| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897929
Identifier: 159897929
GI number: 159897929
Start: 1619652
End: 1620728
Strand: Direct
Name: 159897929
Synonym: Haur_1403
Alternate gene names: NA
Gene position: 1619652-1620728 (Clockwise)
Preceding gene: 159897928
Following gene: 159897930
Centisome position: 25.52
GC content: 54.78
Gene sequence:
>1077_bases ATGACAACCGGAAATGCATGGGTTGATGCGATTGCGCAGCTCCCAATCGAAGGCAATATTGTGCCGCCAGTGTGGTTTCA ACAGATTACATTCGCGAATGGGAAGCCGCATGCCTGTGCGGTCATCCTGCTTTCCGATATTGTCTATTGGTATCGCCCAA CGATTCTGCGCGATGAAACCACGGGCCTCGTGATTGGCAGCCGGAAGAAGTTTCGCGCGGATATGCTCCAGCGCAGTTAC GACAACTTTGCCGACCAATATGGGTTTACCAAAGCCCAGGTCAAAGCAGGGATTAATGCCTTAGTGGAGTTGGGGTTAAT CGTGCGCGAATTTCGCTCGGAAACGGTGAATGGGCAGCGCTTAACCAATCTGTTGTATGTTGCGCCGATTGCCCATGCGA TTGCCAAGATGAGCACACCCCTCTGTGATTCCATTGATACACCTCCCCCAATAGAATCGCAGACCTCCCCCAATAGAATG GCAGAGGTGGGTGATTCTAGTGGCACACCTCCCTCAACAGAATCGCAGACAAATACAAAGACTACCCAGAGACTACCCAA AGACTTCCCATCATCATCCGCTCCTGCGGCGCGTGCTGCCAATCGTGCGCGAACAACCCGCACGGCCACCCGCCACCGCG CATCTGGCGATGCGGATAAAAATAAACATCAACAATCGGCAACCTATCGGCTGTTACGCGATCGGCAAGTCTGGTCAGCC AGCAAGTTTGCCGAGGAGCCACTGGCTCTGATTCAAGCCTATCTTGATCACGTTGGCCCTGAGTATCCAGCGGCCCAAAT CGCCATTGACCTGAACGCTGGCGTGCATCAACGCCTTGGTCAACATCCTACCGCCGAGCCAACCCAACCCGCTGAACCCG TGCCCGATTGGCCAACCTGGTTACCCGCCGATCACGGCTTGCCGCCTGATATGGCTGCGTGGATGCGCGATGCCGTATGG GTGGCCGAGCGTGGCGAAATTGAAATCCCCAAGCATAACGATCGCTTTCGGCGGCGTTTCAGCTATTGGCTGACCCCGCT CGAAAGCCAGTTACGAGGATTGTATGCAACGATTTGA
Upstream 100 bases:
>100_bases TCACTGCGGCGCAAATGGCTGAGCGGGATGCGGTGTTTGATAACTAACTGGTCGTGTCTTTGAGCGCCTTACGGGGCGCT CGTCTGGTTAAAGGTGTGCT
Downstream 100 bases:
>100_bases TACCAGTATCCAAGCATCGGTAACGCCTGCTCCCGACATGCTGCCACCGGTTGTCCCATGGGAGCCGAATGAAACCTGTC CGTGTTGTAAAGGCGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Prophage; Replication Protein Phage
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTTGNAWVDAIAQLPIEGNIVPPVWFQQITFANGKPHACAVILLSDIVYWYRPTILRDETTGLVIGSRKKFRADMLQRSY DNFADQYGFTKAQVKAGINALVELGLIVREFRSETVNGQRLTNLLYVAPIAHAIAKMSTPLCDSIDTPPPIESQTSPNRM AEVGDSSGTPPSTESQTNTKTTQRLPKDFPSSSAPAARAANRARTTRTATRHRASGDADKNKHQQSATYRLLRDRQVWSA SKFAEEPLALIQAYLDHVGPEYPAAQIAIDLNAGVHQRLGQHPTAEPTQPAEPVPDWPTWLPADHGLPPDMAAWMRDAVW VAERGEIEIPKHNDRFRRRFSYWLTPLESQLRGLYATI
Sequences:
>Translated_358_residues MTTGNAWVDAIAQLPIEGNIVPPVWFQQITFANGKPHACAVILLSDIVYWYRPTILRDETTGLVIGSRKKFRADMLQRSY DNFADQYGFTKAQVKAGINALVELGLIVREFRSETVNGQRLTNLLYVAPIAHAIAKMSTPLCDSIDTPPPIESQTSPNRM AEVGDSSGTPPSTESQTNTKTTQRLPKDFPSSSAPAARAANRARTTRTATRHRASGDADKNKHQQSATYRLLRDRQVWSA SKFAEEPLALIQAYLDHVGPEYPAAQIAIDLNAGVHQRLGQHPTAEPTQPAEPVPDWPTWLPADHGLPPDMAAWMRDAVW VAERGEIEIPKHNDRFRRRFSYWLTPLESQLRGLYATI >Mature_357_residues TTGNAWVDAIAQLPIEGNIVPPVWFQQITFANGKPHACAVILLSDIVYWYRPTILRDETTGLVIGSRKKFRADMLQRSYD NFADQYGFTKAQVKAGINALVELGLIVREFRSETVNGQRLTNLLYVAPIAHAIAKMSTPLCDSIDTPPPIESQTSPNRMA EVGDSSGTPPSTESQTNTKTTQRLPKDFPSSSAPAARAANRARTTRTATRHRASGDADKNKHQQSATYRLLRDRQVWSAS KFAEEPLALIQAYLDHVGPEYPAAQIAIDLNAGVHQRLGQHPTAEPTQPAEPVPDWPTWLPADHGLPPDMAAWMRDAVWV AERGEIEIPKHNDRFRRRFSYWLTPLESQLRGLYATI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39883; Mature: 39752
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGNAWVDAIAQLPIEGNIVPPVWFQQITFANGKPHACAVILLSDIVYWYRPTILRDET CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCC TGLVIGSRKKFRADMLQRSYDNFADQYGFTKAQVKAGINALVELGLIVREFRSETVNGQR CEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LTNLLYVAPIAHAIAKMSTPLCDSIDTPPPIESQTSPNRMAEVGDSSGTPPSTESQTNTK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH TTQRLPKDFPSSSAPAARAANRARTTRTATRHRASGDADKNKHQQSATYRLLRDRQVWSA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKFAEEPLALIQAYLDHVGPEYPAAQIAIDLNAGVHQRLGQHPTAEPTQPAEPVPDWPTW HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC LPADHGLPPDMAAWMRDAVWVAERGEIEIPKHNDRFRRRFSYWLTPLESQLRGLYATI CCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure TTGNAWVDAIAQLPIEGNIVPPVWFQQITFANGKPHACAVILLSDIVYWYRPTILRDET CCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCC TGLVIGSRKKFRADMLQRSYDNFADQYGFTKAQVKAGINALVELGLIVREFRSETVNGQR CEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LTNLLYVAPIAHAIAKMSTPLCDSIDTPPPIESQTSPNRMAEVGDSSGTPPSTESQTNTK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH TTQRLPKDFPSSSAPAARAANRARTTRTATRHRASGDADKNKHQQSATYRLLRDRQVWSA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SKFAEEPLALIQAYLDHVGPEYPAAQIAIDLNAGVHQRLGQHPTAEPTQPAEPVPDWPTW HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC LPADHGLPPDMAAWMRDAVWVAERGEIEIPKHNDRFRRRFSYWLTPLESQLRGLYATI CCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA