Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897849

Identifier: 159897849

GI number: 159897849

Start: 1534208

End: 1534648

Strand: Direct

Name: 159897849

Synonym: Haur_1323

Alternate gene names: NA

Gene position: 1534208-1534648 (Clockwise)

Preceding gene: 159897847

Following gene: 159897851

Centisome position: 24.17

GC content: 50.57

Gene sequence:

>441_bases
ATGCGTGCTTGGATCTGTCTCGCGGTGATGATCGTATTAACGGGCTGTGGTGGAGCGGCCACGCCCACGGTTTTTCCAAC
TAACACACCCATGGCCATGGACGAGCCGCCATTGTTTACCCCACCATCGGCCAAGCCGTATGCTGGTGGTGATGAACAAA
TTGATGTTTTTCTCGCTGCACTCAAAAACGTTGATACGGTTGGCACGGTCACAGACCAAGCGTTTTATCGCGTTACGGAA
TCAACCGTTGAAGTTTTTCAATTTTATCGCGATAGCTATGCATCGGATACGATCGAGGGTGGACCACCACAGCCTAGTGC
TACGACGCTCATCATCTTTATCAAACCAAGGAGTGTGGATTACCAGATCATGGTTACCTATGTTCGTCTCGGGGCTATAG
GCCACCCAGGTGGGTTATTAGGAGTAACCGTGACTCGGTAA

Upstream 100 bases:

>100_bases
GTGCGAACCCGTTATGCCATGGTATGGCACTCATCGTCTACCCCATCGCCTTGGGGGTTGACCAACGAGGGATGGGAGAA
TTCTTGTTAAGGAGAAGCTT

Downstream 100 bases:

>100_bases
ATAACTAGATCGCACTTGGAAAATTCCCAAGTGCGCTTCTTTTTTAGCCCTGCGCCAACCAGAGATCGAGTTGCTTAATT
GGTGCTTCGGGGGTAACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MRAWICLAVMIVLTGCGGAATPTVFPTNTPMAMDEPPLFTPPSAKPYAGGDEQIDVFLAALKNVDTVGTVTDQAFYRVTE
STVEVFQFYRDSYASDTIEGGPPQPSATTLIIFIKPRSVDYQIMVTYVRLGAIGHPGGLLGVTVTR

Sequences:

>Translated_146_residues
MRAWICLAVMIVLTGCGGAATPTVFPTNTPMAMDEPPLFTPPSAKPYAGGDEQIDVFLAALKNVDTVGTVTDQAFYRVTE
STVEVFQFYRDSYASDTIEGGPPQPSATTLIIFIKPRSVDYQIMVTYVRLGAIGHPGGLLGVTVTR
>Mature_146_residues
MRAWICLAVMIVLTGCGGAATPTVFPTNTPMAMDEPPLFTPPSAKPYAGGDEQIDVFLAALKNVDTVGTVTDQAFYRVTE
STVEVFQFYRDSYASDTIEGGPPQPSATTLIIFIKPRSVDYQIMVTYVRLGAIGHPGGLLGVTVTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15663; Mature: 15663

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAWICLAVMIVLTGCGGAATPTVFPTNTPMAMDEPPLFTPPSAKPYAGGDEQIDVFLAA
CCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LKNVDTVGTVTDQAFYRVTESTVEVFQFYRDSYASDTIEGGPPQPSATTLIIFIKPRSVD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCC
YQIMVTYVRLGAIGHPGGLLGVTVTR
CEEEEEEEHHCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRAWICLAVMIVLTGCGGAATPTVFPTNTPMAMDEPPLFTPPSAKPYAGGDEQIDVFLAA
CCHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LKNVDTVGTVTDQAFYRVTESTVEVFQFYRDSYASDTIEGGPPQPSATTLIIFIKPRSVD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCC
YQIMVTYVRLGAIGHPGGLLGVTVTR
CEEEEEEEHHCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA