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The map label for this gene is ytxB [H]

Identifier: 159897766

GI number: 159897766

Start: 1441469

End: 1442179

Strand: Reverse

Name: ytxB [H]

Synonym: Haur_1237

Alternate gene names: 159897766

Gene position: 1442179-1441469 (Counterclockwise)

Preceding gene: 159897767

Following gene: 159897765

Centisome position: 22.72

GC content: 49.37

Gene sequence:

>711_bases
ATGACCACTAGCACATCAACATCGACCAAATCGTTTTGGCAACGCCATTGGCAAAAATTGCTCGCTGCGGGGTTTTGGGT
GTTGCTGGTGGGCGGCTATCTCTGGTATTCATGGCGCAATCAGCTTTCACCAGCGGCGGCAGTTGGTCAATTAATCGAGC
TGCTCAAAAGCGATGTGGGTGTATTGATTTATATTGGCGTGTACCTATTGCGCCCGTTGATTTTCTTCCCAGCGACATTT
TTGACGCTTGCTGGCGGCAGTGTCTTTGGCAGTGTTTGGGGTTTGATTTACACCGTGATTGGGGCCAATGGCTCGGCGCT
GGTGGCCTATACGATTGGGCGGTTTTTCGGCCAGCCCGAACAAAACCAAAATCAAACCGGCCTCGTAAATGGCTATATCG
AGCGTTTACGCCGCAACAGCTTTGAAACAATTATGTTGATGCGCTTGATCTTTTTGCCCTACGATTTAGTAAATTATCTG
GCGGGTATTTTACGGATCAACTGGAAGCAATTTTTGTTGGCAACCATGCTTGGATCGTTTCCTGGCACGCTAACCTTTGT
GCTGTTTGGGGCATCGTTCGAGGGCGATTTTGCCAAAGCTGAGTTTTCGTTCAATCCATGGGCCTTTGCTGGCTCGATCG
TTATTTTTATCATCAGTATCGCGATTTCGCGCTGGCTTAAGCGCCGTGAAGCCGCTAAACCAGCGGCCTAG

Upstream 100 bases:

>100_bases
CACCTGAGCCGCTTATTTCAGCTGATGACGGCCTTAGTTGTCGTTACGATTGGCCAGCGCTTGCTTTGGGCCAAACGCTA
TCTTCGCGAGGAACCACGCC

Downstream 100 bases:

>100_bases
CCGAGGGTAAACACACACTTATGCAAGCAACAGCACGCAAACGGATTTGGAATTTGGGTTTGTTAATTGGCCTTCTGAGC
CTGATTATCGCCAGTTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-213 [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTTSTSTSTKSFWQRHWQKLLAAGFWVLLVGGYLWYSWRNQLSPAAAVGQLIELLKSDVGVLIYIGVYLLRPLIFFPATF
LTLAGGSVFGSVWGLIYTVIGANGSALVAYTIGRFFGQPEQNQNQTGLVNGYIERLRRNSFETIMLMRLIFLPYDLVNYL
AGILRINWKQFLLATMLGSFPGTLTFVLFGASFEGDFAKAEFSFNPWAFAGSIVIFIISIAISRWLKRREAAKPAA

Sequences:

>Translated_236_residues
MTTSTSTSTKSFWQRHWQKLLAAGFWVLLVGGYLWYSWRNQLSPAAAVGQLIELLKSDVGVLIYIGVYLLRPLIFFPATF
LTLAGGSVFGSVWGLIYTVIGANGSALVAYTIGRFFGQPEQNQNQTGLVNGYIERLRRNSFETIMLMRLIFLPYDLVNYL
AGILRINWKQFLLATMLGSFPGTLTFVLFGASFEGDFAKAEFSFNPWAFAGSIVIFIISIAISRWLKRREAAKPAA
>Mature_235_residues
TTSTSTSTKSFWQRHWQKLLAAGFWVLLVGGYLWYSWRNQLSPAAAVGQLIELLKSDVGVLIYIGVYLLRPLIFFPATFL
TLAGGSVFGSVWGLIYTVIGANGSALVAYTIGRFFGQPEQNQNQTGLVNGYIERLRRNSFETIMLMRLIFLPYDLVNYLA
GILRINWKQFLLATMLGSFPGTLTFVLFGASFEGDFAKAEFSFNPWAFAGSIVIFIISIAISRWLKRREAAKPAA

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=220, Percent_Identity=29.5454545454545, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26393; Mature: 26262

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTSTSTKSFWQRHWQKLLAAGFWVLLVGGYLWYSWRNQLSPAAAVGQLIELLKSDVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
VLIYIGVYLLRPLIFFPATFLTLAGGSVFGSVWGLIYTVIGANGSALVAYTIGRFFGQPE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
QNQNQTGLVNGYIERLRRNSFETIMLMRLIFLPYDLVNYLAGILRINWKQFLLATMLGSF
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGTLTFVLFGASFEGDFAKAEFSFNPWAFAGSIVIFIISIAISRWLKRREAAKPAA
CHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TTSTSTSTKSFWQRHWQKLLAAGFWVLLVGGYLWYSWRNQLSPAAAVGQLIELLKSDVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
VLIYIGVYLLRPLIFFPATFLTLAGGSVFGSVWGLIYTVIGANGSALVAYTIGRFFGQPE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
QNQNQTGLVNGYIERLRRNSFETIMLMRLIFLPYDLVNYLAGILRINWKQFLLATMLGSF
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGTLTFVLFGASFEGDFAKAEFSFNPWAFAGSIVIFIISIAISRWLKRREAAKPAA
CHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377 [H]