The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897780

Identifier: 159897780

GI number: 159897780

Start: 1461801

End: 1462283

Strand: Reverse

Name: 159897780

Synonym: Haur_1251

Alternate gene names: NA

Gene position: 1462283-1461801 (Counterclockwise)

Preceding gene: 159897781

Following gene: 159897770

Centisome position: 23.04

GC content: 45.34

Gene sequence:

>483_bases
ATGAGTATTCGTTATGGCTTAATTATCCTCAGTTTGGTGGCTTGTTTGGGCTTGGTTAATTTCAGCGTGGTACAACGCGA
AGCAATAATCAATACAGGGCGGGTGGTCTACCTCGAATTAATGCCAGTTGATCCACGCTCGTTGCTGCAAGGCGATTATA
TGGAGTTATATTACAATACCTTTCCACGGGGCTATAATCGCAACATTCCATCGCGTGGCACCGTGGTTCTGACAATTGAT
CAGCAGAATATTGGTACATTTTCGCATTTTGAAACAAGTGAACAAGCCTTGGCAGCAAATCAACAACGGCTTAAATATCG
CTCGCGAGGTTATGATGTGCAGCTTGCAGCAAACACATTCTTCTTCCAAGAGGGCACGGGTGAGCGTTTTAATCAGGCTC
GTTATGCCGAGTTGCATATCAACGAAGCAGGCGAGATGGCCTTGGTTGGCTTGCGCGATAAGGATTTGAACTTGATTAAG
TAG

Upstream 100 bases:

>100_bases
ATATTTCATTGCTCTACAAATCAATCATCTTATTTGGCACTGGAATGATGTTGCTGGCAATTCGGGCATTGGTGCTGAAA
TTGAATCAAAAGGAAGCTGT

Downstream 100 bases:

>100_bases
CCAATAACCTTGCCGCATCCCTGCTTTCAAGGGTCGGTTTTTAACCATGATTAATGGAAATTCACCGTCGATTGGCATGC
CCTCACCCCCTAGCCCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNTFPRGYNRNIPSRGTVVLTID
QQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTFFFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK

Sequences:

>Translated_160_residues
MSIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNTFPRGYNRNIPSRGTVVLTID
QQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTFFFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK
>Mature_159_residues
SIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNTFPRGYNRNIPSRGTVVLTIDQ
QNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTFFFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18232; Mature: 18101

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCCHHEEHHHC
FPRGYNRNIPSRGTVVLTIDQQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTF
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEE
FFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK
EEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCCHHEEHHHC
FPRGYNRNIPSRGTVVLTIDQQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTF
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEE
FFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK
EEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA