| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897851
Identifier: 159897851
GI number: 159897851
Start: 1536575
End: 1537036
Strand: Direct
Name: 159897851
Synonym: Haur_1325
Alternate gene names: NA
Gene position: 1536575-1537036 (Clockwise)
Preceding gene: 159897849
Following gene: 159897853
Centisome position: 24.21
GC content: 48.7
Gene sequence:
>462_bases ATGCAAGCGTTTGATATTGCCAACGCAGGCAATTTTCTCGATGGGGGCATGAATGCCGTTCGCATAGCAATGAATGCGGC AAAAGCAGGAAAAACGTATGCATGTATTCAGTATTTTCACAACGAAACCGTAACCTACTGTATTCCTGAGTCGAGCGAAT CCGTTGAACACTTGATTGCGCTGGTCGATACGATGGTTGTGGCCGACCCTGGTATCAAAACGGCTATGGTGATGAATCCA CAATCGCATATGCTTTGGATGGTTGATCGAAATACGCACCATGGGTATCTCATGGAAGAATCAATCCTACAATTGTGCGC TGGCTATATCTGCTGGGAATGTGGCCATGGCCAAGCAACACCCTTCAATCGCTGCCTCATGTGCACCATGGATAATACTT GCCAGCCTTCGCCGCTGCGGTGGGTGCACACCTATCGCGATGATCGCGCAGCGTTTCAATAA
Upstream 100 bases:
>100_bases TCAAAAAAGCCGCTGAATGGGGACTCTCCACGCACCAAAGAACCAATTTATAAAATCGTCTGTTGGTTGAAGGATCGCAA TCGATGGTGGAAAGGCATGT
Downstream 100 bases:
>100_bases AACACCTATTAGCCTAACGGCTATGTCAATAGCTCTAGGAACGTCCCTATTAAAGAGTGTTGGCCATCCTAAATGGCCTC GTAGCCCACTCTGGGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQAFDIANAGNFLDGGMNAVRIAMNAAKAGKTYACIQYFHNETVTYCIPESSESVEHLIALVDTMVVADPGIKTAMVMNP QSHMLWMVDRNTHHGYLMEESILQLCAGYICWECGHGQATPFNRCLMCTMDNTCQPSPLRWVHTYRDDRAAFQ
Sequences:
>Translated_153_residues MQAFDIANAGNFLDGGMNAVRIAMNAAKAGKTYACIQYFHNETVTYCIPESSESVEHLIALVDTMVVADPGIKTAMVMNP QSHMLWMVDRNTHHGYLMEESILQLCAGYICWECGHGQATPFNRCLMCTMDNTCQPSPLRWVHTYRDDRAAFQ >Mature_153_residues MQAFDIANAGNFLDGGMNAVRIAMNAAKAGKTYACIQYFHNETVTYCIPESSESVEHLIALVDTMVVADPGIKTAMVMNP QSHMLWMVDRNTHHGYLMEESILQLCAGYICWECGHGQATPFNRCLMCTMDNTCQPSPLRWVHTYRDDRAAFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17173; Mature: 17173
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 12.4 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 12.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFDIANAGNFLDGGMNAVRIAMNAAKAGKTYACIQYFHNETVTYCIPESSESVEHLIA CCCCCCCCCCCCCCCCCHHEEEEHHHHCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHH LVDTMVVADPGIKTAMVMNPQSHMLWMVDRNTHHGYLMEESILQLCAGYICWECGHGQAT HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHEEECCCCCCC PFNRCLMCTMDNTCQPSPLRWVHTYRDDRAAFQ CCCEEEEEEECCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MQAFDIANAGNFLDGGMNAVRIAMNAAKAGKTYACIQYFHNETVTYCIPESSESVEHLIA CCCCCCCCCCCCCCCCCHHEEEEHHHHCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHH LVDTMVVADPGIKTAMVMNPQSHMLWMVDRNTHHGYLMEESILQLCAGYICWECGHGQAT HHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHEEECCCCCCC PFNRCLMCTMDNTCQPSPLRWVHTYRDDRAAFQ CCCEEEEEEECCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA