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The map label for this gene is dcd

Identifier: 159897843

GI number: 159897843

Start: 1523497

End: 1524051

Strand: Reverse

Name: dcd

Synonym: Haur_1314

Alternate gene names: 159897843

Gene position: 1524051-1523497 (Counterclockwise)

Preceding gene: 159897844

Following gene: 159897842

Centisome position: 24.01

GC content: 47.57

Gene sequence:

>555_bases
ATGTCAATTAAAGCTGATCGCTGGATTAAGCGCATGGCCCAAGAGCATGGCATGATCGAGCCATTTGTTGATGGTCAAGT
GCGCGGTGGAGTCGTTTCATATGGCTTATCGTCCTATGGCTACGATATTCGAATTGCTGATGAATTTAAAATTTTCACCA
ATGTCAATTCGGCGATTATCGACCCCAAAAACTTCGACCCACGCTCGTTTGTCGATGTCAAAGCTGACGTTTGTATCATT
CCACCAAACTCGTTTGTACTCTGCCGCACGATCGAATACTTCCGCATTCCGCGCAATGTGCTCTGTGTTTGTGTTGGCAA
ATCGACCTATGCAAGATGTGGTCTGATCGCGAATGTAACGCCCTTCGAGCCAGGTTGGGAAGGCTATGTGACAATCGAAA
TTAGCAATACAACGCCATTGCCTGCCAAAATCTACGCCAACGAAGGCATTGCCCAAGTGCTGTTTTTCGAGGGCGATGAG
TTGCCAGACGTGGCCTATGACGATCGTTCGGGCAAATATCAAGGCCAAACTGGCGTGACTTTGCCACGAATTTAA

Upstream 100 bases:

>100_bases
AACGCCGACCGCTACGCCTAGCCCTACGCCAACATTAACACCCGAACCAAGCCCAACCCTTGATCCGAATGCGCCCACGG
CGACACCATAAGGAGTTTGT

Downstream 100 bases:

>100_bases
TCATTAATTTGGCCATTTTAATAAATCAGCATACAATACAAACAACCACCATGTTCGTGGTAGCGAGGAAGTGAATACTT
TATGCTGGTAACAGGTGTTG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSIKADRWIKRMAQEHGMIEPFVDGQVRGGVVSYGLSSYGYDIRIADEFKIFTNVNSAIIDPKNFDPRSFVDVKADVCII
PPNSFVLCRTIEYFRIPRNVLCVCVGKSTYARCGLIANVTPFEPGWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDE
LPDVAYDDRSGKYQGQTGVTLPRI

Sequences:

>Translated_184_residues
MSIKADRWIKRMAQEHGMIEPFVDGQVRGGVVSYGLSSYGYDIRIADEFKIFTNVNSAIIDPKNFDPRSFVDVKADVCII
PPNSFVLCRTIEYFRIPRNVLCVCVGKSTYARCGLIANVTPFEPGWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDE
LPDVAYDDRSGKYQGQTGVTLPRI
>Mature_183_residues
SIKADRWIKRMAQEHGMIEPFVDGQVRGGVVSYGLSSYGYDIRIADEFKIFTNVNSAIIDPKNFDPRSFVDVKADVCIIP
PNSFVLCRTIEYFRIPRNVLCVCVGKSTYARCGLIANVTPFEPGWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDEL
PDVAYDDRSGKYQGQTGVTLPRI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_HERA2 (A9B2B7)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001544090.1
- ProteinModelPortal:   A9B2B7
- SMR:   A9B2B7
- GeneID:   5733208
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_1314
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- BioCyc:   HAUR316274:HAUR_1314-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 20558; Mature: 20427

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKADRWIKRMAQEHGMIEPFVDGQVRGGVVSYGLSSYGYDIRIADEFKIFTNVNSAII
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCEEEEECCCCEEE
DPKNFDPRSFVDVKADVCIIPPNSFVLCRTIEYFRIPRNVLCVCVGKSTYARCGLIANVT
CCCCCCCCCEEEEECCEEEECCCCEEEEEEHHHHHCCCCEEEEEECCCCCHHCCEEECCC
PFEPGWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDELPDVAYDDRSGKYQGQTGVT
CCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCC
LPRI
CCCC
>Mature Secondary Structure 
SIKADRWIKRMAQEHGMIEPFVDGQVRGGVVSYGLSSYGYDIRIADEFKIFTNVNSAII
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCEEEEECCCCEEE
DPKNFDPRSFVDVKADVCIIPPNSFVLCRTIEYFRIPRNVLCVCVGKSTYARCGLIANVT
CCCCCCCCCEEEEECCEEEECCCCEEEEEEHHHHHCCCCEEEEEECCCCCHHCCEEECCC
PFEPGWEGYVTIEISNTTPLPAKIYANEGIAQVLFFEGDELPDVAYDDRSGKYQGQTGVT
CCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCC
LPRI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA