| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897905
Identifier: 159897905
GI number: 159897905
Start: 1594127
End: 1594747
Strand: Reverse
Name: 159897905
Synonym: Haur_1379
Alternate gene names: NA
Gene position: 1594747-1594127 (Counterclockwise)
Preceding gene: 159897906
Following gene: 159897904
Centisome position: 25.13
GC content: 56.68
Gene sequence:
>621_bases ATGGCTGGAGTAATCGGTACCGTTAATCAACTTACCAGCCCAATTTGGGCAGGCGATTTCTTAGACCGCGAGCACTTAAT GCCCGGCGGAGCCACGGTTGATGCAAGCCAGTTCTTGGCAACCGATGGCGCAATTGTCACCTTGTCGGCCAATGCGTTGG TCAGTGCGACCAGTATCGCCGTCACCGCCTTGGTGAATCCTATTCCGGCAAATACGTTGCTGCGCTTTGCCGCTGGCAAG TATGCCTATTCGACCGCTGCCGCTGCTGCTGGCGCAACCAGTATTGCCGTTGAAGCGTTGCCCGTGGCCCTCACGAGTGG CGATAAAGCGACCTACAAGGGCAGTGGTACCAAGCCCGTCACCATCGTCTCGGGCACGCTGATTGGTCGCACCTGGGCCG AGCGCGATGCCGGCACAGCCTTTGGTCCGGCTGCTGATGCTGATGAAGAGATCTATTTGCTGGCGTTCGATATCAGCGAT GCCAGCAGAAACAACGATGCCGATTTGTATCGCTACAACAGCATCGTGAAAGAAACCTTTGTACCTGGCTGGGCAGGGTT GAGTAGCACGCTCAAGGCCTTTGTGCGCAGCCACTATCAATGCACGGTCGGCAGAGCCTAA
Upstream 100 bases:
>100_bases CGGGCTTTGTCCGCCAAGGTGCAGGCAATCCCAAGAACGACGACCCCATCACCACTCACAATCAACGGATGGGCTATAGC CTTCCGAAGCGAGGTTAATC
Downstream 100 bases:
>100_bases GCAGGGCGAAGGCATCGTTATTCATTCAATCATCAATCTGTTTAGGAGTTTGTTGGTATGGCTGATATTGCCAGTTTAAT CAATCAGGCGCGAGCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAGVIGTVNQLTSPIWAGDFLDREHLMPGGATVDASQFLATDGAIVTLSANALVSATSIAVTALVNPIPANTLLRFAAGK YAYSTAAAAAGATSIAVEALPVALTSGDKATYKGSGTKPVTIVSGTLIGRTWAERDAGTAFGPAADADEEIYLLAFDISD ASRNNDADLYRYNSIVKETFVPGWAGLSSTLKAFVRSHYQCTVGRA
Sequences:
>Translated_206_residues MAGVIGTVNQLTSPIWAGDFLDREHLMPGGATVDASQFLATDGAIVTLSANALVSATSIAVTALVNPIPANTLLRFAAGK YAYSTAAAAAGATSIAVEALPVALTSGDKATYKGSGTKPVTIVSGTLIGRTWAERDAGTAFGPAADADEEIYLLAFDISD ASRNNDADLYRYNSIVKETFVPGWAGLSSTLKAFVRSHYQCTVGRA >Mature_205_residues AGVIGTVNQLTSPIWAGDFLDREHLMPGGATVDASQFLATDGAIVTLSANALVSATSIAVTALVNPIPANTLLRFAAGKY AYSTAAAAAGATSIAVEALPVALTSGDKATYKGSGTKPVTIVSGTLIGRTWAERDAGTAFGPAADADEEIYLLAFDISDA SRNNDADLYRYNSIVKETFVPGWAGLSSTLKAFVRSHYQCTVGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21251; Mature: 21120
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVIGTVNQLTSPIWAGDFLDREHLMPGGATVDASQFLATDGAIVTLSANALVSATSIA CCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCEECHHHHHCCCCEEEEEECCCCHHHHHHE VTALVNPIPANTLLRFAAGKYAYSTAAAAAGATSIAVEALPVALTSGDKATYKGSGTKPV EEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHEEEEEEEEEEECCCCEEECCCCCCCE TIVSGTLIGRTWAERDAGTAFGPAADADEEIYLLAFDISDASRNNDADLYRYNSIVKETF EEEECCEECCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHC VPGWAGLSSTLKAFVRSHYQCTVGRA CCCCCCHHHHHHHHHHCCCEEEECCC >Mature Secondary Structure AGVIGTVNQLTSPIWAGDFLDREHLMPGGATVDASQFLATDGAIVTLSANALVSATSIA CCCCCCHHHHCCCCCCCCCCCHHHCCCCCCEECHHHHHCCCCEEEEEECCCCHHHHHHE VTALVNPIPANTLLRFAAGKYAYSTAAAAAGATSIAVEALPVALTSGDKATYKGSGTKPV EEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHEEEEEEEEEEECCCCEEECCCCCCCE TIVSGTLIGRTWAERDAGTAFGPAADADEEIYLLAFDISDASRNNDADLYRYNSIVKETF EEEECCEECCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHC VPGWAGLSSTLKAFVRSHYQCTVGRA CCCCCCHHHHHHHHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA