| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897904
Identifier: 159897904
GI number: 159897904
Start: 1592981
End: 1594069
Strand: Reverse
Name: 159897904
Synonym: Haur_1378
Alternate gene names: NA
Gene position: 1594069-1592981 (Counterclockwise)
Preceding gene: 159897905
Following gene: 159897903
Centisome position: 25.12
GC content: 56.84
Gene sequence:
>1089_bases ATGGCTGATATTGCCAGTTTAATCAATCAGGCGCGAGCGGACGGAACCCTGATCCGGCTTGCTCGCAATGTCTTAGCTCA GTTCGGGCGACCACAACGGCGCTACCTTGGCGCGGAGTTACTGCCCGAGCGCATGGTCGAAGAAAACCAATATACCGAGG ATTCCATTCGCTACCGCACCGTGGTGGCCAATGGGGGAACGCGTTACGGCCCCGCCCAAAAGAAGGGTGGCGACCTGATC GGGACGTTCGATGTCAAGTTGGCCAACAGTGATATTGCCCGCGAGCTGAGTGGCCGCGACTACGATATCCTGTTGCGACA CCTTGAACGCAATGCCTCGATGGAAGCCATTGCTGCGCTCACGAGCTGGGCCGAAACTACGCTCAATTTGTCCTTGATCG AAACCAACGAAGCATGGCGCTGGCAAGCCATTGTCGATGCCAGCGTGATCATTGAAGGCGATAACGCCTTTCGGAAACCC GTAGCCTTGACCAATCCCGCAGGCCACCGCGTCAACGTGGCGGGCGATTGGGCTGACGATGCCTACGACCCCTTTGAAGA TATTTACGCCATGGCTGATTTGCTGCAAAGCAAAGGCTACACCGTGGGCCGGATCATTACGGGCACGCCTGTGCTGACCA AAATGGCGCGGAATGCCAAGGTTGCATCGCGCACCAGTCACTTTGTGACCAACAACGGTGGGTCTTTAGAACTTATGGCG GGTCGTGCCAGCCTGATGGGGGTCAATATGGCCTTGCAAATGGATGGCTTACCCCCGATTGAGCGCTATGACTTGCGTTA TCGCACCCAAACGGGCGATACCCGCTTTCTGCACGCCCAAGCCTTCGTGATGGTGGCCCTCACAGGCCGCAACGAAGAGT TGGATGTGCCTGATGCCGAACAATCGTTGATTACCGATACCTTGGGCTATACCGCCGTTGGGCGAGCCGCAGGCCAAAGC GAATCGGGCCGCGTGATTCATACCGAGTTCAAGTCGAACAAGCCACCGCGCATTGAAGGCGAAGCATGGCAGACCAGCTT CCCCGTCATTACCGAGCCAGAAGCGATTGGCGTGTTGAAGAACATCTAG
Upstream 100 bases:
>100_bases CTTTGTGCGCAGCCACTATCAATGCACGGTCGGCAGAGCCTAAGCAGGGCGAAGGCATCGTTATTCATTCAATCATCAAT CTGTTTAGGAGTTTGTTGGT
Downstream 100 bases:
>100_bases GGGGTAAGGAGAAGGTTGCAATCATTCAATTGATTCAAAGGAGTGTTTTCATGCCAAAAGTGCAAGTCACATTAACCGAT TCATGGATGTATTTAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MADIASLINQARADGTLIRLARNVLAQFGRPQRRYLGAELLPERMVEENQYTEDSIRYRTVVANGGTRYGPAQKKGGDLI GTFDVKLANSDIARELSGRDYDILLRHLERNASMEAIAALTSWAETTLNLSLIETNEAWRWQAIVDASVIIEGDNAFRKP VALTNPAGHRVNVAGDWADDAYDPFEDIYAMADLLQSKGYTVGRIITGTPVLTKMARNAKVASRTSHFVTNNGGSLELMA GRASLMGVNMALQMDGLPPIERYDLRYRTQTGDTRFLHAQAFVMVALTGRNEELDVPDAEQSLITDTLGYTAVGRAAGQS ESGRVIHTEFKSNKPPRIEGEAWQTSFPVITEPEAIGVLKNI
Sequences:
>Translated_362_residues MADIASLINQARADGTLIRLARNVLAQFGRPQRRYLGAELLPERMVEENQYTEDSIRYRTVVANGGTRYGPAQKKGGDLI GTFDVKLANSDIARELSGRDYDILLRHLERNASMEAIAALTSWAETTLNLSLIETNEAWRWQAIVDASVIIEGDNAFRKP VALTNPAGHRVNVAGDWADDAYDPFEDIYAMADLLQSKGYTVGRIITGTPVLTKMARNAKVASRTSHFVTNNGGSLELMA GRASLMGVNMALQMDGLPPIERYDLRYRTQTGDTRFLHAQAFVMVALTGRNEELDVPDAEQSLITDTLGYTAVGRAAGQS ESGRVIHTEFKSNKPPRIEGEAWQTSFPVITEPEAIGVLKNI >Mature_361_residues ADIASLINQARADGTLIRLARNVLAQFGRPQRRYLGAELLPERMVEENQYTEDSIRYRTVVANGGTRYGPAQKKGGDLIG TFDVKLANSDIARELSGRDYDILLRHLERNASMEAIAALTSWAETTLNLSLIETNEAWRWQAIVDASVIIEGDNAFRKPV ALTNPAGHRVNVAGDWADDAYDPFEDIYAMADLLQSKGYTVGRIITGTPVLTKMARNAKVASRTSHFVTNNGGSLELMAG RASLMGVNMALQMDGLPPIERYDLRYRTQTGDTRFLHAQAFVMVALTGRNEELDVPDAEQSLITDTLGYTAVGRAAGQSE SGRVIHTEFKSNKPPRIEGEAWQTSFPVITEPEAIGVLKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39828; Mature: 39697
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIASLINQARADGTLIRLARNVLAQFGRPQRRYLGAELLPERMVEENQYTEDSIRYRT CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCCEEEEE VVANGGTRYGPAQKKGGDLIGTFDVKLANSDIARELSGRDYDILLRHLERNASMEAIAAL EEECCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH TSWAETTLNLSLIETNEAWRWQAIVDASVIIEGDNAFRKPVALTNPAGHRVNVAGDWADD HHHHHHEEEEEEEECCCCEEEEEEEEEEEEEECCCCHHCCEEEECCCCCEEEEECCCCCC AYDPFEDIYAMADLLQSKGYTVGRIITGTPVLTKMARNAKVASRTSHFVTNNGGSLELMA CCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCHHHHCCCEEEECCCCEEEEEE GRASLMGVNMALQMDGLPPIERYDLRYRTQTGDTRFLHAQAFVMVALTGRNEELDVPDAE CCCEEEEEEEEEEECCCCCHHHCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCH QSLITDTLGYTAVGRAAGQSESGRVIHTEFKSNKPPRIEGEAWQTSFPVITEPEAIGVLK HHHHHHHHCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHH NI CC >Mature Secondary Structure ADIASLINQARADGTLIRLARNVLAQFGRPQRRYLGAELLPERMVEENQYTEDSIRYRT CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCCEEEEE VVANGGTRYGPAQKKGGDLIGTFDVKLANSDIARELSGRDYDILLRHLERNASMEAIAAL EEECCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH TSWAETTLNLSLIETNEAWRWQAIVDASVIIEGDNAFRKPVALTNPAGHRVNVAGDWADD HHHHHHEEEEEEEECCCCEEEEEEEEEEEEEECCCCHHCCEEEECCCCCEEEEECCCCCC AYDPFEDIYAMADLLQSKGYTVGRIITGTPVLTKMARNAKVASRTSHFVTNNGGSLELMA CCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCHHHHCCCEEEECCCCEEEEEE GRASLMGVNMALQMDGLPPIERYDLRYRTQTGDTRFLHAQAFVMVALTGRNEELDVPDAE CCCEEEEEEEEEEECCCCCHHHCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCH QSLITDTLGYTAVGRAAGQSESGRVIHTEFKSNKPPRIEGEAWQTSFPVITEPEAIGVLK HHHHHHHHCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHH NI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA