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The map label for this gene is ynjF [H]

Identifier: 159897767

GI number: 159897767

Start: 1442169

End: 1442798

Strand: Reverse

Name: ynjF [H]

Synonym: Haur_1238

Alternate gene names: 159897767

Gene position: 1442798-1442169 (Counterclockwise)

Preceding gene: 159897768

Following gene: 159897766

Centisome position: 22.73

GC content: 51.59

Gene sequence:

>630_bases
ATGGTCGATCAGTTTTTACGCCAACCCAAAGAGCAATTATTAGCCCCAATCGCCCAACGGCTCCAGCGTGTACACCCAAC
TACTATCACTTTGGCAGCCTTTGGTTGCGGCTTAGCAGCAGCAATCTGCGCTTGGCAACAAGCGTATTGGGTCAGCTTTG
GCTGTTGGCTACTCAATCGGCTACTCGATGGGCTTGATGGCACAGTGGCGCGGCTGAGCAACCAGCAAAGCGATTTAGGT
GGCTACATCGATATTCTGCTTGATGTGATTATTTATGCGTTGCTACCAATTGGCTTGGTGGCGGGACAACCAACGCTTGG
CAACGCCTTGGCCGCTGTTGGCCTGATCAGCAGCTTTTATGTCAATGCAATTTCGTGGGCCTATTTGGCAGCAATTTTAG
AAAAACGCCAACAAGGCGCTAAAGCCCAAGCCGCCATGACCAGCATTGCCATGCCCAGTGGCTTGATCGAAGGCACTGAA
ACAGTATTGTTCTTCAGTTTGTTTATTGCGCTCCCCAACCACCTGAGCCGCTTATTTCAGCTGATGACGGCCTTAGTTGT
CGTTACGATTGGCCAGCGCTTGCTTTGGGCCAAACGCTATCTTCGCGAGGAACCACGCCATGACCACTAG

Upstream 100 bases:

>100_bases
CGTGGGTAAGGGCATGCAATCGATAGATCATCAACTGTTAAGAATTTAGCCTCAATCTTTAAGCTACGATAGCTTCGATC
GTTACAAGGAGCTATAGGCG

Downstream 100 bases:

>100_bases
CACATCAACATCGACCAAATCGTTTTGGCAACGCCATTGGCAAAAATTGCTCGCTGCGGGGTTTTGGGTGTTGCTGGTGG
GCGGCTATCTCTGGTATTCA

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MVDQFLRQPKEQLLAPIAQRLQRVHPTTITLAAFGCGLAAAICAWQQAYWVSFGCWLLNRLLDGLDGTVARLSNQQSDLG
GYIDILLDVIIYALLPIGLVAGQPTLGNALAAVGLISSFYVNAISWAYLAAILEKRQQGAKAQAAMTSIAMPSGLIEGTE
TVLFFSLFIALPNHLSRLFQLMTALVVVTIGQRLLWAKRYLREEPRHDH

Sequences:

>Translated_209_residues
MVDQFLRQPKEQLLAPIAQRLQRVHPTTITLAAFGCGLAAAICAWQQAYWVSFGCWLLNRLLDGLDGTVARLSNQQSDLG
GYIDILLDVIIYALLPIGLVAGQPTLGNALAAVGLISSFYVNAISWAYLAAILEKRQQGAKAQAAMTSIAMPSGLIEGTE
TVLFFSLFIALPNHLSRLFQLMTALVVVTIGQRLLWAKRYLREEPRHDH
>Mature_209_residues
MVDQFLRQPKEQLLAPIAQRLQRVHPTTITLAAFGCGLAAAICAWQQAYWVSFGCWLLNRLLDGLDGTVARLSNQQSDLG
GYIDILLDVIIYALLPIGLVAGQPTLGNALAAVGLISSFYVNAISWAYLAAILEKRQQGAKAQAAMTSIAMPSGLIEGTE
TVLFFSLFIALPNHLSRLFQLMTALVVVTIGQRLLWAKRYLREEPRHDH

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=196, Percent_Identity=34.1836734693878, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22960; Mature: 22960

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDQFLRQPKEQLLAPIAQRLQRVHPTTITLAAFGCGLAAAICAWQQAYWVSFGCWLLNR
CCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDGLDGTVARLSNQQSDLGGYIDILLDVIIYALLPIGLVAGQPTLGNALAAVGLISSFY
HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VNAISWAYLAAILEKRQQGAKAQAAMTSIAMPSGLIEGTETVLFFSLFIALPNHLSRLFQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTALVVVTIGQRLLWAKRYLREEPRHDH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVDQFLRQPKEQLLAPIAQRLQRVHPTTITLAAFGCGLAAAICAWQQAYWVSFGCWLLNR
CCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDGLDGTVARLSNQQSDLGGYIDILLDVIIYALLPIGLVAGQPTLGNALAAVGLISSFY
HHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VNAISWAYLAAILEKRQQGAKAQAAMTSIAMPSGLIEGTETVLFFSLFIALPNHLSRLFQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTALVVVTIGQRLLWAKRYLREEPRHDH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]