLPVRLQKNAEPYTGYFSADPVLNSAWTEFVYNFTSAYSDAASLLFQMGG IGTPTICIDQVSLYMLETGIRVNQASYLPTMSKVASLVHPATEPLAWQLHNTADAVVASGQTTVYGEESASAEHVHLIDF SSYQTVGEGYYLSIGSETSYPFAIEAGLYSRMKYDALAYFYHNRSGIAITMPYAGGEQWTRPAGHIGVAPNQGDTSVTCF TGTDTQGQSWPGCDYQLDVSKGWYDAGDHGKYVVNSGISVWTLLNQYERAQQRGPASLAQFADGTMNIPENNNGVPDLLD EVRWNMEFMLGMQIPTTAPVSKTGMVHHKVHDANWTGLPMAPHEDSQMRYLYPPSTAATLNLAATAAQCSRIWREIDEAF ADRCLVAAERAWQAALAYPNEIARDNFNGGGGYGDSTLNDEWYWAAAELYITTGSATYREAIEESSYYLRLDLGGGSAMN WGGVASLGTLSLALVPSDLSSANRQTARAAVIAAADQFVAAQQSSGYGIPYNPGAQYPWGSNSSILNNMIVMGLAGDFTG NANYADAISQGMDYLLGRNPLNRSYISGYGSVSLTNPHHRFWAKQINPEYPGTPPGVVAGGPNSSIQDPYAQVELAGCAA LKCYVDHIDSWSTNEVTINWNSPLAWVAAYLDDYDTSSVQYLPLISK
Sequences:
>Translated_927_residues MSADHSRTVIGIRSTRSFWARGFFVFWLIIALGCQQAIVPATSQIYAQPPQTVGNLLQNGDFSAGFAPWWATSSVATDTA SGALVATINNAGSNPWDAIVGQNGVTLQSGQTYTVTFRIRASTTGTVVMKLQKEASPYTNYFSQDVALTTSDQAHQFVFT SGFDDAGAAFQFQMGGQGTNVLTIDDVQVLGETGPVEPSGNLVQNGEFVGGLPPWWTGGDVSVNTDDGACLTINTPGTNP WDVQLGQHTIAIEAGVSYQLKFAAKSTVPVTLPVRLQKNAEPYTGYFSADPVLNSAWTEFVYNFTSAYSDAASLLFQMGG IGTPTICIDQVSLYMLETGIRVNQASYLPTMSKVASLVHPATEPLAWQLHNTADAVVASGQTTVYGEESASAEHVHLIDF SSYQTVGEGYYLSIGSETSYPFAIEAGLYSRMKYDALAYFYHNRSGIAITMPYAGGEQWTRPAGHIGVAPNQGDTSVTCF TGTDTQGQSWPGCDYQLDVSKGWYDAGDHGKYVVNSGISVWTLLNQYERAQQRGPASLAQFADGTMNIPENNNGVPDLLD EVRWNMEFMLGMQIPTTAPVSKTGMVHHKVHDANWTGLPMAPHEDSQMRYLYPPSTAATLNLAATAAQCSRIWREIDEAF ADRCLVAAERAWQAALAYPNEIARDNFNGGGGYGDSTLNDEWYWAAAELYITTGSATYREAIEESSYYLRLDLGGGSAMN WGGVASLGTLSLALVPSDLSSANRQTARAAVIAAADQFVAAQQSSGYGIPYNPGAQYPWGSNSSILNNMIVMGLAGDFTG NANYADAISQGMDYLLGRNPLNRSYISGYGSVSLTNPHHRFWAKQINPEYPGTPPGVVAGGPNSSIQDPYAQVELAGCAA LKCYVDHIDSWSTNEVTINWNSPLAWVAAYLDDYDTSSVQYLPLISK >Mature_926_residues SADHSRTVIGIRSTRSFWARGFFVFWLIIALGCQQAIVPATSQIYAQPPQTVGNLLQNGDFSAGFAPWWATSSVATDTAS GALVATINNAGSNPWDAIVGQNGVTLQSGQTYTVTFRIRASTTGTVVMKLQKEASPYTNYFSQDVALTTSDQAHQFVFTS GFDDAGAAFQFQMGGQGTNVLTIDDVQVLGETGPVEPSGNLVQNGEFVGGLPPWWTGGDVSVNTDDGACLTINTPGTNPW DVQLGQHTIAIEAGVSYQLKFAAKSTVPVTLPVRLQKNAEPYTGYFSADPVLNSAWTEFVYNFTSAYSDAASLLFQMGGI GTPTICIDQVSLYMLETGIRVNQASYLPTMSKVASLVHPATEPLAWQLHNTADAVVASGQTTVYGEESASAEHVHLIDFS SYQTVGEGYYLSIGSETSYPFAIEAGLYSRMKYDALAYFYHNRSGIAITMPYAGGEQWTRPAGHIGVAPNQGDTSVTCFT GTDTQGQSWPGCDYQLDVSKGWYDAGDHGKYVVNSGISVWTLLNQYERAQQRGPASLAQFADGTMNIPENNNGVPDLLDE VRWNMEFMLGMQIPTTAPVSKTGMVHHKVHDANWTGLPMAPHEDSQMRYLYPPSTAATLNLAATAAQCSRIWREIDEAFA DRCLVAAERAWQAALAYPNEIARDNFNGGGGYGDSTLNDEWYWAAAELYITTGSATYREAIEESSYYLRLDLGGGSAMNW GGVASLGTLSLALVPSDLSSANRQTARAAVIAAADQFVAAQQSSGYGIPYNPGAQYPWGSNSSILNNMIVMGLAGDFTGN ANYADAISQGMDYLLGRNPLNRSYISGYGSVSLTNPHHRFWAKQINPEYPGTPPGVVAGGPNSSIQDPYAQVELAGCAAL KCYVDHIDSWSTNEVTINWNSPLAWVAAYLDDYDTSSVQYLPLISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 dockerin domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR016134 - InterPro: IPR002105 - InterPro: IPR003305 - InterPro: IPR018242 - InterPro: IPR008979 - InterPro: IPR001701 - InterPro: IPR018221 - InterPro: IPR004197 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF02018 CBM_4_9; PF02927 CelD_N; PF00404 Dockerin_1; PF00759 Glyco_hydro_9 [H]
EC number: =3.2.1.91 [H]
Molecular weight: Translated: 99871; Mature: 99740
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00698 GLYCOSYL_HYDROL_F9_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADHSRTVIGIRSTRSFWARGFFVFWLIIALGCQQAIVPATSQIYAQPPQTVGNLLQNG CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHCCCCHHHHHHHHHCC DFSAGFAPWWATSSVATDTASGALVATINNAGSNPWDAIVGQNGVTLQSGQTYTVTFRIR CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEECCCEEEEEEEEE ASTTGTVVMKLQKEASPYTNYFSQDVALTTSDQAHQFVFTSGFDDAGAAFQFQMGGQGTN ECCCCEEEEEEECCCCCHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCE VLTIDDVQVLGETGPVEPSGNLVQNGEFVGGLPPWWTGGDVSVNTDDGACLTINTPGTNP EEEECCEEEECCCCCCCCCCCEEECCCEECCCCCCCCCCEEEEECCCCEEEEEECCCCCC WDVQLGQHTIAIEAGVSYQLKFAAKSTVPVTLPVRLQKNAEPYTGYFSADPVLNSAWTEF EEEEECCEEEEEEECCCEEEEEEECCCCEEEEEEEEECCCCCCCCEEECCCCHHHHHHHH VYNFTSAYSDAASLLFQMGGIGTPTICIDQVSLYMLETGIRVNQASYLPTMSKVASLVHP HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHEEEEECCCCEECCCCCCCCHHHHHHHHCC ATEPLAWQLHNTADAVVASGQTTVYGEESASAEHVHLIDFSSYQTVGEGYYLSIGSETSY CCCCEEEEECCCCCCEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCC PFAIEAGLYSRMKYDALAYFYHNRSGIAITMPYAGGEQWTRPAGHIGVAPNQGDTSVTCF CEEEECCHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEE TGTDTQGQSWPGCDYQLDVSKGWYDAGDHGKYVVNSGISVWTLLNQYERAQQRGPASLAQ ECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHH FADGTMNIPENNNGVPDLLDEVRWNMEFMLGMQIPTTAPVSKTGMVHHKVHDANWTGLPM HCCCCEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC APHEDSQMRYLYPPSTAATLNLAATAAQCSRIWREIDEAFADRCLVAAERAWQAALAYPN CCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EIARDNFNGGGGYGDSTLNDEWYWAAAELYITTGSATYREAIEESSYYLRLDLGGGSAMN HHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCC WGGVASLGTLSLALVPSDLSSANRQTARAAVIAAADQFVAAQQSSGYGIPYNPGAQYPWG CCCCCCCCEEEEEEECCCHHHCCHHHHHEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC SNSSILNNMIVMGLAGDFTGNANYADAISQGMDYLLGRNPLNRSYISGYGSVSLTNPHHR CCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCHHH FWAKQINPEYPGTPPGVVAGGPNSSIQDPYAQVELAGCAALKCYVDHIDSWSTNEVTINW HHHHHCCCCCCCCCCCEEECCCCCCCCCCHHEEEECCHHEEHHHHHHCCCCCCCEEEEEE NSPLAWVAAYLDDYDTSSVQYLPLISK CCCHHHHHHHHCCCCCCCEEEEEECCC >Mature Secondary Structure SADHSRTVIGIRSTRSFWARGFFVFWLIIALGCQQAIVPATSQIYAQPPQTVGNLLQNG CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHCCCCHHHHHHHHHCC DFSAGFAPWWATSSVATDTASGALVATINNAGSNPWDAIVGQNGVTLQSGQTYTVTFRIR CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEECCCEEEEEEEEE ASTTGTVVMKLQKEASPYTNYFSQDVALTTSDQAHQFVFTSGFDDAGAAFQFQMGGQGTN ECCCCEEEEEEECCCCCHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCE VLTIDDVQVLGETGPVEPSGNLVQNGEFVGGLPPWWTGGDVSVNTDDGACLTINTPGTNP EEEECCEEEECCCCCCCCCCCEEECCCEECCCCCCCCCCEEEEECCCCEEEEEECCCCCC WDVQLGQHTIAIEAGVSYQLKFAAKSTVPVTLPVRLQKNAEPYTGYFSADPVLNSAWTEF EEEEECCEEEEEEECCCEEEEEEECCCCEEEEEEEEECCCCCCCCEEECCCCHHHHHHHH VYNFTSAYSDAASLLFQMGGIGTPTICIDQVSLYMLETGIRVNQASYLPTMSKVASLVHP HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHEEEEECCCCEECCCCCCCCHHHHHHHHCC ATEPLAWQLHNTADAVVASGQTTVYGEESASAEHVHLIDFSSYQTVGEGYYLSIGSETSY CCCCEEEEECCCCCCEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCC PFAIEAGLYSRMKYDALAYFYHNRSGIAITMPYAGGEQWTRPAGHIGVAPNQGDTSVTCF CEEEECCHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEE TGTDTQGQSWPGCDYQLDVSKGWYDAGDHGKYVVNSGISVWTLLNQYERAQQRGPASLAQ ECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHH FADGTMNIPENNNGVPDLLDEVRWNMEFMLGMQIPTTAPVSKTGMVHHKVHDANWTGLPM HCCCCEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC APHEDSQMRYLYPPSTAATLNLAATAAQCSRIWREIDEAFADRCLVAAERAWQAALAYPN CCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EIARDNFNGGGGYGDSTLNDEWYWAAAELYITTGSATYREAIEESSYYLRLDLGGGSAMN HHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHCCCEEEEEECCCCCCCC WGGVASLGTLSLALVPSDLSSANRQTARAAVIAAADQFVAAQQSSGYGIPYNPGAQYPWG CCCCCCCCEEEEEEECCCHHHCCHHHHHEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC SNSSILNNMIVMGLAGDFTGNANYADAISQGMDYLLGRNPLNRSYISGYGSVSLTNPHHR CCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCHHH FWAKQINPEYPGTPPGVVAGGPNSSIQDPYAQVELAGCAALKCYVDHIDSWSTNEVTINW HHHHHCCCCCCCCCCCEEECCCCCCCCCCHHEEEECCHHEEHHHHHHCCCCCCCEEEEEE NSPLAWVAAYLDDYDTSSVQYLPLISK CCCHHHHHHHHCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA