| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897782
Identifier: 159897782
GI number: 159897782
Start: 1463338
End: 1464348
Strand: Reverse
Name: 159897782
Synonym: Haur_1253
Alternate gene names: NA
Gene position: 1464348-1463338 (Counterclockwise)
Preceding gene: 159897790
Following gene: 159897781
Centisome position: 23.07
GC content: 46.98
Gene sequence:
>1011_bases ATGATCGAGCTTCCTGATCCACTTGATCAAGCCCCAACCCGCGACATACTCCATCATTATGTTGATGAAGGAATTTTTAA TCGGCCAACGATGAAACGCGCCTTACAACTAAGCGGGTTTACGCCAACGGCCCAAGCTTGGGTGCGCTTTTTCAACCTTA TCTTGCTGGTGCTGGGCGCTGGCTTGGCGGTTTGTGGGGTCTATTTCTTCTTTGCATTCAATTGGGCCAGCATGCATCGC TTCGCCAAATTGGGCCTAGTTGAAGGCGCATTGCTTATTTCGATCGTGGCAGCCTTGTGGTATGGCTTGGAACGAATTCA AGGCAAGATTTTATTAATGGTCAGTGCATGTTTGGTTGGGGCACTCATGGCCCTGTTTGGCCAAATTTATCAAACTGGCG CTGATGCCTACACCCTGTTCTTGAATTGGGCTTTAGTGATCACCGGCTTGGCAATTGCTGGCAATTTTGCGCCGTTATGG CTGCTGTGGTGGGGGCTTTGGAACCTTACGATTGTGCTTTACTACGATCAAACGAGTGATTTTCGCAACACCAACGATTT ATTCGTCTTATTGCTCTTCAATGCCCTGATTTTTGCGCTTGCTGAAGGCCTACGCCAACGCAAATTAGCTTGGCTCCAAA CCAATTGGCTCCATCGGGTACTTGGTTTAGGCCTCCTTTGGGTGCTCAGCTTAATCAGCAATAACTTCGTCGATACGGTA TTCAGCTATGGATCGGACAAACCGAGTATCGCATTATTCTTGCTGTATAGCTTAGCGCTTGTGATGCTAGGATTAATGGG TGCTTACCATTATTTTGTAACGTTTGATGGGCTATTAGCCTTAGCAAGCCTTGGTACAATTTGTTTTTTTGTCGATTGTT GGCTCTTCGAATGGCTTTCATATGATTCTGGAGCGACATTCCTATTTGGTGGCATGATCATTTTGGGTCAAACAGTGGTC TCAATTCTCTGGGTTCGCCAACGCCAACAACTGCTAGGAGGCCATGCATGA
Upstream 100 bases:
>100_bases CTAGAATCACCCTTCAAGTGTACCTTTGGTTACATCCGATAGTAGCCATTGAGGCTTACAATAAGCATAGAACTATTGAG TGATAGAAAGAAAGGCTTGT
Downstream 100 bases:
>100_bases GCACTGCACGTTATAGCTTACGCCAATTGTTCGCCGACCTTGAGCTTGAGCCACCAACATTTGTGCTTACGGCCCAACCA CCGAGCGAAGATCCATGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MIELPDPLDQAPTRDILHHYVDEGIFNRPTMKRALQLSGFTPTAQAWVRFFNLILLVLGAGLAVCGVYFFFAFNWASMHR FAKLGLVEGALLISIVAALWYGLERIQGKILLMVSACLVGALMALFGQIYQTGADAYTLFLNWALVITGLAIAGNFAPLW LLWWGLWNLTIVLYYDQTSDFRNTNDLFVLLLFNALIFALAEGLRQRKLAWLQTNWLHRVLGLGLLWVLSLISNNFVDTV FSYGSDKPSIALFLLYSLALVMLGLMGAYHYFVTFDGLLALASLGTICFFVDCWLFEWLSYDSGATFLFGGMIILGQTVV SILWVRQRQQLLGGHA
Sequences:
>Translated_336_residues MIELPDPLDQAPTRDILHHYVDEGIFNRPTMKRALQLSGFTPTAQAWVRFFNLILLVLGAGLAVCGVYFFFAFNWASMHR FAKLGLVEGALLISIVAALWYGLERIQGKILLMVSACLVGALMALFGQIYQTGADAYTLFLNWALVITGLAIAGNFAPLW LLWWGLWNLTIVLYYDQTSDFRNTNDLFVLLLFNALIFALAEGLRQRKLAWLQTNWLHRVLGLGLLWVLSLISNNFVDTV FSYGSDKPSIALFLLYSLALVMLGLMGAYHYFVTFDGLLALASLGTICFFVDCWLFEWLSYDSGATFLFGGMIILGQTVV SILWVRQRQQLLGGHA >Mature_336_residues MIELPDPLDQAPTRDILHHYVDEGIFNRPTMKRALQLSGFTPTAQAWVRFFNLILLVLGAGLAVCGVYFFFAFNWASMHR FAKLGLVEGALLISIVAALWYGLERIQGKILLMVSACLVGALMALFGQIYQTGADAYTLFLNWALVITGLAIAGNFAPLW LLWWGLWNLTIVLYYDQTSDFRNTNDLFVLLLFNALIFALAEGLRQRKLAWLQTNWLHRVLGLGLLWVLSLISNNFVDTV FSYGSDKPSIALFLLYSLALVMLGLMGAYHYFVTFDGLLALASLGTICFFVDCWLFEWLSYDSGATFLFGGMIILGQTVV SILWVRQRQQLLGGHA
Specific function: Unknown
COG id: COG4984
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37735; Mature: 37735
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELPDPLDQAPTRDILHHYVDEGIFNRPTMKRALQLSGFTPTAQAWVRFFNLILLVLGA CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GLAVCGVYFFFAFNWASMHRFAKLGLVEGALLISIVAALWYGLERIQGKILLMVSACLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALMALFGQIYQTGADAYTLFLNWALVITGLAIAGNFAPLWLLWWGLWNLTIVLYYDQTSD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCC FRNTNDLFVLLLFNALIFALAEGLRQRKLAWLQTNWLHRVLGLGLLWVLSLISNNFVDTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH FSYGSDKPSIALFLLYSLALVMLGLMGAYHYFVTFDGLLALASLGTICFFVDCWLFEWLS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YDSGATFLFGGMIILGQTVVSILWVRQRQQLLGGHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIELPDPLDQAPTRDILHHYVDEGIFNRPTMKRALQLSGFTPTAQAWVRFFNLILLVLGA CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GLAVCGVYFFFAFNWASMHRFAKLGLVEGALLISIVAALWYGLERIQGKILLMVSACLVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALMALFGQIYQTGADAYTLFLNWALVITGLAIAGNFAPLWLLWWGLWNLTIVLYYDQTSD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCC FRNTNDLFVLLLFNALIFALAEGLRQRKLAWLQTNWLHRVLGLGLLWVLSLISNNFVDTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH FSYGSDKPSIALFLLYSLALVMLGLMGAYHYFVTFDGLLALASLGTICFFVDCWLFEWLS HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YDSGATFLFGGMIILGQTVVSILWVRQRQQLLGGHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA