| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897790
Identifier: 159897790
GI number: 159897790
Start: 1470747
End: 1471802
Strand: Reverse
Name: 159897790
Synonym: Haur_1261
Alternate gene names: NA
Gene position: 1471802-1470747 (Counterclockwise)
Preceding gene: 159897800
Following gene: 159897782
Centisome position: 23.19
GC content: 30.59
Gene sequence:
>1056_bases TTGAATAGCATTGCTGCCTATAGCATTTTTGCTTTACGTCGTTTTCGCTATTTCATAGATAATGATAATATTCGCTATTT AATATGCTTAACTATCACATTAGTACCATTTGGTGATTATATTTTGCAAACGAATACTGTTTATTCAATATGGAATAGCC TCTTTATCCTAATTTTACTTATTAGTGTTCCTGTAAGTTCGTCAAAATTAGTCACAATTTTTCAAACAATCATATCATTA TTGATGATCGCATCCCATGGTATGTCCTTCATAATTATACCATTCTGTGCTTATTTTCTATTTACTCGTCCAAAGCTACT TGATAAAATATATAATGGCATATTACTACTTGGCGTTCTATCATATATCATTACAAGTGTTCATCCAATTAAATCGCAAA TGAATTTATCGCCTAAAAGTTTTATTTTCAGCCTTCAATTATTATTCGAAAGAGTATTTTTTGAGGGGTTTTTTGGAAAT ATTTTACGAATTGATTTAGTTAAGCATTATCCTTATATTCCTATATCAATTGGGATAATCATTGGTCTAACTTTAACAGG ATTAATCTATCGCTGGCGAGGCTATCTTCCTAAACCTATAGTAGAACAATTTATAGTAATCGGATTTCTTATTATTGGAT TAACAATTATCCCAACTATTACGCGTAATTTAATTTCCCAAAAAGAACTAATTATGCTTGAACCATGGTCATCAAATCGC TATTTCTATATCCAACATATGTTATTTATTATATTAATCTTAGAGTTATTTTACTTTCGCTTAATGAAATCGTCATTTAC AACCCAAAATCATTCAAATCACACGGTTATCGTCAAGATTACAATAAGTATATGCGTATTTTGGATCATATTTCTCAATA TTAATCATCAAAAAATCTTTTTTGGAACTCCAATCTATAATGGTCGTGAGGTCATTTACTTTCTCAGCTCACTTGATAAA CATATGCACAATCCAGAGAAGGCTCCGCAGCCGATTAAATTAGAGCGAGGCGTATGGTCAATTGTTTATACAGGTTACTC TGCCCTACCAAATTAA
Upstream 100 bases:
>100_bases CTCAGGATATCGATCGATTATCCCCAATTCAATTATTTATCTATCACTTTTTGCACCATTTCTACCTTTATCCCCATATA TAATGATAATTTTTTGTTTC
Downstream 100 bases:
>100_bases CACCCGCTTAGGCTTGCTCATCGTTGCTCTGATCGCTAAAATTGGGCAGATCGCGGCGCGGCTTATGTTCATCGAGGGCA TCCCACACATTTGGGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNSIAAYSIFALRRFRYFIDNDNIRYLICLTITLVPFGDYILQTNTVYSIWNSLFILILLISVPVSSSKLVTIFQTIISL LMIASHGMSFIIIPFCAYFLFTRPKLLDKIYNGILLLGVLSYIITSVHPIKSQMNLSPKSFIFSLQLLFERVFFEGFFGN ILRIDLVKHYPYIPISIGIIIGLTLTGLIYRWRGYLPKPIVEQFIVIGFLIIGLTIIPTITRNLISQKELIMLEPWSSNR YFYIQHMLFIILILELFYFRLMKSSFTTQNHSNHTVIVKITISICVFWIIFLNINHQKIFFGTPIYNGREVIYFLSSLDK HMHNPEKAPQPIKLERGVWSIVYTGYSALPN
Sequences:
>Translated_351_residues MNSIAAYSIFALRRFRYFIDNDNIRYLICLTITLVPFGDYILQTNTVYSIWNSLFILILLISVPVSSSKLVTIFQTIISL LMIASHGMSFIIIPFCAYFLFTRPKLLDKIYNGILLLGVLSYIITSVHPIKSQMNLSPKSFIFSLQLLFERVFFEGFFGN ILRIDLVKHYPYIPISIGIIIGLTLTGLIYRWRGYLPKPIVEQFIVIGFLIIGLTIIPTITRNLISQKELIMLEPWSSNR YFYIQHMLFIILILELFYFRLMKSSFTTQNHSNHTVIVKITISICVFWIIFLNINHQKIFFGTPIYNGREVIYFLSSLDK HMHNPEKAPQPIKLERGVWSIVYTGYSALPN >Mature_351_residues MNSIAAYSIFALRRFRYFIDNDNIRYLICLTITLVPFGDYILQTNTVYSIWNSLFILILLISVPVSSSKLVTIFQTIISL LMIASHGMSFIIIPFCAYFLFTRPKLLDKIYNGILLLGVLSYIITSVHPIKSQMNLSPKSFIFSLQLLFERVFFEGFFGN ILRIDLVKHYPYIPISIGIIIGLTLTGLIYRWRGYLPKPIVEQFIVIGFLIIGLTIIPTITRNLISQKELIMLEPWSSNR YFYIQHMLFIILILELFYFRLMKSSFTTQNHSNHTVIVKITISICVFWIIFLNINHQKIFFGTPIYNGREVIYFLSSLDK HMHNPEKAPQPIKLERGVWSIVYTGYSALPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40814; Mature: 40814
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIAAYSIFALRRFRYFIDNDNIRYLICLTITLVPFGDYILQTNTVYSIWNSLFILILL CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCCHHEECCHHHHHHHHHHHHHHH ISVPVSSSKLVTIFQTIISLLMIASHGMSFIIIPFCAYFLFTRPKLLDKIYNGILLLGVL HHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHH SYIITSVHPIKSQMNLSPKSFIFSLQLLFERVFFEGFFGNILRIDLVKHYPYIPISIGII HHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCCCHHHHHHH IGLTLTGLIYRWRGYLPKPIVEQFIVIGFLIIGLTIIPTITRNLISQKELIMLEPWSSNR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC YFYIQHMLFIILILELFYFRLMKSSFTTQNHSNHTVIVKITISICVFWIIFLNINHQKIF EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEE FGTPIYNGREVIYFLSSLDKHMHNPEKAPQPIKLERGVWSIVYTGYSALPN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECHHCCCC >Mature Secondary Structure MNSIAAYSIFALRRFRYFIDNDNIRYLICLTITLVPFGDYILQTNTVYSIWNSLFILILL CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCCHHEECCHHHHHHHHHHHHHHH ISVPVSSSKLVTIFQTIISLLMIASHGMSFIIIPFCAYFLFTRPKLLDKIYNGILLLGVL HHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHH SYIITSVHPIKSQMNLSPKSFIFSLQLLFERVFFEGFFGNILRIDLVKHYPYIPISIGII HHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCCCHHHHHHH IGLTLTGLIYRWRGYLPKPIVEQFIVIGFLIIGLTIIPTITRNLISQKELIMLEPWSSNR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC YFYIQHMLFIILILELFYFRLMKSSFTTQNHSNHTVIVKITISICVFWIIFLNINHQKIF EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEE FGTPIYNGREVIYFLSSLDKHMHNPEKAPQPIKLERGVWSIVYTGYSALPN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA