| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897780
Identifier: 159897780
GI number: 159897780
Start: 1461801
End: 1462283
Strand: Reverse
Name: 159897780
Synonym: Haur_1251
Alternate gene names: NA
Gene position: 1462283-1461801 (Counterclockwise)
Preceding gene: 159897781
Following gene: 159897770
Centisome position: 23.04
GC content: 45.34
Gene sequence:
>483_bases ATGAGTATTCGTTATGGCTTAATTATCCTCAGTTTGGTGGCTTGTTTGGGCTTGGTTAATTTCAGCGTGGTACAACGCGA AGCAATAATCAATACAGGGCGGGTGGTCTACCTCGAATTAATGCCAGTTGATCCACGCTCGTTGCTGCAAGGCGATTATA TGGAGTTATATTACAATACCTTTCCACGGGGCTATAATCGCAACATTCCATCGCGTGGCACCGTGGTTCTGACAATTGAT CAGCAGAATATTGGTACATTTTCGCATTTTGAAACAAGTGAACAAGCCTTGGCAGCAAATCAACAACGGCTTAAATATCG CTCGCGAGGTTATGATGTGCAGCTTGCAGCAAACACATTCTTCTTCCAAGAGGGCACGGGTGAGCGTTTTAATCAGGCTC GTTATGCCGAGTTGCATATCAACGAAGCAGGCGAGATGGCCTTGGTTGGCTTGCGCGATAAGGATTTGAACTTGATTAAG TAG
Upstream 100 bases:
>100_bases ATATTTCATTGCTCTACAAATCAATCATCTTATTTGGCACTGGAATGATGTTGCTGGCAATTCGGGCATTGGTGCTGAAA TTGAATCAAAAGGAAGCTGT
Downstream 100 bases:
>100_bases CCAATAACCTTGCCGCATCCCTGCTTTCAAGGGTCGGTTTTTAACCATGATTAATGGAAATTCACCGTCGATTGGCATGC CCTCACCCCCTAGCCCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNTFPRGYNRNIPSRGTVVLTID QQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTFFFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK
Sequences:
>Translated_160_residues MSIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNTFPRGYNRNIPSRGTVVLTID QQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTFFFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK >Mature_159_residues SIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNTFPRGYNRNIPSRGTVVLTIDQ QNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTFFFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK
Specific function: Unknown
COG id: COG4929
COG function: function code S; Uncharacterized membrane-anchored protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18232; Mature: 18101
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCCHHEEHHHC FPRGYNRNIPSRGTVVLTIDQQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTF CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEE FFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK EEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC >Mature Secondary Structure SIRYGLIILSLVACLGLVNFSVVQREAIINTGRVVYLELMPVDPRSLLQGDYMELYYNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHCCCHHEEHHHC FPRGYNRNIPSRGTVVLTIDQQNIGTFSHFETSEQALAANQQRLKYRSRGYDVQLAANTF CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEE FFQEGTGERFNQARYAELHINEAGEMALVGLRDKDLNLIK EEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA