| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897855
Identifier: 159897855
GI number: 159897855
Start: 1540414
End: 1541124
Strand: Reverse
Name: 159897855
Synonym: Haur_1329
Alternate gene names: NA
Gene position: 1541124-1540414 (Counterclockwise)
Preceding gene: 159897856
Following gene: 159897854
Centisome position: 24.28
GC content: 50.77
Gene sequence:
>711_bases ATGGCCAAGCAAGAAACAGTACAACTTATCATTGGCCACCGCTACGCCAACGAATCAGATAAGGCCGTGGTGGCCTGCAA CGATTATCTGCGCATGGGTATTAACCGATCACTCAAGCGTTTATCGGTACATGACGGTGATTTGTCGGGTAAAAAACCTA ATTTAAGAAGTCTTGAACGGTGGTCAACCGAATTCAATTGGCAGGATCGTGCCAAGGCCTACGATGCGCAGCTGGAGCAA GCAAAAAATGATGCGCTAGCTGCACGTCGCCGCGAGGTGTTTGAGGAAGGCCTCGCGCTCGACTTTGAGCGGGTGATCAA GCTCAAGGAGTTAGCGAAGGATTTAGAAGAACAAATTAAAGAGATTGACGACGATCACCCGCACAAGCGACCGAATGTAT GGGTGCGCGATGTCAAACAAATTGGGGCAGGCGAGTATGCCGAGCAGGTTGAGATTTATCGGTATAACTCGGCCCTGATT AGTGATTATCGCGGGGTGCTCGATGACTTGGCCAAGGAAACCGGAGGCCGCAAACAGAAGCAAGAGCATGTGCATAAAGG CGATCGGAGCGCACCGATTGTGATTGATAGCCCAGCGTTGGAACAGGCTGCCAAGGAATTGCAGCAGTGGCGTGAGGAAC AATGTCAAATGCTGTTGAATTGGCGAAATGCCATGCCGACCCTGCCTACTTCACCCACCACTTTGGATTAA
Upstream 100 bases:
>100_bases AGTGTTGTCTATGGCTTTTTGTTCTATATCAATCTGGATCTGTGGTGCTTTTTTCGTGACCTTGATCAAGATCTAACCAG CGAGTACAAGGCGGCGAGCA
Downstream 100 bases:
>100_bases TCGACGATGCCCAAGGGTTGGGGGATGGGAGATGCACAATGCCCTTTACGCTCTGGCCTGCCCAAGTACAGGTACTCGGG ACGCTCTTAATCCAGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAKQETVQLIIGHRYANESDKAVVACNDYLRMGINRSLKRLSVHDGDLSGKKPNLRSLERWSTEFNWQDRAKAYDAQLEQ AKNDALAARRREVFEEGLALDFERVIKLKELAKDLEEQIKEIDDDHPHKRPNVWVRDVKQIGAGEYAEQVEIYRYNSALI SDYRGVLDDLAKETGGRKQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCQMLLNWRNAMPTLPTSPTTLD
Sequences:
>Translated_236_residues MAKQETVQLIIGHRYANESDKAVVACNDYLRMGINRSLKRLSVHDGDLSGKKPNLRSLERWSTEFNWQDRAKAYDAQLEQ AKNDALAARRREVFEEGLALDFERVIKLKELAKDLEEQIKEIDDDHPHKRPNVWVRDVKQIGAGEYAEQVEIYRYNSALI SDYRGVLDDLAKETGGRKQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCQMLLNWRNAMPTLPTSPTTLD >Mature_235_residues AKQETVQLIIGHRYANESDKAVVACNDYLRMGINRSLKRLSVHDGDLSGKKPNLRSLERWSTEFNWQDRAKAYDAQLEQA KNDALAARRREVFEEGLALDFERVIKLKELAKDLEEQIKEIDDDHPHKRPNVWVRDVKQIGAGEYAEQVEIYRYNSALIS DYRGVLDDLAKETGGRKQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCQMLLNWRNAMPTLPTSPTTLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27222; Mature: 27091
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQETVQLIIGHRYANESDKAVVACNDYLRMGINRSLKRLSVHDGDLSGKKPNLRSLER CCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH WSTEFNWQDRAKAYDAQLEQAKNDALAARRREVFEEGLALDFERVIKLKELAKDLEEQIK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EIDDDHPHKRPNVWVRDVKQIGAGEYAEQVEIYRYNSALISDYRGVLDDLAKETGGRKQK HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCQMLLNWRNAMPTLPTSPTTLD HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AKQETVQLIIGHRYANESDKAVVACNDYLRMGINRSLKRLSVHDGDLSGKKPNLRSLER CCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH WSTEFNWQDRAKAYDAQLEQAKNDALAARRREVFEEGLALDFERVIKLKELAKDLEEQIK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EIDDDHPHKRPNVWVRDVKQIGAGEYAEQVEIYRYNSALISDYRGVLDDLAKETGGRKQK HCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCQMLLNWRNAMPTLPTSPTTLD HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA