| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897934
Identifier: 159897934
GI number: 159897934
Start: 1624465
End: 1624863
Strand: Reverse
Name: 159897934
Synonym: Haur_1409
Alternate gene names: NA
Gene position: 1624863-1624465 (Counterclockwise)
Preceding gene: 159897935
Following gene: 159897925
Centisome position: 25.6
GC content: 48.62
Gene sequence:
>399_bases GTGTTCAAACGACTTTTATTTTGCTTATTGCTATTAACCAGCCTCGTTGCTTGTGGCGGCAATGGTGCGGGCCAAGTGCC TGCTCCGGTTGAAAAAACCGTTGATGGAGTGACCCTCAAACTCATCTCGGAAAGCCCATTGAGCCAAAACACCGACCAAA CCTGGGTGATTAATGTGACGCAAAATGGCCAACCGGTGGATAATGCCGATGTCTATTTAGATATCGATATGCCTTCGATG CCAATGGGCCAGAACAAACCGCTAGCTAAAGGCGAGGGTAACGGCAACTATCGAGCCCAAGGCATTTACACCATGGGCGG AGCATGGGCGGTGAGCGTTTTTGCTGAATTTGATGGCAAAGAATATCAGGCCAGCTTCGATTTCAACGTACCAGAATAA
Upstream 100 bases:
>100_bases CAGAGCCAACCGACAGCACCGCCCCTAGCGCCCCCACCAGAATTACTACGATTAAGTTAATTTCAATTCATTCTTGCTAT TTTTATAAGGAGTGTTCAGC
Downstream 100 bases:
>100_bases GACCTAGAGCTAGTCCTTTATCATTGGCGAAGGGCTAGCTCTACTCGTTTCATTCAGACTTGACAAATTCAGCAACTTCG GGCATCATTGGCGCTAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MFKRLLFCLLLLTSLVACGGNGAGQVPAPVEKTVDGVTLKLISESPLSQNTDQTWVINVTQNGQPVDNADVYLDIDMPSM PMGQNKPLAKGEGNGNYRAQGIYTMGGAWAVSVFAEFDGKEYQASFDFNVPE
Sequences:
>Translated_132_residues MFKRLLFCLLLLTSLVACGGNGAGQVPAPVEKTVDGVTLKLISESPLSQNTDQTWVINVTQNGQPVDNADVYLDIDMPSM PMGQNKPLAKGEGNGNYRAQGIYTMGGAWAVSVFAEFDGKEYQASFDFNVPE >Mature_132_residues MFKRLLFCLLLLTSLVACGGNGAGQVPAPVEKTVDGVTLKLISESPLSQNTDQTWVINVTQNGQPVDNADVYLDIDMPSM PMGQNKPLAKGEGNGNYRAQGIYTMGGAWAVSVFAEFDGKEYQASFDFNVPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14221; Mature: 14221
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRLLFCLLLLTSLVACGGNGAGQVPAPVEKTVDGVTLKLISESPLSQNTDQTWVINVT CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCEEEEEEE QNGQPVDNADVYLDIDMPSMPMGQNKPLAKGEGNGNYRAQGIYTMGGAWAVSVFAEFDGK CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCC EYQASFDFNVPE EEEEEECCCCCC >Mature Secondary Structure MFKRLLFCLLLLTSLVACGGNGAGQVPAPVEKTVDGVTLKLISESPLSQNTDQTWVINVT CHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCEEEEEEE QNGQPVDNADVYLDIDMPSMPMGQNKPLAKGEGNGNYRAQGIYTMGGAWAVSVFAEFDGK CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCC EYQASFDFNVPE EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA