| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is hslJ [C]
Identifier: 159897949
GI number: 159897949
Start: 1644154
End: 1644612
Strand: Direct
Name: hslJ [C]
Synonym: Haur_1424
Alternate gene names: 159897949
Gene position: 1644154-1644612 (Clockwise)
Preceding gene: 159897943
Following gene: 159897950
Centisome position: 25.91
GC content: 51.2
Gene sequence:
>459_bases ATGCGCCGCACGTTTACGATATTTGCTCTCTTAACCGTTTTGGCTGGCTGTGGTAGTGCGACTACGCCAACCGCTATGCC GACCAACGTGCCCACGGTTGATGTCGCCCAGCCTGGTGCTGCTGGCTTGGCTGGCTCAAGCTGGAATGTTTTGCAAATCA ATGGTCAACCAATTAAAGGCACGCAAGCCTTGCCCTTAACGTTTGAATTGGATGGTCGTGCTTCAGGCCATAGTGGTTGT AATGGCTATTCGGGCGAGGCCAACGTTGCTGGCGAGCAGTTGACCATCGGCCCTGTCATGTCAACCAAGATGGCCTGTGC TGAAAACGAATTGCAACAACAAGAAACCACCTTGTTCCAAGCGCTCGAAAAAGTAACCAGCTATACGATTACTGGCGATA AACTGAGTTTGCTTGATGCGAGTGGTACGGTTGTGGTCGAATTGGTGCAACAAGCCTAA
Upstream 100 bases:
>100_bases TGTGGCCTATTATAGCACAGCGGTATTAATTTCTTAGGGAACTTTTGGCCGAGTTTTAACGTTTTGGCTGTATAACAGAT ACTTTTTTGGAGGATACCCA
Downstream 100 bases:
>100_bases ATTGATGCCCTCACCCCCCAACCTTACAAGGGTAGGTTTTTAACAATGGTTGGGAGGGATTCGCCGTCGATATTCATACC CTGACCTCCTGACCCCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKGTQALPLTFELDGRASGHSGC NGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQALEKVTSYTITGDKLSLLDASGTVVVELVQQA
Sequences:
>Translated_152_residues MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKGTQALPLTFELDGRASGHSGC NGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQALEKVTSYTITGDKLSLLDASGTVVVELVQQA >Mature_152_residues MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKGTQALPLTFELDGRASGHSGC NGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQALEKVTSYTITGDKLSLLDASGTVVVELVQQA
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15717; Mature: 15717
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKG CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCC TQALPLTFELDGRASGHSGCNGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQ CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH ALEKVTSYTITGDKLSLLDASGTVVVELVQQA HHHHHHHEEECCCEEEEEECCCCEEEEEECCC >Mature Secondary Structure MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKG CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCC TQALPLTFELDGRASGHSGCNGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQ CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH ALEKVTSYTITGDKLSLLDASGTVVVELVQQA HHHHHHHEEECCCEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA