| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897834
Identifier: 159897834
GI number: 159897834
Start: 1515886
End: 1516632
Strand: Direct
Name: 159897834
Synonym: Haur_1305
Alternate gene names: NA
Gene position: 1515886-1516632 (Clockwise)
Preceding gene: 159897833
Following gene: 159897835
Centisome position: 23.89
GC content: 48.46
Gene sequence:
>747_bases ATGATGTATAACGATTATGCCCGTTACTATGATGACGGGCAACTCCATTTTAGCGTCTTGATGTTTGATTATTTGCAGCG AGTGCTGGAGCGTCATCCCGTTCCTGGCCGTTCGATGATCGATTTAGCCTGCGGTACAGGAACGCTGGCATTATTACACG CCGATTTGGGCTGGGATGTGTTGGGAATCGATGCCTCGCGTGAGATGCTGAAGGTAGCTCAACGCAAAGCCCGTGGTGAT CTGACCCAACAACGCTCAATTCGTTTTCGGCGTGCTGATATGCGCGATTGGCAGGTGAGCCAGCCAGTCCAACTGGTCAC TTGTTTTTACGATAGCCTCAATTATTTGCTCGAAGAAGCTGATCTGGATGCGACATTTGGCTGCGTTGCGGCAGCGCTTG AAGCTGGCGGACGCTGGATTTTCGATATTAACACGCCCTATTTTCTAGAGCATGTTTGGCAGCCAGTCGAAGTTGATGAG CGTGATGGCTATGTCCACATTATGCATTCAGAATTTGAGCCAGAACGTTGTATTTCGTGGTTGCAATTAACTGGTTTTGC CCAACGCAGTGATGGTCTGTTTGAACGATTTAGTGAGCAACATGCCGAACGCGGTTATAGCCAAGCCATATTAGAGCAAC TTTTACAGGCAAACGGGTTTACAATAGAGGCCGTGTACGATTGTTTCGTGCTGACTGAACCAACCCCGATTAGTCATCGG TGGTTGTGGGTATGTACCAAACAATGA
Upstream 100 bases:
>100_bases CGAAGTTGATATTTTGGCGAAATATGTTGAAAATATTGTGCGCTTTGACCGAAAAATGCTGGCCGAGTAAACCGCGCTCG AAATTAGTTGGAATAATTCG
Downstream 100 bases:
>100_bases GCGTTCTCATTGTCACAAAGGAGTGGAATGTATGCCGTTGGCAAGCATCGAAGAAGCACTGCAAGATTATGCAGCCGGAA AAATGGTGATCATCGTAGAC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MMYNDYARYYDDGQLHFSVLMFDYLQRVLERHPVPGRSMIDLACGTGTLALLHADLGWDVLGIDASREMLKVAQRKARGD LTQQRSIRFRRADMRDWQVSQPVQLVTCFYDSLNYLLEEADLDATFGCVAAALEAGGRWIFDINTPYFLEHVWQPVEVDE RDGYVHIMHSEFEPERCISWLQLTGFAQRSDGLFERFSEQHAERGYSQAILEQLLQANGFTIEAVYDCFVLTEPTPISHR WLWVCTKQ
Sequences:
>Translated_248_residues MMYNDYARYYDDGQLHFSVLMFDYLQRVLERHPVPGRSMIDLACGTGTLALLHADLGWDVLGIDASREMLKVAQRKARGD LTQQRSIRFRRADMRDWQVSQPVQLVTCFYDSLNYLLEEADLDATFGCVAAALEAGGRWIFDINTPYFLEHVWQPVEVDE RDGYVHIMHSEFEPERCISWLQLTGFAQRSDGLFERFSEQHAERGYSQAILEQLLQANGFTIEAVYDCFVLTEPTPISHR WLWVCTKQ >Mature_248_residues MMYNDYARYYDDGQLHFSVLMFDYLQRVLERHPVPGRSMIDLACGTGTLALLHADLGWDVLGIDASREMLKVAQRKARGD LTQQRSIRFRRADMRDWQVSQPVQLVTCFYDSLNYLLEEADLDATFGCVAAALEAGGRWIFDINTPYFLEHVWQPVEVDE RDGYVHIMHSEFEPERCISWLQLTGFAQRSDGLFERFSEQHAERGYSQAILEQLLQANGFTIEAVYDCFVLTEPTPISHR WLWVCTKQ
Specific function: May be a S-adenosyl-L-methionine (SAM)-dependent methyltransferase [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013217 [H]
Pfam domain/function: PF08242 Methyltransf_12 [H]
EC number: NA
Molecular weight: Translated: 28818; Mature: 28818
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYNDYARYYDDGQLHFSVLMFDYLQRVLERHPVPGRSMIDLACGTGTLALLHADLGWDV CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCEE LGIDASREMLKVAQRKARGDLTQQRSIRFRRADMRDWQVSQPVQLVTCFYDSLNYLLEEA EECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC DLDATFGCVAAALEAGGRWIFDINTPYFLEHVWQPVEVDERDGYVHIMHSEFEPERCISW CCCHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHH LQLTGFAQRSDGLFERFSEQHAERGYSQAILEQLLQANGFTIEAVYDCFVLTEPTPISHR HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCE WLWVCTKQ EEEEEECC >Mature Secondary Structure MMYNDYARYYDDGQLHFSVLMFDYLQRVLERHPVPGRSMIDLACGTGTLALLHADLGWDV CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCEE LGIDASREMLKVAQRKARGDLTQQRSIRFRRADMRDWQVSQPVQLVTCFYDSLNYLLEEA EECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC DLDATFGCVAAALEAGGRWIFDINTPYFLEHVWQPVEVDERDGYVHIMHSEFEPERCISW CCCHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHH LQLTGFAQRSDGLFERFSEQHAERGYSQAILEQLLQANGFTIEAVYDCFVLTEPTPISHR HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCE WLWVCTKQ EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA