| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is dnaC [C]
Identifier: 159897930
GI number: 159897930
Start: 1620715
End: 1621518
Strand: Direct
Name: dnaC [C]
Synonym: Haur_1404
Alternate gene names: 159897930
Gene position: 1620715-1621518 (Clockwise)
Preceding gene: 159897929
Following gene: 159897931
Centisome position: 25.54
GC content: 56.47
Gene sequence:
>804_bases ATGCAACGATTTGATACCAGTATCCAAGCATCGGTAACGCCTGCTCCCGACATGCTGCCACCGGTTGTCCCATGGGAGCC GAATGAAACCTGTCCGTGTTGTAAAGGCGCTGGCTATTTTGTCTACGATGTGGCGGTTGACCATCACATGTTTGGCAAAC TGCAAGCCTGTGGCTGTCTGCAACAACGCCAAATTGAGCGCCGTCGCAGCGAACTGCATGCCAAGAGCGGTCTTGCGCCG TTTCGCGGCAAAACCTTTGCCAGCTTCGATCGCACGATTGCAGGCGTTGATCACGCCGTTGGTGCGGCCCAAGCCTTTGC CGACAACCCCGACGGTTTTTTGACCTTGGTCGGCAACCCGGGCTGTGGCAAAACCCACTTAGCCCAAGCGATCGGCAATG CGCTGCAAGCCCGTGGCTTCGAAGTCGTTTGGTCAACGGCTCCCGATGCCTTGCGCCTGCTGCGCTCGACCTTCGATCAA ACGAGCAACAAGCCCAAGAATAGCTTCGATGAACAATTCGAACTCTTCCGCAAAGCCCCAATGCTGCTGCTCGATGACCT TGGAGCCGAGAATGCCACCGATTGGGGCAAAGAAACCTTGTTCCAGTTGCTCAACGAGCGCTATGAATACCAACGCCCCA CCGTGATCACGAGCAACCTGCACCCGAACACCGCTGAAGCGAATCGCCGCTTTGGCATGCGTTTATGCAGTCGTTTGCTC GATGCGGTTCAAGGTCAGTTGGTCGTGGTGCAAGCGGCGGATTATCGACGACGCGATCCGATGGATCGATTGGGGGCTGC CTAA
Upstream 100 bases:
>100_bases GCCGAGCGTGGCGAAATTGAAATCCCCAAGCATAACGATCGCTTTCGGCGGCGTTTCAGCTATTGGCTGACCCCGCTCGA AAGCCAGTTACGAGGATTGT
Downstream 100 bases:
>100_bases TGCGCCGCAAACCCGTGAGTTTTACCACCGTGCGGTTGGTGTGGGGTGCGGTGAGCCGCCGACCACTGGCAACGGTGCGT GATTTAGCCGATGAACTGCG
Product: IstB ATP binding domain-containing protein
Products: NA
Alternate protein names: AAA ATPase; DNA Replication Protein; Replication Protein; Aaa ATPase; Phage DNA Replication Protein; Prophage; Chromosome Replication Initiation Protein; Primosomal Protein DNAI
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MQRFDTSIQASVTPAPDMLPPVVPWEPNETCPCCKGAGYFVYDVAVDHHMFGKLQACGCLQQRQIERRRSELHAKSGLAP FRGKTFASFDRTIAGVDHAVGAAQAFADNPDGFLTLVGNPGCGKTHLAQAIGNALQARGFEVVWSTAPDALRLLRSTFDQ TSNKPKNSFDEQFELFRKAPMLLLDDLGAENATDWGKETLFQLLNERYEYQRPTVITSNLHPNTAEANRRFGMRLCSRLL DAVQGQLVVVQAADYRRRDPMDRLGAA
Sequences:
>Translated_267_residues MQRFDTSIQASVTPAPDMLPPVVPWEPNETCPCCKGAGYFVYDVAVDHHMFGKLQACGCLQQRQIERRRSELHAKSGLAP FRGKTFASFDRTIAGVDHAVGAAQAFADNPDGFLTLVGNPGCGKTHLAQAIGNALQARGFEVVWSTAPDALRLLRSTFDQ TSNKPKNSFDEQFELFRKAPMLLLDDLGAENATDWGKETLFQLLNERYEYQRPTVITSNLHPNTAEANRRFGMRLCSRLL DAVQGQLVVVQAADYRRRDPMDRLGAA >Mature_267_residues MQRFDTSIQASVTPAPDMLPPVVPWEPNETCPCCKGAGYFVYDVAVDHHMFGKLQACGCLQQRQIERRRSELHAKSGLAP FRGKTFASFDRTIAGVDHAVGAAQAFADNPDGFLTLVGNPGCGKTHLAQAIGNALQARGFEVVWSTAPDALRLLRSTFDQ TSNKPKNSFDEQFELFRKAPMLLLDDLGAENATDWGKETLFQLLNERYEYQRPTVITSNLHPNTAEANRRFGMRLCSRLL DAVQGQLVVVQAADYRRRDPMDRLGAA
Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790823, Length=169, Percent_Identity=25.4437869822485, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29631; Mature: 29631
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFDTSIQASVTPAPDMLPPVVPWEPNETCPCCKGAGYFVYDVAVDHHMFGKLQACGCL CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHH QQRQIERRRSELHAKSGLAPFRGKTFASFDRTIAGVDHAVGAAQAFADNPDGFLTLVGNP HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC GCGKTHLAQAIGNALQARGFEVVWSTAPDALRLLRSTFDQTSNKPKNSFDEQFELFRKAP CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCH MLLLDDLGAENATDWGKETLFQLLNERYEYQRPTVITSNLHPNTAEANRRFGMRLCSRLL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHH DAVQGQLVVVQAADYRRRDPMDRLGAA HHHCCCEEEEECCCCHHCCCHHHHCCC >Mature Secondary Structure MQRFDTSIQASVTPAPDMLPPVVPWEPNETCPCCKGAGYFVYDVAVDHHMFGKLQACGCL CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHH QQRQIERRRSELHAKSGLAPFRGKTFASFDRTIAGVDHAVGAAQAFADNPDGFLTLVGNP HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC GCGKTHLAQAIGNALQARGFEVVWSTAPDALRLLRSTFDQTSNKPKNSFDEQFELFRKAP CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCH MLLLDDLGAENATDWGKETLFQLLNERYEYQRPTVITSNLHPNTAEANRRFGMRLCSRLL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHH DAVQGQLVVVQAADYRRRDPMDRLGAA HHHCCCEEEEECCCCHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA